Paraphlomis lanceolata chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · OR565955.1 · 2–76 bp · −
psbA · OR565955.1 · 307–1,365 bp · −
trnK-UUU · OR565955.1 · 1,598–4,181 bp · −
matK · OR565955.1 · 1,897–3,432 bp · −
rps16 · OR565955.1 · 5,109–6,254 bp · −
trnQ-UUG · OR565955.1 · 7,202–7,274 bp · −
trnS-GCU · OR565955.1 · 8,408–8,495 bp · −
atpA · OR565955.1 · 10,281–11,804 bp · −
atpF · OR565955.1 · 11,892–13,113 bp · −
atpH · OR565955.1 · 13,479–13,724 bp · −
atpI · OR565955.1 · 14,775–15,518 bp · −
rps2 · OR565955.1 · 15,749–16,459 bp · −
rpoC2 · OR565955.1 · 16,680–20,867 bp · −
rpoC1 · OR565955.1 · 21,022–23,852 bp · −
rpoB · OR565955.1 · 23,879–27,091 bp · −
psbM · OR565955.1 · 29,982–30,086 bp · −
trnD-GUC · OR565955.1 · 30,610–30,683 bp · −
trnY-GUA · OR565955.1 · 30,798–30,881 bp · −
trnE-UUC · OR565955.1 · 30,941–31,010 bp · −
trnS-UGA · OR565955.1 · 35,557–35,649 bp · −
trnfM-CAU · OR565955.1 · 36,599–36,672 bp · −
rps14 · OR565955.1 · 36,822–37,124 bp · −
psaB · OR565955.1 · 37,252–39,456 bp · −
psaA · OR565955.1 · 39,482–41,734 bp · −
ycf3 · OR565955.1 · 42,462–44,415 bp · −
rps4 · OR565955.1 · 45,116–45,721 bp · −
trnT-UGU · OR565955.1 · 46,112–46,184 bp · −
ndhJ · OR565955.1 · 48,464–48,940 bp · −
ndhK · OR565955.1 · 49,041–49,718 bp · −
ndhC · OR565955.1 · 49,772–50,134 bp · −
trnV-UAC · OR565955.1 · 51,100–51,752 bp · −
atpE · OR565955.1 · 52,231–52,632 bp · −
atpB · OR565955.1 · 52,629–54,125 bp · −
psbJ · OR565955.1 · 63,773–63,895 bp · −
psbL · OR565955.1 · 64,033–64,149 bp · −
psbF · OR565955.1 · 64,173–64,292 bp · −
psbE · OR565955.1 · 64,307–64,558 bp · −
trnW-CCA · OR565955.1 · 66,000–66,073 bp · −
trnP-UGG · OR565955.1 · 66,243–66,316 bp · −
rpl20 · OR565955.1 · 68,029–68,415 bp · −
rps12 · OR565955.1 · 69,182–69,295 bp · −
rps12 · OR565955.1 · 96,549–97,342 bp · −
clpP · OR565955.1 · 69,422–71,287 bp · −
psbN · OR565955.1 · 73,613–73,744 bp · −
rpoA · OR565955.1 · 77,143–78,156 bp · −
rps11 · OR565955.1 · 78,228–78,659 bp · −
rpl36 · OR565955.1 · 78,747–78,860 bp · −
infA · OR565955.1 · 78,956–79,189 bp · −
rps8 · OR565955.1 · 79,318–79,731 bp · −
rpl14 · OR565955.1 · 79,922–80,290 bp · −
rpl16 · OR565955.1 · 80,417–81,723 bp · −
rps3 · OR565955.1 · 81,870–82,532 bp · −
rpl22 · OR565955.1 · 82,517–82,981 bp · −
rps19 · OR565955.1 · 83,041–83,319 bp · −
rpl2 · OR565955.1 · 83,371–84,862 bp · −
rpl23 · OR565955.1 · 84,881–85,162 bp · −
trnI-CAU · OR565955.1 · 85,328–85,401 bp · −
trnL-CAA · OR565955.1 · 92,926–93,006 bp · −
ndhB · OR565955.1 · 93,542–95,753 bp · −
rps7 · OR565955.1 · 96,028–96,495 bp · −
trnN-GUU · OR565955.1 · 107,443–107,514 bp · −
ndhF · OR565955.1 · 108,904–111,120 bp · −
ndhD · OR565955.1 · 113,849–115,369 bp · −
psaC · OR565955.1 · 115,468–115,713 bp · −
ndhE · OR565955.1 · 115,976–116,281 bp · −
ndhG · OR565955.1 · 116,503–117,033 bp · −
ndhI · OR565955.1 · 117,412–117,918 bp · −
ndhA · OR565955.1 · 118,005–120,163 bp · −
ndhH · OR565955.1 · 120,165–121,346 bp · −
rps15 · OR565955.1 · 121,447–121,782 bp · −
ycf1 · OR565955.1 · 122,100–127,652 bp · −
trnR-ACG · OR565955.1 · 128,616–128,689 bp · −
rrn5 · OR565955.1 · 128,924–129,044 bp · −
rrn4.5 · OR565955.1 · 129,300–129,402 bp · −
rrn23 · OR565955.1 · 129,501–132,310 bp · −
trnA-UGC · OR565955.1 · 132,503–133,381 bp · −
trnI-GAU · OR565955.1 · 133,446–134,454 bp · −
rrn16 · OR565955.1 · 134,744–136,234 bp · −
trnV-GAC · OR565955.1 · 136,462–136,533 bp · −
ycf15 · OR565955.1 · 142,827–143,090 bp · −
ycf2 · OR565955.1 · 143,118–150,002 bp · −
psbK · OR565955.1 · 7,611–7,796 bp · +
psbI · OR565955.1 · 8,175–8,285 bp · +
trnG-UCC · OR565955.1 · 9,186–9,936 bp · +
trnR-UCU · OR565955.1 · 10,110–10,184 bp · +
trnC-GCA · OR565955.1 · 28,193–28,268 bp · +
petN · OR565955.1 · 29,099–29,194 bp · +
trnT-GGU · OR565955.1 · 31,573–31,643 bp · +
psbD · OR565955.1 · 32,894–33,955 bp · +
psbC · OR565955.1 · 33,903–35,324 bp · +
psbZ · OR565955.1 · 35,966–36,154 bp · +
trnG-GCC · OR565955.1 · 36,379–36,449 bp · +
trnS-GGA · OR565955.1 · 44,732–44,818 bp · +
trnL-UAA · OR565955.1 · 46,858–47,431 bp · +
trnF-GAA · OR565955.1 · 47,723–47,795 bp · +
trnM-CAU · OR565955.1 · 51,941–52,013 bp · +
rbcL · OR565955.1 · 54,907–56,361 bp · +
accD · OR565955.1 · 57,047–58,513 bp · +
psaI · OR565955.1 · 59,202–59,312 bp · +
ycf4 · OR565955.1 · 59,743–60,297 bp · +
cemA · OR565955.1 · 60,858–61,547 bp · +
petA · OR565955.1 · 61,764–62,726 bp · +
petL · OR565955.1 · 65,491–65,586 bp · +
petG · OR565955.1 · 65,761–65,874 bp · +
psaJ · OR565955.1 · 66,591–66,725 bp · +
rpl33 · OR565955.1 · 67,197–67,397 bp · +
rps18 · OR565955.1 · 67,544–67,849 bp · +
rps12 · OR565955.1 · 138,150–138,943 bp · +
psbB · OR565955.1 · 71,725–73,251 bp · +
psbT · OR565955.1 · 73,445–73,552 bp · +
psbH · OR565955.1 · 73,848–74,069 bp · +
petB · OR565955.1 · 74,184–75,564 bp · +
petD · OR565955.1 · 75,759–76,980 bp · +
ycf2 · OR565955.1 · 85,490–92,374 bp · +
ycf15 · OR565955.1 · 92,417–92,665 bp · +
trnV-GAC · OR565955.1 · 98,959–99,030 bp · +
rrn16 · OR565955.1 · 99,258–100,748 bp · +
trnI-GAU · OR565955.1 · 101,038–102,046 bp · +
trnA-UGC · OR565955.1 · 102,111–102,989 bp · +
rrn23 · OR565955.1 · 103,182–105,991 bp · +
rrn4.5 · OR565955.1 · 106,090–106,192 bp · +
rrn5 · OR565955.1 · 106,448–106,568 bp · +
trnR-ACG · OR565955.1 · 106,803–106,876 bp · +
rpl32 · OR565955.1 · 111,631–111,807 bp · +
trnL-UAG · OR565955.1 · 112,531–112,610 bp · +
ccsA · OR565955.1 · 112,695–113,666 bp · +
trnN-GUU · OR565955.1 · 127,978–128,049 bp · +
rps7 · OR565955.1 · 138,997–139,464 bp · +
ndhB · OR565955.1 · 139,739–141,950 bp · +
trnL-CAA · OR565955.1 · 142,486–142,566 bp · +
trnI-CAU · OR565955.1 · 150,091–150,164 bp · +
rpl23 · OR565955.1 · 150,330–150,611 bp · +
rpl2 · OR565955.1 · 150,630–152,121 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Paraphlomis lanceolata
ANNOTATED PLASTOME
OR565955.1
152,214 bp · 132 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 38054 76107 114160 152214 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
133 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 2 76 75 Locate
psbA gene − 307 1365 1059 Locate
trnK-UUU gene − 1598 4181 2584 Locate
matK gene − 1897 3432 1536 Locate
rps16 gene − 5109 6254 1146 Locate
trnQ-UUG gene − 7202 7274 73 Locate
psbK gene + 7611 7796 186 Locate
psbI gene + 8175 8285 111 Locate
trnS-GCU gene − 8408 8495 88 Locate
trnG-UCC gene + 9186 9936 751 Locate
trnR-UCU gene + 10110 10184 75 Locate
atpA gene − 10281 11804 1524 Locate
atpF gene − 11892 13113 1222 Locate
atpH gene − 13479 13724 246 Locate
atpI gene − 14775 15518 744 Locate
rps2 gene − 15749 16459 711 Locate
rpoC2 gene − 16680 20867 4188 Locate
rpoC1 gene − 21022 23852 2831 Locate
rpoB gene − 23879 27091 3213 Locate
trnC-GCA gene + 28193 28268 76 Locate
petN gene + 29099 29194 96 Locate
psbM gene − 29982 30086 105 Locate
trnD-GUC gene − 30610 30683 74 Locate
trnY-GUA gene − 30798 30881 84 Locate
trnE-UUC gene − 30941 31010 70 Locate
trnT-GGU gene + 31573 31643 71 Locate
psbD gene + 32894 33955 1062 Locate
psbC gene + 33903 35324 1422 Locate
trnS-UGA gene − 35557 35649 93 Locate
psbZ gene + 35966 36154 189 Locate
trnG-GCC gene + 36379 36449 71 Locate
trnfM-CAU gene − 36599 36672 74 Locate
rps14 gene − 36822 37124 303 Locate
psaB gene − 37252 39456 2205 Locate
psaA gene − 39482 41734 2253 Locate
ycf3 gene − 42462 44415 1954 Locate
trnS-GGA gene + 44732 44818 87 Locate
rps4 gene − 45116 45721 606 Locate
trnT-UGU gene − 46112 46184 73 Locate
trnL-UAA gene + 46858 47431 574 Locate
trnF-GAA gene + 47723 47795 73 Locate
ndhJ gene − 48464 48940 477 Locate
ndhK gene − 49041 49718 678 Locate
ndhC gene − 49772 50134 363 Locate
trnV-UAC gene − 51100 51752 653 Locate
trnM-CAU gene + 51941 52013 73 Locate
atpE gene − 52231 52632 402 Locate
atpB gene − 52629 54125 1497 Locate
rbcL gene + 54907 56361 1455 Locate
accD gene + 57047 58513 1467 Locate
psaI gene + 59202 59312 111 Locate
ycf4 gene + 59743 60297 555 Locate
cemA gene + 60858 61547 690 Locate
petA gene + 61764 62726 963 Locate
psbJ gene − 63773 63895 123 Locate
psbL gene − 64033 64149 117 Locate
psbF gene − 64173 64292 120 Locate
psbE gene − 64307 64558 252 Locate
petL gene + 65491 65586 96 Locate
petG gene + 65761 65874 114 Locate
trnW-CCA gene − 66000 66073 74 Locate
trnP-UGG gene − 66243 66316 74 Locate
psaJ gene + 66591 66725 135 Locate
rpl33 gene + 67197 67397 201 Locate
rps18 gene + 67544 67849 306 Locate
rpl20 gene − 68029 68415 387 Locate
rps12 gene − 69182 69295 114 Locate
clpP gene − 69422 71287 1866 Locate
psbB gene + 71725 73251 1527 Locate
psbT gene + 73445 73552 108 Locate
psbN gene − 73613 73744 132 Locate
psbH gene + 73848 74069 222 Locate
petB gene + 74184 75564 1381 Locate
petD gene + 75759 76980 1222 Locate
rpoA gene − 77143 78156 1014 Locate
rps11 gene − 78228 78659 432 Locate
rpl36 gene − 78747 78860 114 Locate
infA gene − 78956 79189 234 Locate
rps8 gene − 79318 79731 414 Locate
rpl14 gene − 79922 80290 369 Locate
rpl16 gene − 80417 81723 1307 Locate
rps3 gene − 81870 82532 663 Locate
rpl22 gene − 82517 82981 465 Locate
rps19 gene − 83041 83319 279 Locate
rpl2 gene − 83371 84862 1492 Locate
rpl23 gene − 84881 85162 282 Locate
trnI-CAU gene − 85328 85401 74 Locate
ycf2 gene + 85490 92374 6885 Locate
ycf15 gene + 92417 92665 249 Locate
trnL-CAA gene − 92926 93006 81 Locate
ndhB gene − 93542 95753 2212 Locate
rps7 gene − 96028 96495 468 Locate
rps12 gene − 96549 97342 794 Locate
trnV-GAC gene + 98959 99030 72 Locate
rrn16 gene + 99258 100748 1491 Locate
trnI-GAU gene + 101038 102046 1009 Locate
trnA-UGC gene + 102111 102989 879 Locate
rrn23 gene + 103182 105991 2810 Locate
rrn4.5 gene + 106090 106192 103 Locate
rrn5 gene + 106448 106568 121 Locate
trnR-ACG gene + 106803 106876 74 Locate
trnN-GUU gene − 107443 107514 72 Locate
ndhF gene − 108904 111120 2217 Locate
rpl32 gene + 111631 111807 177 Locate
trnL-UAG gene + 112531 112610 80 Locate
ccsA gene + 112695 113666 972 Locate
ndhD gene − 113849 115369 1521 Locate
psaC gene − 115468 115713 246 Locate
ndhE gene − 115976 116281 306 Locate
ndhG gene − 116503 117033 531 Locate
ndhI gene − 117412 117918 507 Locate
ndhA gene − 118005 120163 2159 Locate
ndhH gene − 120165 121346 1182 Locate
rps15 gene − 121447 121782 336 Locate
ycf1 gene − 122100 127652 5553 Locate
trnN-GUU gene + 127978 128049 72 Locate
trnR-ACG gene − 128616 128689 74 Locate
rrn5 gene − 128924 129044 121 Locate
rrn4.5 gene − 129300 129402 103 Locate
rrn23 gene − 129501 132310 2810 Locate
trnA-UGC gene − 132503 133381 879 Locate
trnI-GAU gene − 133446 134454 1009 Locate
rrn16 gene − 134744 136234 1491 Locate
trnV-GAC gene − 136462 136533 72 Locate
rps12 gene + 138150 138943 794 Locate
rps7 gene + 138997 139464 468 Locate
ndhB gene + 139739 141950 2212 Locate
trnL-CAA gene + 142486 142566 81 Locate
ycf15 gene − 142827 143090 264 Locate
ycf2 gene − 143118 150002 6885 Locate
trnI-CAU gene + 150091 150164 74 Locate
rpl23 gene + 150330 150611 282 Locate
rpl2 gene + 150630 152121 1492 Locate
Status Available
Accession OR565955.1
Length 152,214 bp
GC content 38.4%
Annotated genes 132
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 14 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources