Coordinate-aware organelle record

Paraphlomis javanica var. pteropoda chloroplast genome

Available OR565943.1 152,203 bp 132 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	1	76	75
psbA	gene	photosystem-ii	−	306	1365	1059
trnK-UUU	gene	translation-rna	−	1597	4189	2592
matK	gene	other	−	1904	3440	1536
rps16	gene	ribosomal-protein	−	5099	6240	1141
trnQ-UUG	gene	translation-rna	−	7183	7256	73
psbK	gene	photosystem-ii	+	7592	7778	186
psbI	gene	photosystem-ii	+	8154	8265	111
trnS-GCU	gene	translation-rna	−	8388	8476	88
trnG-UCC	gene	translation-rna	+	9169	9929	760
trnR-UCU	gene	translation-rna	+	10105	10177	72
atpA	gene	atp-synthase	−	10273	11797	1524
atpF	gene	atp-synthase	−	11884	13106	1222
atpH	gene	atp-synthase	−	13476	13722	246
atpI	gene	atp-synthase	−	14721	15465	744
rps2	gene	ribosomal-protein	−	15695	16406	711
rpoC2	gene	rna-polymerase	−	16705	20815	4110
rpoC1	gene	rna-polymerase	−	20969	23800	2831
rpoB	gene	rna-polymerase	−	23826	27039	3213
trnC-GCA	gene	translation-rna	+	28140	28216	76
petN	gene	cytochrome	+	29046	29142	96
psbM	gene	photosystem-ii	−	29934	30039	105
trnD-GUC	gene	translation-rna	−	30562	30636	74
trnY-GUA	gene	translation-rna	−	30750	30834	84
trnE-UUC	gene	translation-rna	−	30893	30963	70
trnT-GGU	gene	translation-rna	+	31536	31607	71
psbD	gene	photosystem-ii	+	32858	33920	1062
psbC	gene	photosystem-ii	+	33867	35289	1422
trnS-UGA	gene	translation-rna	−	35519	35612	93
psbZ	gene	photosystem-ii	+	35936	36125	189
trnG-GCC	gene	translation-rna	+	36354	36425	71
trnfM-CAU	gene	translation-rna	−	36574	36648	74
rps14	gene	ribosomal-protein	−	36797	37100	303
psaB	gene	photosystem-i	−	37227	39432	2205
psaA	gene	photosystem-i	−	39457	41710	2253
ycf3	gene	other	−	42437	44394	1957
trnS-GGA	gene	translation-rna	+	44723	44810	87
rps4	gene	ribosomal-protein	−	45108	45714	606
trnT-UGU	gene	translation-rna	−	46104	46177	73
trnL-UAA	gene	translation-rna	+	46854	47428	574
trnF-GAA	gene	translation-rna	+	47719	47792	73
ndhJ	gene	nad-dehydrogenase	−	48454	48931	477
ndhK	gene	nad-dehydrogenase	−	49031	49709	678
ndhC	gene	nad-dehydrogenase	−	49762	50125	363
trnV-UAC	gene	translation-rna	−	51091	51738	647
trnM-CAU	gene	translation-rna	+	51927	51999	72
atpE	gene	atp-synthase	−	52216	52618	402
atpB	gene	atp-synthase	−	52614	54111	1497
rbcL	gene	other	+	54893	56369	1476
accD	gene	other	+	57058	58525	1467
psaI	gene	photosystem-i	+	59211	59322	111
ycf4	gene	other	+	59757	60312	555
cemA	gene	other	+	60879	61569	690
petA	gene	cytochrome	+	61785	62748	963
psbJ	gene	photosystem-ii	−	63792	63915	123
psbL	gene	photosystem-ii	−	64052	64169	117
psbF	gene	photosystem-ii	−	64192	64312	120
psbE	gene	photosystem-ii	−	64326	64578	252
petL	gene	cytochrome	+	65505	65601	96
petG	gene	cytochrome	+	65775	65889	114
trnW-CCA	gene	translation-rna	−	66014	66088	74
trnP-UGG	gene	translation-rna	−	66257	66331	74
psaJ	gene	photosystem-i	+	66605	66740	135
rpl33	gene	ribosomal-protein	+	67212	67413	201
rps18	gene	ribosomal-protein	+	67559	67865	306
rpl20	gene	ribosomal-protein	−	68044	68431	387
rps12	gene	ribosomal-protein	−	69197	97352	28155
rps12	gene	ribosomal-protein	+	69197	138945	69748
clpP	gene	other	−	69437	71304	1867
psbB	gene	photosystem-ii	+	71741	73268	1527
psbT	gene	photosystem-ii	+	73462	73570	108
psbN	gene	photosystem-ii	−	73630	73762	132
psbH	gene	photosystem-ii	+	73865	74087	222
petB	gene	cytochrome	+	74211	75591	1380
petD	gene	cytochrome	+	75785	77007	1222
rpoA	gene	rna-polymerase	−	77169	78183	1014
rps11	gene	ribosomal-protein	−	78254	78686	432
rpl36	gene	ribosomal-protein	−	78773	78887	114
infA	gene	other	−	78982	79216	234
rps8	gene	ribosomal-protein	−	79340	79754	414
rpl14	gene	ribosomal-protein	−	79944	80313	369
rpl16	gene	ribosomal-protein	−	80439	81746	1307
rps3	gene	ribosomal-protein	−	81892	82555	663
rpl22	gene	ribosomal-protein	−	82539	83004	465
rps19	gene	ribosomal-protein	−	83063	83342	279
rpl2	gene	ribosomal-protein	−	83394	84886	1492
rpl23	gene	ribosomal-protein	−	84904	85186	282
trnI-CAU	gene	translation-rna	−	85351	85425	74
ycf2	gene	other	+	85513	92380	6867
ycf15	gene	other	+	92422	92671	249
trnL-CAA	gene	translation-rna	−	92931	93012	81
ndhB	gene	nad-dehydrogenase	−	93551	95763	2212
rps7	gene	ribosomal-protein	−	96037	96505	468
trnV-GAC	gene	translation-rna	+	98968	99040	72
rrn16	gene	ribosomal-rna	+	99267	100758	1491
trnI-GAU	gene	translation-rna	+	101047	102056	1009
trnA-UGC	gene	translation-rna	+	102120	102999	879
rrn23	gene	ribosomal-rna	+	103191	106001	2810
rrn4.5	gene	ribosomal-rna	+	106099	106202	103
rrn5	gene	ribosomal-rna	+	106457	106578	121
trnR-ACG	gene	translation-rna	+	106812	106886	74
trnN-GUU	gene	translation-rna	−	107452	107524	72
ndhF	gene	nad-dehydrogenase	−	108913	111136	2223
rpl32	gene	ribosomal-protein	+	111640	111817	177
trnL-UAG	gene	translation-rna	+	112540	112620	80
ccsA	gene	other	+	112704	113676	972
ndhD	gene	nad-dehydrogenase	−	113858	115379	1521
psaC	gene	photosystem-i	−	115477	115723	246
ndhE	gene	nad-dehydrogenase	−	115985	116291	306
ndhG	gene	nad-dehydrogenase	−	116512	117043	531
ndhI	gene	nad-dehydrogenase	−	117421	117919	498
ndhA	gene	nad-dehydrogenase	−	118005	120165	2160
ndhH	gene	nad-dehydrogenase	−	120166	121348	1182
rps15	gene	ribosomal-protein	−	121448	121784	336
ycf1	gene	other	−	122101	127654	5553
trnN-GUU	gene	translation-rna	+	127979	128051	72
trnR-ACG	gene	translation-rna	−	128617	128691	74
rrn5	gene	ribosomal-rna	−	128925	129046	121
rrn4.5	gene	ribosomal-rna	−	129301	129404	103
rrn23	gene	ribosomal-rna	−	129502	132312	2810
trnA-UGC	gene	translation-rna	−	132504	133383	879
trnI-GAU	gene	translation-rna	−	133447	134456	1009
rrn16	gene	ribosomal-rna	−	134745	136236	1491
trnV-GAC	gene	translation-rna	−	136463	136535	72
rps7	gene	ribosomal-protein	+	138998	139466	468
ndhB	gene	nad-dehydrogenase	+	139740	141952	2212
trnL-CAA	gene	translation-rna	+	142491	142572	81
ycf15	gene	other	−	142832	143096	264
ycf2	gene	other	−	143123	149990	6867
trnI-CAU	gene	translation-rna	+	150078	150152	74
rpl23	gene	ribosomal-protein	+	150317	150599	282
rpl2	gene	ribosomal-protein	+	150617	152109	1492

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeOR565943.1DNA · accDOR565943DNA · atpBOR565943DNA · matKOR565943DNA · ndhFOR565943DNA · psbAOR565943DNA · rbcLOR565943DNA · rps12OR565943DNA · ycf1OR565943