Paraphlomis membranacea chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · OR565959.1 · 2–76 bp · −
psbA · OR565959.1 · 308–1,366 bp · −
trnK-UUU · OR565959.1 · 1,599–4,190 bp · −
matK · OR565959.1 · 1,906–3,441 bp · −
rps16 · OR565959.1 · 5,118–6,258 bp · −
trnQ-UUG · OR565959.1 · 7,202–7,273 bp · −
trnS-GCU · OR565959.1 · 8,407–8,494 bp · −
atpA · OR565959.1 · 10,290–11,813 bp · −
atpF · OR565959.1 · 11,901–13,123 bp · −
atpH · OR565959.1 · 13,492–13,737 bp · −
atpI · OR565959.1 · 14,737–15,480 bp · −
rps2 · OR565959.1 · 15,711–16,421 bp · −
rpoC2 · OR565959.1 · 16,721–20,830 bp · −
rpoC1 · OR565959.1 · 20,985–23,816 bp · −
rpoB · OR565959.1 · 23,843–27,055 bp · −
psbM · OR565959.1 · 29,945–30,049 bp · −
trnD-GUC · OR565959.1 · 30,573–30,646 bp · −
trnY-GUA · OR565959.1 · 30,761–30,844 bp · −
trnE-UUC · OR565959.1 · 30,904–30,973 bp · −
trnS-UGA · OR565959.1 · 35,520–35,612 bp · −
trnfM-CAU · OR565959.1 · 36,575–36,648 bp · −
rps14 · OR565959.1 · 36,798–37,100 bp · −
psaB · OR565959.1 · 37,228–39,432 bp · −
psaA · OR565959.1 · 39,458–41,710 bp · −
ycf3 · OR565959.1 · 42,438–44,395 bp · −
rps4 · OR565959.1 · 45,110–45,715 bp · −
trnT-UGU · OR565959.1 · 46,106–46,178 bp · −
ndhJ · OR565959.1 · 48,463–48,957 bp · −
ndhK · OR565959.1 · 49,040–49,717 bp · −
ndhC · OR565959.1 · 49,771–50,133 bp · −
trnV-UAC · OR565959.1 · 51,099–51,745 bp · −
atpE · OR565959.1 · 52,224–52,625 bp · −
atpB · OR565959.1 · 52,622–54,112 bp · −
psbJ · OR565959.1 · 63,810–63,932 bp · −
psbL · OR565959.1 · 64,070–64,186 bp · −
psbF · OR565959.1 · 64,210–64,329 bp · −
psbE · OR565959.1 · 64,344–64,595 bp · −
trnW-CCA · OR565959.1 · 66,034–66,107 bp · −
trnP-UGG · OR565959.1 · 66,277–66,350 bp · −
rpl20 · OR565959.1 · 68,070–68,456 bp · −
rps12 · OR565959.1 · 69,223–69,336 bp · −
rps12 · OR565959.1 · 96,601–97,394 bp · −
clpP · OR565959.1 · 69,463–71,335 bp · −
psbN · OR565959.1 · 73,661–73,792 bp · −
rpoA · OR565959.1 · 77,194–78,207 bp · −
rps11 · OR565959.1 · 78,279–78,710 bp · −
rpl36 · OR565959.1 · 78,798–78,911 bp · −
infA · OR565959.1 · 79,007–79,240 bp · −
rps8 · OR565959.1 · 79,365–79,778 bp · −
rpl14 · OR565959.1 · 79,969–80,337 bp · −
rpl16 · OR565959.1 · 80,464–81,770 bp · −
rps3 · OR565959.1 · 81,917–82,579 bp · −
rpl22 · OR565959.1 · 82,564–83,028 bp · −
rps19 · OR565959.1 · 83,088–83,366 bp · −
rpl2 · OR565959.1 · 83,419–84,910 bp · −
rpl23 · OR565959.1 · 84,929–85,210 bp · −
trnI-CAU · OR565959.1 · 85,376–85,449 bp · −
trnL-CAA · OR565959.1 · 92,974–93,054 bp · −
ndhB · OR565959.1 · 93,594–95,805 bp · −
rps7 · OR565959.1 · 96,080–96,547 bp · −
trnN-GUU · OR565959.1 · 107,495–107,566 bp · −
ndhF · OR565959.1 · 108,956–111,178 bp · −
ndhD · OR565959.1 · 113,902–115,422 bp · −
psaC · OR565959.1 · 115,521–115,766 bp · −
ndhE · OR565959.1 · 116,029–116,334 bp · −
ndhG · OR565959.1 · 116,550–117,080 bp · −
ndhI · OR565959.1 · 117,459–117,956 bp · −
ndhA · OR565959.1 · 118,043–120,197 bp · −
ndhH · OR565959.1 · 120,199–121,380 bp · −
rps15 · OR565959.1 · 121,481–121,753 bp · −
ycf1 · OR565959.1 · 122,134–127,686 bp · −
trnR-ACG · OR565959.1 · 128,650–128,723 bp · −
rrn5 · OR565959.1 · 128,958–129,078 bp · −
rrn4.5 · OR565959.1 · 129,334–129,436 bp · −
rrn23 · OR565959.1 · 129,535–132,344 bp · −
trnA-UGC · OR565959.1 · 132,537–133,415 bp · −
trnI-GAU · OR565959.1 · 133,480–134,488 bp · −
rrn16 · OR565959.1 · 134,778–136,268 bp · −
trnV-GAC · OR565959.1 · 136,496–136,567 bp · −
ycf15 · OR565959.1 · 142,865–143,128 bp · −
ycf2 · OR565959.1 · 143,156–150,040 bp · −
psbK · OR565959.1 · 7,610–7,795 bp · +
psbI · OR565959.1 · 8,173–8,283 bp · +
trnG-UCC · OR565959.1 · 9,186–9,945 bp · +
trnR-UCU · OR565959.1 · 10,122–10,193 bp · +
trnC-GCA · OR565959.1 · 28,156–28,231 bp · +
petN · OR565959.1 · 29,062–29,157 bp · +
trnT-GGU · OR565959.1 · 31,536–31,606 bp · +
psbD · OR565959.1 · 32,859–33,920 bp · +
psbC · OR565959.1 · 33,868–35,289 bp · +
psbZ · OR565959.1 · 35,937–36,125 bp · +
trnG-GCC · OR565959.1 · 36,355–36,425 bp · +
trnS-GGA · OR565959.1 · 44,725–44,811 bp · +
trnL-UAA · OR565959.1 · 46,863–47,436 bp · +
trnF-GAA · OR565959.1 · 47,728–47,800 bp · +
trnM-CAU · OR565959.1 · 51,934–52,006 bp · +
rbcL · OR565959.1 · 54,916–56,370 bp · +
accD · OR565959.1 · 57,076–58,542 bp · +
psaI · OR565959.1 · 59,229–59,339 bp · +
ycf4 · OR565959.1 · 59,775–60,329 bp · +
cemA · OR565959.1 · 60,897–61,586 bp · +
petA · OR565959.1 · 61,803–62,765 bp · +
petL · OR565959.1 · 65,525–65,620 bp · +
petG · OR565959.1 · 65,795–65,908 bp · +
psaJ · OR565959.1 · 66,625–66,759 bp · +
rpl33 · OR565959.1 · 67,238–67,438 bp · +
rps18 · OR565959.1 · 67,585–67,890 bp · +
rps12 · OR565959.1 · 138,184–138,977 bp · +
psbB · OR565959.1 · 71,773–73,299 bp · +
psbT · OR565959.1 · 73,493–73,600 bp · +
psbH · OR565959.1 · 73,896–74,117 bp · +
petB · OR565959.1 · 74,242–75,615 bp · +
petD · OR565959.1 · 75,810–77,031 bp · +
ycf2 · OR565959.1 · 85,538–92,422 bp · +
ycf15 · OR565959.1 · 92,465–92,713 bp · +
trnV-GAC · OR565959.1 · 99,011–99,082 bp · +
rrn16 · OR565959.1 · 99,310–100,800 bp · +
trnI-GAU · OR565959.1 · 101,090–102,098 bp · +
trnA-UGC · OR565959.1 · 102,163–103,041 bp · +
rrn23 · OR565959.1 · 103,234–106,043 bp · +
rrn4.5 · OR565959.1 · 106,142–106,244 bp · +
rrn5 · OR565959.1 · 106,500–106,620 bp · +
trnR-ACG · OR565959.1 · 106,855–106,928 bp · +
rpl32 · OR565959.1 · 111,685–111,861 bp · +
trnL-UAG · OR565959.1 · 112,584–112,663 bp · +
ccsA · OR565959.1 · 112,748–113,719 bp · +
trnN-GUU · OR565959.1 · 128,012–128,083 bp · +
rps7 · OR565959.1 · 139,031–139,498 bp · +
ndhB · OR565959.1 · 139,773–141,984 bp · +
trnL-CAA · OR565959.1 · 142,524–142,604 bp · +
trnI-CAU · OR565959.1 · 150,129–150,202 bp · +
rpl23 · OR565959.1 · 150,368–150,649 bp · +
rpl2 · OR565959.1 · 150,668–152,159 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Paraphlomis membranacea
ANNOTATED PLASTOME
OR565959.1
152,253 bp · 132 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 38063 76126 114190 152253 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
133 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 2 76 75 Locate
psbA gene − 308 1366 1059 Locate
trnK-UUU gene − 1599 4190 2592 Locate
matK gene − 1906 3441 1536 Locate
rps16 gene − 5118 6258 1141 Locate
trnQ-UUG gene − 7202 7273 72 Locate
psbK gene + 7610 7795 186 Locate
psbI gene + 8173 8283 111 Locate
trnS-GCU gene − 8407 8494 88 Locate
trnG-UCC gene + 9186 9945 760 Locate
trnR-UCU gene + 10122 10193 72 Locate
atpA gene − 10290 11813 1524 Locate
atpF gene − 11901 13123 1223 Locate
atpH gene − 13492 13737 246 Locate
atpI gene − 14737 15480 744 Locate
rps2 gene − 15711 16421 711 Locate
rpoC2 gene − 16721 20830 4110 Locate
rpoC1 gene − 20985 23816 2832 Locate
rpoB gene − 23843 27055 3213 Locate
trnC-GCA gene + 28156 28231 76 Locate
petN gene + 29062 29157 96 Locate
psbM gene − 29945 30049 105 Locate
trnD-GUC gene − 30573 30646 74 Locate
trnY-GUA gene − 30761 30844 84 Locate
trnE-UUC gene − 30904 30973 70 Locate
trnT-GGU gene + 31536 31606 71 Locate
psbD gene + 32859 33920 1062 Locate
psbC gene + 33868 35289 1422 Locate
trnS-UGA gene − 35520 35612 93 Locate
psbZ gene + 35937 36125 189 Locate
trnG-GCC gene + 36355 36425 71 Locate
trnfM-CAU gene − 36575 36648 74 Locate
rps14 gene − 36798 37100 303 Locate
psaB gene − 37228 39432 2205 Locate
psaA gene − 39458 41710 2253 Locate
ycf3 gene − 42438 44395 1958 Locate
trnS-GGA gene + 44725 44811 87 Locate
rps4 gene − 45110 45715 606 Locate
trnT-UGU gene − 46106 46178 73 Locate
trnL-UAA gene + 46863 47436 574 Locate
trnF-GAA gene + 47728 47800 73 Locate
ndhJ gene − 48463 48957 495 Locate
ndhK gene − 49040 49717 678 Locate
ndhC gene − 49771 50133 363 Locate
trnV-UAC gene − 51099 51745 647 Locate
trnM-CAU gene + 51934 52006 73 Locate
atpE gene − 52224 52625 402 Locate
atpB gene − 52622 54112 1491 Locate
rbcL gene + 54916 56370 1455 Locate
accD gene + 57076 58542 1467 Locate
psaI gene + 59229 59339 111 Locate
ycf4 gene + 59775 60329 555 Locate
cemA gene + 60897 61586 690 Locate
petA gene + 61803 62765 963 Locate
psbJ gene − 63810 63932 123 Locate
psbL gene − 64070 64186 117 Locate
psbF gene − 64210 64329 120 Locate
psbE gene − 64344 64595 252 Locate
petL gene + 65525 65620 96 Locate
petG gene + 65795 65908 114 Locate
trnW-CCA gene − 66034 66107 74 Locate
trnP-UGG gene − 66277 66350 74 Locate
psaJ gene + 66625 66759 135 Locate
rpl33 gene + 67238 67438 201 Locate
rps18 gene + 67585 67890 306 Locate
rpl20 gene − 68070 68456 387 Locate
rps12 gene − 69223 69336 114 Locate
clpP gene − 69463 71335 1873 Locate
psbB gene + 71773 73299 1527 Locate
psbT gene + 73493 73600 108 Locate
psbN gene − 73661 73792 132 Locate
psbH gene + 73896 74117 222 Locate
petB gene + 74242 75615 1374 Locate
petD gene + 75810 77031 1222 Locate
rpoA gene − 77194 78207 1014 Locate
rps11 gene − 78279 78710 432 Locate
rpl36 gene − 78798 78911 114 Locate
infA gene − 79007 79240 234 Locate
rps8 gene − 79365 79778 414 Locate
rpl14 gene − 79969 80337 369 Locate
rpl16 gene − 80464 81770 1307 Locate
rps3 gene − 81917 82579 663 Locate
rpl22 gene − 82564 83028 465 Locate
rps19 gene − 83088 83366 279 Locate
rpl2 gene − 83419 84910 1492 Locate
rpl23 gene − 84929 85210 282 Locate
trnI-CAU gene − 85376 85449 74 Locate
ycf2 gene + 85538 92422 6885 Locate
ycf15 gene + 92465 92713 249 Locate
trnL-CAA gene − 92974 93054 81 Locate
ndhB gene − 93594 95805 2212 Locate
rps7 gene − 96080 96547 468 Locate
rps12 gene − 96601 97394 794 Locate
trnV-GAC gene + 99011 99082 72 Locate
rrn16 gene + 99310 100800 1491 Locate
trnI-GAU gene + 101090 102098 1009 Locate
trnA-UGC gene + 102163 103041 879 Locate
rrn23 gene + 103234 106043 2810 Locate
rrn4.5 gene + 106142 106244 103 Locate
rrn5 gene + 106500 106620 121 Locate
trnR-ACG gene + 106855 106928 74 Locate
trnN-GUU gene − 107495 107566 72 Locate
ndhF gene − 108956 111178 2223 Locate
rpl32 gene + 111685 111861 177 Locate
trnL-UAG gene + 112584 112663 80 Locate
ccsA gene + 112748 113719 972 Locate
ndhD gene − 113902 115422 1521 Locate
psaC gene − 115521 115766 246 Locate
ndhE gene − 116029 116334 306 Locate
ndhG gene − 116550 117080 531 Locate
ndhI gene − 117459 117956 498 Locate
ndhA gene − 118043 120197 2155 Locate
ndhH gene − 120199 121380 1182 Locate
rps15 gene − 121481 121753 273 Locate
ycf1 gene − 122134 127686 5553 Locate
trnN-GUU gene + 128012 128083 72 Locate
trnR-ACG gene − 128650 128723 74 Locate
rrn5 gene − 128958 129078 121 Locate
rrn4.5 gene − 129334 129436 103 Locate
rrn23 gene − 129535 132344 2810 Locate
trnA-UGC gene − 132537 133415 879 Locate
trnI-GAU gene − 133480 134488 1009 Locate
rrn16 gene − 134778 136268 1491 Locate
trnV-GAC gene − 136496 136567 72 Locate
rps12 gene + 138184 138977 794 Locate
rps7 gene + 139031 139498 468 Locate
ndhB gene + 139773 141984 2212 Locate
trnL-CAA gene + 142524 142604 81 Locate
ycf15 gene − 142865 143128 264 Locate
ycf2 gene − 143156 150040 6885 Locate
trnI-CAU gene + 150129 150202 74 Locate
rpl23 gene + 150368 150649 282 Locate
rpl2 gene + 150668 152159 1492 Locate
Status Available
Accession OR565959.1
Length 152,253 bp
GC content 38.4%
Annotated genes 132
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 14 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources