Coordinate-aware organelle record

Paraphlomis javanica chloroplast genome

Available NC_085355.1 152,227 bp 132 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	0	72	72
psbA	gene	photosystem-ii	−	304	1363	1059
trnK-UUU	gene	translation-rna	−	1595	4186	2591
matK	gene	other	−	1901	3437	1536
rps16	gene	ribosomal-protein	−	5111	6252	1141
trnQ-UUG	gene	translation-rna	−	7199	7271	72
psbK	gene	photosystem-ii	+	7607	7793	186
psbI	gene	photosystem-ii	+	8168	8279	111
trnS-GCU	gene	translation-rna	−	8403	8491	88
trnG-UCC	gene	translation-rna	+	9182	9942	760
trnR-UCU	gene	translation-rna	+	10118	10190	72
atpA	gene	atp-synthase	−	10286	11810	1524
atpF	gene	atp-synthase	−	11897	13120	1223
atpH	gene	atp-synthase	−	13489	13735	246
atpI	gene	atp-synthase	−	14735	15479	744
rps2	gene	ribosomal-protein	−	15709	16420	711
rpoC2	gene	rna-polymerase	−	16719	20829	4110
rpoC1	gene	rna-polymerase	−	20983	23815	2832
rpoB	gene	rna-polymerase	−	23841	27054	3213
trnC-GCA	gene	translation-rna	+	28155	28226	71
petN	gene	cytochrome	+	29067	29157	90
psbM	gene	photosystem-ii	−	29944	30049	105
trnD-GUC	gene	translation-rna	−	30572	30646	74
trnY-GUA	gene	translation-rna	−	30760	30844	84
trnE-UUC	gene	translation-rna	−	30903	30976	73
trnT-GGU	gene	translation-rna	+	31535	31607	72
psbD	gene	photosystem-ii	+	32856	33918	1062
psbC	gene	photosystem-ii	+	33865	35287	1422
trnS-UGA	gene	translation-rna	−	35517	35610	93
psbZ	gene	photosystem-ii	+	35934	36123	189
trnG-GCC	gene	translation-rna	+	36352	36423	71
trnfM-CAU	gene	translation-rna	−	36572	36646	74
rps14	gene	ribosomal-protein	−	36795	37098	303
psaB	gene	photosystem-i	−	37225	39430	2205
psaA	gene	photosystem-i	−	39455	41708	2253
ycf3	gene	other	−	42435	44392	1957
trnS-GGA	gene	translation-rna	+	44721	44808	87
rps4	gene	ribosomal-protein	−	45106	45712	606
trnT-UGU	gene	translation-rna	−	46102	46175	73
trnL-UAA	gene	translation-rna	+	46868	47442	574
trnF-GAA	gene	translation-rna	+	47733	47806	73
ndhJ	gene	nad-dehydrogenase	−	48468	48945	477
ndhK	gene	nad-dehydrogenase	−	49045	49807	762
ndhC	gene	nad-dehydrogenase	−	49776	50139	363
trnV-UAC	gene	translation-rna	−	51104	51751	647
trnM-CAU	gene	translation-rna	+	51939	52012	73
atpE	gene	atp-synthase	−	52229	52631	402
atpB	gene	atp-synthase	−	52627	54124	1497
rbcL	gene	other	+	54906	56382	1476
accD	gene	other	+	57071	58538	1467
psaI	gene	photosystem-i	+	59224	59335	111
ycf4	gene	other	+	59770	60325	555
cemA	gene	other	+	60892	61582	690
petA	gene	cytochrome	+	61798	62761	963
psbJ	gene	photosystem-ii	−	63805	63928	123
psbL	gene	photosystem-ii	−	64065	64182	117
psbF	gene	photosystem-ii	−	64205	64325	120
psbE	gene	photosystem-ii	−	64339	64591	252
petL	gene	cytochrome	+	65518	65614	96
petG	gene	cytochrome	+	65788	65902	114
trnW-CCA	gene	translation-rna	−	66027	66101	74
trnP-UGG	gene	translation-rna	−	66270	66344	74
psaJ	gene	photosystem-i	+	66618	66753	135
rpl33	gene	ribosomal-protein	+	67225	67426	201
rps18	gene	ribosomal-protein	+	67572	67878	306
rpl20	gene	ribosomal-protein	−	68057	68444	387
rps12	gene	ribosomal-protein	−	69210	97360	28150
rps12	gene	ribosomal-protein	+	69210	138966	69756
clpP	gene	other	−	69450	71315	1865
psbB	gene	photosystem-ii	+	71752	73279	1527
psbT	gene	photosystem-ii	+	73472	73580	108
psbN	gene	photosystem-ii	−	73640	73772	132
psbH	gene	photosystem-ii	+	73875	74097	222
petB	gene	cytochrome	+	74221	75600	1379
petD	gene	cytochrome	+	75794	77016	1222
rpoA	gene	rna-polymerase	−	77178	78192	1014
rps11	gene	ribosomal-protein	−	78263	78695	432
rpl36	gene	ribosomal-protein	−	78782	78896	114
infA	gene	other	−	78991	79225	234
rps8	gene	ribosomal-protein	−	79348	79762	414
rpl14	gene	ribosomal-protein	−	79952	80321	369
rpl16	gene	ribosomal-protein	−	80447	81754	1307
rps3	gene	ribosomal-protein	−	81900	82563	663
rpl22	gene	ribosomal-protein	−	82547	83012	465
rps19	gene	ribosomal-protein	−	83071	83344	273
rpl2	gene	ribosomal-protein	−	83402	84894	1492
rpl23	gene	ribosomal-protein	−	84912	85194	282
trnI-CAU	gene	translation-rna	−	85359	85433	74
ycf2	gene	other	+	85521	92388	6867
ycf15	gene	other	+	92481	92679	198
trnL-CAA	gene	translation-rna	−	92939	93020	81
ndhB	gene	nad-dehydrogenase	−	93559	95717	2158
rps7	gene	ribosomal-protein	−	96045	96513	468
trnV-GAC	gene	translation-rna	+	98976	99048	72
rrn16	gene	ribosomal-rna	+	99275	100766	1491
trnI-GAU	gene	translation-rna	+	101055	102064	1009
trnA-UGC	gene	translation-rna	+	102128	103007	879
rrn23	gene	ribosomal-rna	+	103198	106007	2809
rrn4.5	gene	ribosomal-rna	+	106107	106210	103
rrn5	gene	ribosomal-rna	+	106465	106586	121
trnR-ACG	gene	translation-rna	+	106820	106894	74
trnN-GUU	gene	translation-rna	−	107460	107532	72
ndhF	gene	nad-dehydrogenase	−	108921	111144	2223
rpl32	gene	ribosomal-protein	+	111648	111825	177
trnL-UAG	gene	translation-rna	+	112567	112647	80
ccsA	gene	other	+	112731	113703	972
ndhD	gene	nad-dehydrogenase	−	113885	115388	1503
psaC	gene	photosystem-i	−	115504	115750	246
ndhE	gene	nad-dehydrogenase	−	116012	116315	303
ndhG	gene	nad-dehydrogenase	−	116539	117070	531
ndhI	gene	nad-dehydrogenase	−	117448	117946	498
ndhA	gene	nad-dehydrogenase	−	118026	120186	2160
ndhH	gene	nad-dehydrogenase	−	120187	121369	1182
rps15	gene	ribosomal-protein	−	121469	121805	336
ycf1	gene	other	−	122122	127675	5553
trnN-GUU	gene	translation-rna	+	128000	128072	72
trnR-ACG	gene	translation-rna	−	128638	128712	74
rrn5	gene	ribosomal-rna	−	128946	129067	121
rrn4.5	gene	ribosomal-rna	−	129322	129425	103
rrn23	gene	ribosomal-rna	−	129525	132334	2809
trnA-UGC	gene	translation-rna	−	132525	133404	879
trnI-GAU	gene	translation-rna	−	133468	134477	1009
rrn16	gene	ribosomal-rna	−	134766	136257	1491
trnV-GAC	gene	translation-rna	−	136484	136556	72
rps7	gene	ribosomal-protein	+	139019	139487	468
ndhB	gene	nad-dehydrogenase	+	139815	141973	2158
trnL-CAA	gene	translation-rna	+	142512	142593	81
ycf15	gene	other	−	142853	143051	198
ycf2	gene	other	−	143144	150011	6867
trnI-CAU	gene	translation-rna	+	150099	150173	74
rpl23	gene	ribosomal-protein	+	150338	150620	282
rpl2	gene	ribosomal-protein	+	150638	152130	1492

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_085355.1DNA · accDNC_085355DNA · atpBNC_085355DNA · matKNC_085355DNA · ndhFNC_085355DNA · psbANC_085355DNA · rbcLNC_085355DNA · rps12NC_085355DNA · ycf1NC_085355