Paraphlomis kwangtungensis chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · OR565963.1 · 2–76 bp · −
psbA · OR565963.1 · 308–1,366 bp · −
trnK-UUU · OR565963.1 · 1,599–4,187 bp · −
matK · OR565963.1 · 1,903–3,438 bp · −
rps16 · OR565963.1 · 5,116–6,256 bp · −
trnQ-UUG · OR565963.1 · 7,204–7,276 bp · −
trnS-GCU · OR565963.1 · 8,408–8,495 bp · −
atpA · OR565963.1 · 10,292–11,815 bp · −
atpF · OR565963.1 · 11,903–13,123 bp · −
atpH · OR565963.1 · 13,487–13,732 bp · −
atpI · OR565963.1 · 14,732–15,475 bp · −
rps2 · OR565963.1 · 15,706–16,416 bp · −
rpoC2 · OR565963.1 · 16,558–20,661 bp · −
rpoC1 · OR565963.1 · 20,816–23,647 bp · −
rpoB · OR565963.1 · 23,674–26,886 bp · −
psbM · OR565963.1 · 29,792–29,896 bp · −
trnD-GUC · OR565963.1 · 30,420–30,493 bp · −
trnY-GUA · OR565963.1 · 30,608–30,691 bp · −
trnE-UUC · OR565963.1 · 30,751–30,823 bp · −
trnS-UGA · OR565963.1 · 35,375–35,467 bp · −
trnfM-CAU · OR565963.1 · 36,431–36,504 bp · −
rps14 · OR565963.1 · 36,654–36,956 bp · −
psaB · OR565963.1 · 37,084–39,288 bp · −
psaA · OR565963.1 · 39,314–41,566 bp · −
ycf3 · OR565963.1 · 42,294–44,249 bp · −
rps4 · OR565963.1 · 44,965–45,570 bp · −
trnT-UGU · OR565963.1 · 45,961–46,033 bp · −
ndhJ · OR565963.1 · 48,311–48,787 bp · −
ndhK · OR565963.1 · 48,888–49,565 bp · −
ndhC · OR565963.1 · 49,619–49,981 bp · −
trnV-UAC · OR565963.1 · 50,947–51,593 bp · −
atpE · OR565963.1 · 52,072–52,473 bp · −
atpB · OR565963.1 · 52,470–53,966 bp · −
psbJ · OR565963.1 · 63,633–63,755 bp · −
psbL · OR565963.1 · 63,893–64,009 bp · −
psbF · OR565963.1 · 64,033–64,152 bp · −
psbE · OR565963.1 · 64,167–64,418 bp · −
trnW-CCA · OR565963.1 · 65,856–65,929 bp · −
trnP-UGG · OR565963.1 · 66,099–66,172 bp · −
rpl20 · OR565963.1 · 67,879–68,265 bp · −
rps12 · OR565963.1 · 69,031–69,144 bp · −
rps12 · OR565963.1 · 96,395–97,188 bp · −
clpP · OR565963.1 · 69,271–71,136 bp · −
psbN · OR565963.1 · 73,463–73,594 bp · −
rpoA · OR565963.1 · 77,001–78,014 bp · −
rps11 · OR565963.1 · 78,086–78,517 bp · −
rpl36 · OR565963.1 · 78,605–78,718 bp · −
infA · OR565963.1 · 78,814–79,047 bp · −
rps8 · OR565963.1 · 79,172–79,585 bp · −
rpl14 · OR565963.1 · 79,781–80,149 bp · −
rpl16 · OR565963.1 · 80,276–81,582 bp · −
rps3 · OR565963.1 · 81,729–82,391 bp · −
rpl22 · OR565963.1 · 82,376–82,840 bp · −
rps19 · OR565963.1 · 82,900–83,178 bp · −
rpl2 · OR565963.1 · 83,231–84,722 bp · −
rpl23 · OR565963.1 · 84,741–85,022 bp · −
trnI-CAU · OR565963.1 · 85,188–85,261 bp · −
trnL-CAA · OR565963.1 · 92,768–92,848 bp · −
ndhB · OR565963.1 · 93,388–95,599 bp · −
rps7 · OR565963.1 · 95,874–96,341 bp · −
trnN-GUU · OR565963.1 · 107,289–107,360 bp · −
ndhF · OR565963.1 · 108,750–110,972 bp · −
ndhD · OR565963.1 · 113,715–115,235 bp · −
psaC · OR565963.1 · 115,335–115,580 bp · −
ndhE · OR565963.1 · 115,843–116,148 bp · −
ndhG · OR565963.1 · 116,370–116,900 bp · −
ndhI · OR565963.1 · 117,279–117,776 bp · −
ndhA · OR565963.1 · 117,863–120,022 bp · −
ndhH · OR565963.1 · 120,024–121,205 bp · −
rps15 · OR565963.1 · 121,306–121,578 bp · −
ycf1 · OR565963.1 · 121,959–127,517 bp · −
trnR-ACG · OR565963.1 · 128,482–128,554 bp · −
rrn5 · OR565963.1 · 128,789–128,909 bp · −
rrn4.5 · OR565963.1 · 129,165–129,267 bp · −
rrn23 · OR565963.1 · 129,366–132,175 bp · −
trnA-UGC · OR565963.1 · 132,368–133,246 bp · −
trnI-GAU · OR565963.1 · 133,311–134,319 bp · −
rrn16 · OR565963.1 · 134,609–136,099 bp · −
trnV-GAC · OR565963.1 · 136,327–136,398 bp · −
ycf15 · OR565963.1 · 142,696–142,944 bp · −
ycf2 · OR565963.1 · 142,987–149,853 bp · −
psbK · OR565963.1 · 7,613–7,798 bp · +
psbI · OR565963.1 · 8,173–8,283 bp · +
trnG-UCC · OR565963.1 · 9,188–9,947 bp · +
trnR-UCU · OR565963.1 · 10,121–10,195 bp · +
trnC-GCA · OR565963.1 · 27,989–28,069 bp · +
petN · OR565963.1 · 28,901–28,990 bp · +
trnT-GGU · OR565963.1 · 31,391–31,461 bp · +
psbD · OR565963.1 · 32,714–33,775 bp · +
psbC · OR565963.1 · 33,723–35,144 bp · +
psbZ · OR565963.1 · 35,793–35,981 bp · +
trnS-GGA · OR565963.1 · 44,579–44,665 bp · +
trnL-UAA · OR565963.1 · 46,711–47,284 bp · +
trnF-GAA · OR565963.1 · 47,576–47,648 bp · +
trnM-CAU · OR565963.1 · 51,782–51,854 bp · +
rbcL · OR565963.1 · 54,764–56,209 bp · +
accD · OR565963.1 · 56,899–58,365 bp · +
psaI · OR565963.1 · 59,052–59,162 bp · +
ycf4 · OR565963.1 · 59,598–60,152 bp · +
cemA · OR565963.1 · 60,720–61,409 bp · +
petA · OR565963.1 · 61,626–62,588 bp · +
petL · OR565963.1 · 65,347–65,442 bp · +
petG · OR565963.1 · 65,617–65,730 bp · +
psaJ · OR565963.1 · 66,447–66,581 bp · +
rpl33 · OR565963.1 · 67,048–67,248 bp · +
rps18 · OR565963.1 · 67,394–67,699 bp · +
rps12 · OR565963.1 · 138,015–138,808 bp · +
psbB · OR565963.1 · 71,574–73,100 bp · +
psbT · OR565963.1 · 73,295–73,402 bp · +
psbH · OR565963.1 · 73,698–73,919 bp · +
petB · OR565963.1 · 74,044–75,422 bp · +
petD · OR565963.1 · 75,617–76,838 bp · +
ycf2 · OR565963.1 · 85,350–92,216 bp · +
ycf15 · OR565963.1 · 92,259–92,507 bp · +
trnV-GAC · OR565963.1 · 98,805–98,876 bp · +
rrn16 · OR565963.1 · 99,104–100,594 bp · +
trnI-GAU · OR565963.1 · 100,884–101,892 bp · +
trnA-UGC · OR565963.1 · 101,957–102,835 bp · +
rrn23 · OR565963.1 · 103,028–105,837 bp · +
rrn4.5 · OR565963.1 · 105,936–106,038 bp · +
rrn5 · OR565963.1 · 106,294–106,414 bp · +
trnR-ACG · OR565963.1 · 106,649–106,721 bp · +
rpl32 · OR565963.1 · 111,478–111,654 bp · +
trnL-UAG · OR565963.1 · 112,384–112,463 bp · +
ccsA · OR565963.1 · 112,560–113,531 bp · +
trnN-GUU · OR565963.1 · 127,843–127,914 bp · +
rps7 · OR565963.1 · 138,862–139,329 bp · +
ndhB · OR565963.1 · 139,604–141,815 bp · +
trnL-CAA · OR565963.1 · 142,355–142,435 bp · +
trnI-CAU · OR565963.1 · 149,942–150,015 bp · +
rpl23 · OR565963.1 · 150,181–150,462 bp · +
rpl2 · OR565963.1 · 150,481–151,972 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Paraphlomis kwangtungensis
ANNOTATED PLASTOME
OR565963.1
152,066 bp · 131 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 38016 76033 114050 152066 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
132 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 2 76 75 Locate
psbA gene − 308 1366 1059 Locate
trnK-UUU gene − 1599 4187 2589 Locate
matK gene − 1903 3438 1536 Locate
rps16 gene − 5116 6256 1141 Locate
trnQ-UUG gene − 7204 7276 73 Locate
psbK gene + 7613 7798 186 Locate
psbI gene + 8173 8283 111 Locate
trnS-GCU gene − 8408 8495 88 Locate
trnG-UCC gene + 9188 9947 760 Locate
trnR-UCU gene + 10121 10195 75 Locate
atpA gene − 10292 11815 1524 Locate
atpF gene − 11903 13123 1221 Locate
atpH gene − 13487 13732 246 Locate
atpI gene − 14732 15475 744 Locate
rps2 gene − 15706 16416 711 Locate
rpoC2 gene − 16558 20661 4104 Locate
rpoC1 gene − 20816 23647 2832 Locate
rpoB gene − 23674 26886 3213 Locate
trnC-GCA gene + 27989 28069 81 Locate
petN gene + 28901 28990 90 Locate
psbM gene − 29792 29896 105 Locate
trnD-GUC gene − 30420 30493 74 Locate
trnY-GUA gene − 30608 30691 84 Locate
trnE-UUC gene − 30751 30823 73 Locate
trnT-GGU gene + 31391 31461 71 Locate
psbD gene + 32714 33775 1062 Locate
psbC gene + 33723 35144 1422 Locate
trnS-UGA gene − 35375 35467 93 Locate
psbZ gene + 35793 35981 189 Locate
trnfM-CAU gene − 36431 36504 74 Locate
rps14 gene − 36654 36956 303 Locate
psaB gene − 37084 39288 2205 Locate
psaA gene − 39314 41566 2253 Locate
ycf3 gene − 42294 44249 1956 Locate
trnS-GGA gene + 44579 44665 87 Locate
rps4 gene − 44965 45570 606 Locate
trnT-UGU gene − 45961 46033 73 Locate
trnL-UAA gene + 46711 47284 574 Locate
trnF-GAA gene + 47576 47648 73 Locate
ndhJ gene − 48311 48787 477 Locate
ndhK gene − 48888 49565 678 Locate
ndhC gene − 49619 49981 363 Locate
trnV-UAC gene − 50947 51593 647 Locate
trnM-CAU gene + 51782 51854 73 Locate
atpE gene − 52072 52473 402 Locate
atpB gene − 52470 53966 1497 Locate
rbcL gene + 54764 56209 1446 Locate
accD gene + 56899 58365 1467 Locate
psaI gene + 59052 59162 111 Locate
ycf4 gene + 59598 60152 555 Locate
cemA gene + 60720 61409 690 Locate
petA gene + 61626 62588 963 Locate
psbJ gene − 63633 63755 123 Locate
psbL gene − 63893 64009 117 Locate
psbF gene − 64033 64152 120 Locate
psbE gene − 64167 64418 252 Locate
petL gene + 65347 65442 96 Locate
petG gene + 65617 65730 114 Locate
trnW-CCA gene − 65856 65929 74 Locate
trnP-UGG gene − 66099 66172 74 Locate
psaJ gene + 66447 66581 135 Locate
rpl33 gene + 67048 67248 201 Locate
rps18 gene + 67394 67699 306 Locate
rpl20 gene − 67879 68265 387 Locate
rps12 gene − 69031 69144 114 Locate
clpP gene − 69271 71136 1866 Locate
psbB gene + 71574 73100 1527 Locate
psbT gene + 73295 73402 108 Locate
psbN gene − 73463 73594 132 Locate
psbH gene + 73698 73919 222 Locate
petB gene + 74044 75422 1379 Locate
petD gene + 75617 76838 1222 Locate
rpoA gene − 77001 78014 1014 Locate
rps11 gene − 78086 78517 432 Locate
rpl36 gene − 78605 78718 114 Locate
infA gene − 78814 79047 234 Locate
rps8 gene − 79172 79585 414 Locate
rpl14 gene − 79781 80149 369 Locate
rpl16 gene − 80276 81582 1307 Locate
rps3 gene − 81729 82391 663 Locate
rpl22 gene − 82376 82840 465 Locate
rps19 gene − 82900 83178 279 Locate
rpl2 gene − 83231 84722 1492 Locate
rpl23 gene − 84741 85022 282 Locate
trnI-CAU gene − 85188 85261 74 Locate
ycf2 gene + 85350 92216 6867 Locate
ycf15 gene + 92259 92507 249 Locate
trnL-CAA gene − 92768 92848 81 Locate
ndhB gene − 93388 95599 2212 Locate
rps7 gene − 95874 96341 468 Locate
rps12 gene − 96395 97188 794 Locate
trnV-GAC gene + 98805 98876 72 Locate
rrn16 gene + 99104 100594 1491 Locate
trnI-GAU gene + 100884 101892 1009 Locate
trnA-UGC gene + 101957 102835 879 Locate
rrn23 gene + 103028 105837 2810 Locate
rrn4.5 gene + 105936 106038 103 Locate
rrn5 gene + 106294 106414 121 Locate
trnR-ACG gene + 106649 106721 73 Locate
trnN-GUU gene − 107289 107360 72 Locate
ndhF gene − 108750 110972 2223 Locate
rpl32 gene + 111478 111654 177 Locate
trnL-UAG gene + 112384 112463 80 Locate
ccsA gene + 112560 113531 972 Locate
ndhD gene − 113715 115235 1521 Locate
psaC gene − 115335 115580 246 Locate
ndhE gene − 115843 116148 306 Locate
ndhG gene − 116370 116900 531 Locate
ndhI gene − 117279 117776 498 Locate
ndhA gene − 117863 120022 2160 Locate
ndhH gene − 120024 121205 1182 Locate
rps15 gene − 121306 121578 273 Locate
ycf1 gene − 121959 127517 5559 Locate
trnN-GUU gene + 127843 127914 72 Locate
trnR-ACG gene − 128482 128554 73 Locate
rrn5 gene − 128789 128909 121 Locate
rrn4.5 gene − 129165 129267 103 Locate
rrn23 gene − 129366 132175 2810 Locate
trnA-UGC gene − 132368 133246 879 Locate
trnI-GAU gene − 133311 134319 1009 Locate
rrn16 gene − 134609 136099 1491 Locate
trnV-GAC gene − 136327 136398 72 Locate
rps12 gene + 138015 138808 794 Locate
rps7 gene + 138862 139329 468 Locate
ndhB gene + 139604 141815 2212 Locate
trnL-CAA gene + 142355 142435 81 Locate
ycf15 gene − 142696 142944 249 Locate
ycf2 gene − 142987 149853 6867 Locate
trnI-CAU gene + 149942 150015 74 Locate
rpl23 gene + 150181 150462 282 Locate
rpl2 gene + 150481 151972 1492 Locate
Status Available
Accession OR565963.1
Length 152,066 bp
GC content 38.4%
Annotated genes 131
Gene sequence records 8
Translation Rna 36 Photosystem Ii 15 Other 14 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources