Paraphlomis koreana chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · NC_058605.1 · 2–76 bp · −
psbA · NC_058605.1 · 316–1,374 bp · −
trnK-UUU · NC_058605.1 · 1,607–4,195 bp · −
matK · NC_058605.1 · 1,912–3,447 bp · −
rps16 · NC_058605.1 · 5,017–6,158 bp · −
trnQ-UUG · NC_058605.1 · 7,106–7,177 bp · −
trnS-GCU · NC_058605.1 · 8,310–8,397 bp · −
atpA · NC_058605.1 · 10,186–11,709 bp · −
atpF · NC_058605.1 · 11,797–13,015 bp · −
atpH · NC_058605.1 · 13,383–13,628 bp · −
atpI · NC_058605.1 · 14,628–15,371 bp · −
rps2 · NC_058605.1 · 15,602–16,312 bp · −
rpoC2 · NC_058605.1 · 16,612–20,721 bp · −
rpoC1 · NC_058605.1 · 20,876–23,728 bp · −
rpoB · NC_058605.1 · 23,734–26,946 bp · −
psbM · NC_058605.1 · 29,841–29,945 bp · −
trnD-GUC · NC_058605.1 · 30,468–30,541 bp · −
trnY-GUA · NC_058605.1 · 30,657–30,740 bp · −
trnE-UUC · NC_058605.1 · 30,800–30,869 bp · −
trnE-UUC · NC_058605.1 · 30,800–30,872 bp · −
trnT-GGU · NC_058605.1 · 31,458–31,529 bp · −
trnS-UGA · NC_058605.1 · 35,440–35,532 bp · −
trnfM-CAU · NC_058605.1 · 36,496–36,569 bp · −
rps14 · NC_058605.1 · 36,719–37,021 bp · −
psaB · NC_058605.1 · 37,149–39,353 bp · −
psaA · NC_058605.1 · 39,379–41,631 bp · −
ycf3 · NC_058605.1 · 42,354–44,312 bp · −
rps4 · NC_058605.1 · 45,026–45,631 bp · −
trnT-UGU · NC_058605.1 · 46,024–46,096 bp · −
ndhJ · NC_058605.1 · 48,370–48,846 bp · −
ndhK · NC_058605.1 · 48,947–49,624 bp · −
ndhC · NC_058605.1 · 49,678–50,040 bp · −
trnV-UAC · NC_058605.1 · 51,001–51,648 bp · −
atpE · NC_058605.1 · 52,127–52,528 bp · −
atpB · NC_058605.1 · 52,525–54,021 bp · −
psbJ · NC_058605.1 · 63,681–63,803 bp · −
psbL · NC_058605.1 · 63,941–64,057 bp · −
psbF · NC_058605.1 · 64,081–64,200 bp · −
psbE · NC_058605.1 · 64,215–64,466 bp · −
trnW-CCA · NC_058605.1 · 65,905–65,978 bp · −
trnP-UGG · NC_058605.1 · 66,148–66,221 bp · −
rpl20 · NC_058605.1 · 67,973–68,359 bp · −
rps12 · NC_058605.1 · 69,127–69,240 bp · −
rps12 · NC_058605.1 · 96,492–97,285 bp · −
clpP · NC_058605.1 · 69,367–71,245 bp · −
psbN · NC_058605.1 · 73,563–73,694 bp · −
rpoA · NC_058605.1 · 77,126–78,139 bp · −
rps11 · NC_058605.1 · 78,211–78,627 bp · −
rpl36 · NC_058605.1 · 78,730–78,843 bp · −
infA · NC_058605.1 · 78,939–79,172 bp · −
rps8 · NC_058605.1 · 79,295–79,708 bp · −
rpl14 · NC_058605.1 · 79,900–80,268 bp · −
rpl16 · NC_058605.1 · 80,395–81,697 bp · −
rps3 · NC_058605.1 · 81,844–82,506 bp · −
rpl22 · NC_058605.1 · 82,491–82,955 bp · −
rps19 · NC_058605.1 · 83,015–83,293 bp · −
rpl2 · NC_058605.1 · 83,346–84,837 bp · −
rpl23 · NC_058605.1 · 84,856–85,137 bp · −
trnI-CAU · NC_058605.1 · 85,303–85,376 bp · −
trnL-CAA · NC_058605.1 · 92,865–92,945 bp · −
ndhB · NC_058605.1 · 93,485–95,696 bp · −
rps7 · NC_058605.1 · 95,971–96,438 bp · −
trnN-GUU · NC_058605.1 · 107,386–107,457 bp · −
ndhF · NC_058605.1 · 108,847–111,069 bp · −
ndhD · NC_058605.1 · 113,791–115,311 bp · −
psaC · NC_058605.1 · 115,410–115,655 bp · −
ndhE · NC_058605.1 · 115,918–116,223 bp · −
ndhG · NC_058605.1 · 116,445–116,975 bp · −
ndhI · NC_058605.1 · 117,349–117,855 bp · −
ndhA · NC_058605.1 · 117,942–120,114 bp · −
ndhH · NC_058605.1 · 120,116–121,297 bp · −
rps15 · NC_058605.1 · 121,398–121,670 bp · −
ycf1 · NC_058605.1 · 122,051–127,597 bp · −
trnR-ACG · NC_058605.1 · 128,561–128,634 bp · −
trnR-ACG · NC_058605.1 · 128,562–128,634 bp · −
rrn5 · NC_058605.1 · 128,869–128,989 bp · −
rrn4.5 · NC_058605.1 · 129,245–129,347 bp · −
rrn23 · NC_058605.1 · 129,446–132,256 bp · −
trnA-UGC · NC_058605.1 · 132,448–133,326 bp · −
trnI-GAU · NC_058605.1 · 133,391–134,399 bp · −
rrn16 · NC_058605.1 · 134,689–136,179 bp · −
trnV-GAC · NC_058605.1 · 136,407–136,478 bp · −
ycf15 · NC_058605.1 · 142,776–143,024 bp · −
ycf2 · NC_058605.1 · 143,067–149,915 bp · −
psbK · NC_058605.1 · 7,514–7,699 bp · +
psbI · NC_058605.1 · 8,075–8,185 bp · +
trnG-UCC · NC_058605.1 · 9,083–9,841 bp · +
trnR-UCU · NC_058605.1 · 10,015–10,089 bp · +
trnC-GCA · NC_058605.1 · 28,054–28,129 bp · +
petN · NC_058605.1 · 28,966–29,055 bp · +
psbD · NC_058605.1 · 32,779–33,840 bp · +
psbC · NC_058605.1 · 33,788–35,209 bp · +
psbZ · NC_058605.1 · 35,858–36,046 bp · +
trnG-GCC · NC_058605.1 · 36,276–36,346 bp · +
trnS-GGA · NC_058605.1 · 44,642–44,728 bp · +
trnL-UAA · NC_058605.1 · 46,769–47,342 bp · +
trnF-GAA · NC_058605.1 · 47,634–47,706 bp · +
trnM-CAU · NC_058605.1 · 51,837–51,909 bp · +
rbcL · NC_058605.1 · 54,824–56,269 bp · +
accD · NC_058605.1 · 56,959–58,419 bp · +
psaI · NC_058605.1 · 59,106–59,216 bp · +
ycf4 · NC_058605.1 · 59,652–60,206 bp · +
cemA · NC_058605.1 · 60,767–61,456 bp · +
petA · NC_058605.1 · 61,673–62,635 bp · +
petL · NC_058605.1 · 65,397–65,492 bp · +
petG · NC_058605.1 · 65,666–65,779 bp · +
psaJ · NC_058605.1 · 66,497–66,631 bp · +
rpl33 · NC_058605.1 · 67,103–67,303 bp · +
rps18 · NC_058605.1 · 67,451–67,756 bp · +
rps12 · NC_058605.1 · 138,095–138,888 bp · +
psbB · NC_058605.1 · 71,683–73,209 bp · +
psbT · NC_058605.1 · 73,395–73,502 bp · +
psbH · NC_058605.1 · 73,798–74,019 bp · +
petB · NC_058605.1 · 74,144–75,524 bp · +
petD · NC_058605.1 · 75,727–76,948 bp · +
ycf2 · NC_058605.1 · 85,465–92,313 bp · +
ycf15 · NC_058605.1 · 92,356–92,604 bp · +
trnV-GAC · NC_058605.1 · 98,902–98,973 bp · +
rrn16S · NC_058605.1 · 99,201–100,691 bp · +
trnI-GAU · NC_058605.1 · 100,981–101,989 bp · +
trnA-UGC · NC_058605.1 · 102,054–102,932 bp · +
rrn23 · NC_058605.1 · 103,124–105,934 bp · +
rrn4.5 · NC_058605.1 · 106,033–106,135 bp · +
rrn5 · NC_058605.1 · 106,391–106,511 bp · +
trnR-ACG · NC_058605.1 · 106,746–106,818 bp · +
trnR-ACG · NC_058605.1 · 106,746–106,819 bp · +
ycf1 · NC_058605.1 · 107,783–108,901 bp · +
rpl32 · NC_058605.1 · 111,575–111,751 bp · +
trnL-UAG · NC_058605.1 · 112,476–112,555 bp · +
ccsA · NC_058605.1 · 112,640–113,611 bp · +
trnN-GUU · NC_058605.1 · 127,923–127,994 bp · +
rps7 · NC_058605.1 · 138,942–139,409 bp · +
ndhB · NC_058605.1 · 139,684–141,895 bp · +
trnL-CAA · NC_058605.1 · 142,435–142,515 bp · +
trnI-CAU · NC_058605.1 · 150,004–150,077 bp · +
rpl23 · NC_058605.1 · 150,243–150,524 bp · +
rpl2 · NC_058605.1 · 150,543–152,034 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Paraphlomis koreana
ANNOTATED PLASTOME
NC_058605.1
152,128 bp · 136 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 38032 76064 114096 152128 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16S trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG trnR-ACG ycf1 rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnE-UUC trnT-GGU trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
137 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 2 76 75 Locate
psbA gene − 316 1374 1059 Locate
trnK-UUU gene − 1607 4195 2589 Locate
matK gene − 1912 3447 1536 Locate
rps16 gene − 5017 6158 1142 Locate
trnQ-UUG gene − 7106 7177 72 Locate
psbK gene + 7514 7699 186 Locate
psbI gene + 8075 8185 111 Locate
trnS-GCU gene − 8310 8397 88 Locate
trnG-UCC gene + 9083 9841 759 Locate
trnR-UCU gene + 10015 10089 75 Locate
atpA gene − 10186 11709 1524 Locate
atpF gene − 11797 13015 1219 Locate
atpH gene − 13383 13628 246 Locate
atpI gene − 14628 15371 744 Locate
rps2 gene − 15602 16312 711 Locate
rpoC2 gene − 16612 20721 4110 Locate
rpoC1 gene − 20876 23728 2853 Locate
rpoB gene − 23734 26946 3213 Locate
trnC-GCA gene + 28054 28129 76 Locate
petN gene + 28966 29055 90 Locate
psbM gene − 29841 29945 105 Locate
trnD-GUC gene − 30468 30541 74 Locate
trnY-GUA gene − 30657 30740 84 Locate
trnE-UUC tRNA − 30800 30869 70 Locate
trnE-UUC gene − 30800 30872 73 Locate
trnT-GGU gene − 31458 31529 72 Locate
psbD gene + 32779 33840 1062 Locate
psbC gene + 33788 35209 1422 Locate
trnS-UGA gene − 35440 35532 93 Locate
psbZ gene + 35858 36046 189 Locate
trnG-GCC gene + 36276 36346 71 Locate
trnfM-CAU gene − 36496 36569 74 Locate
rps14 gene − 36719 37021 303 Locate
psaB gene − 37149 39353 2205 Locate
psaA gene − 39379 41631 2253 Locate
ycf3 gene − 42354 44312 1959 Locate
trnS-GGA gene + 44642 44728 87 Locate
rps4 gene − 45026 45631 606 Locate
trnT-UGU gene − 46024 46096 73 Locate
trnL-UAA gene + 46769 47342 574 Locate
trnF-GAA gene + 47634 47706 73 Locate
ndhJ gene − 48370 48846 477 Locate
ndhK gene − 48947 49624 678 Locate
ndhC gene − 49678 50040 363 Locate
trnV-UAC gene − 51001 51648 648 Locate
trnM-CAU gene + 51837 51909 73 Locate
atpE gene − 52127 52528 402 Locate
atpB gene − 52525 54021 1497 Locate
rbcL gene + 54824 56269 1446 Locate
accD gene + 56959 58419 1461 Locate
psaI gene + 59106 59216 111 Locate
ycf4 gene + 59652 60206 555 Locate
cemA gene + 60767 61456 690 Locate
petA gene + 61673 62635 963 Locate
psbJ gene − 63681 63803 123 Locate
psbL gene − 63941 64057 117 Locate
psbF gene − 64081 64200 120 Locate
psbE gene − 64215 64466 252 Locate
petL gene + 65397 65492 96 Locate
petG gene + 65666 65779 114 Locate
trnW-CCA gene − 65905 65978 74 Locate
trnP-UGG gene − 66148 66221 74 Locate
psaJ gene + 66497 66631 135 Locate
rpl33 gene + 67103 67303 201 Locate
rps18 gene + 67451 67756 306 Locate
rpl20 gene − 67973 68359 387 Locate
rps12 gene − 69127 69240 114 Locate
clpP gene − 69367 71245 1879 Locate
psbB gene + 71683 73209 1527 Locate
psbT gene + 73395 73502 108 Locate
psbN gene − 73563 73694 132 Locate
psbH gene + 73798 74019 222 Locate
petB gene + 74144 75524 1381 Locate
petD gene + 75727 76948 1222 Locate
rpoA gene − 77126 78139 1014 Locate
rps11 gene − 78211 78627 417 Locate
rpl36 gene − 78730 78843 114 Locate
infA gene − 78939 79172 234 Locate
rps8 gene − 79295 79708 414 Locate
rpl14 gene − 79900 80268 369 Locate
rpl16 gene − 80395 81697 1303 Locate
rps3 gene − 81844 82506 663 Locate
rpl22 gene − 82491 82955 465 Locate
rps19 gene − 83015 83293 279 Locate
rpl2 gene − 83346 84837 1492 Locate
rpl23 gene − 84856 85137 282 Locate
trnI-CAU gene − 85303 85376 74 Locate
ycf2 gene + 85465 92313 6849 Locate
ycf15 gene + 92356 92604 249 Locate
trnL-CAA gene − 92865 92945 81 Locate
ndhB gene − 93485 95696 2212 Locate
rps7 gene − 95971 96438 468 Locate
rps12 gene − 96492 97285 794 Locate
trnV-GAC gene + 98902 98973 72 Locate
rrn16S gene + 99201 100691 1491 Locate
trnI-GAU gene + 100981 101989 1009 Locate
trnA-UGC gene + 102054 102932 879 Locate
rrn23 gene + 103124 105934 2811 Locate
rrn4.5 gene + 106033 106135 103 Locate
rrn5 gene + 106391 106511 121 Locate
trnR-ACG tRNA + 106746 106818 73 Locate
trnR-ACG gene + 106746 106819 74 Locate
trnN-GUU gene − 107386 107457 72 Locate
ycf1 gene + 107783 108901 1119 Locate
ndhF gene − 108847 111069 2223 Locate
rpl32 gene + 111575 111751 177 Locate
trnL-UAG gene + 112476 112555 80 Locate
ccsA gene + 112640 113611 972 Locate
ndhD gene − 113791 115311 1521 Locate
psaC gene − 115410 115655 246 Locate
ndhE gene − 115918 116223 306 Locate
ndhG gene − 116445 116975 531 Locate
ndhI gene − 117349 117855 507 Locate
ndhA gene − 117942 120114 2173 Locate
ndhH gene − 120116 121297 1182 Locate
rps15 gene − 121398 121670 273 Locate
ycf1 gene − 122051 127597 5547 Locate
trnN-GUU gene + 127923 127994 72 Locate
trnR-ACG gene − 128561 128634 74 Locate
trnR-ACG tRNA − 128562 128634 73 Locate
rrn5 gene − 128869 128989 121 Locate
rrn4.5 gene − 129245 129347 103 Locate
rrn23 gene − 129446 132256 2811 Locate
trnA-UGC gene − 132448 133326 879 Locate
trnI-GAU gene − 133391 134399 1009 Locate
rrn16 gene − 134689 136179 1491 Locate
trnV-GAC gene − 136407 136478 72 Locate
rps12 gene + 138095 138888 794 Locate
rps7 gene + 138942 139409 468 Locate
ndhB gene + 139684 141895 2212 Locate
trnL-CAA gene + 142435 142515 81 Locate
ycf15 gene − 142776 143024 249 Locate
ycf2 gene − 143067 149915 6849 Locate
trnI-CAU gene + 150004 150077 74 Locate
rpl23 gene + 150243 150524 282 Locate
rpl2 gene + 150543 152034 1492 Locate
Status Available
Accession NC_058605.1
Length 152,128 bp
GC content 38.4%
Annotated genes 136
Gene sequence records 8
Translation Rna 40 Photosystem Ii 15 Other 15 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources