Coordinate-aware organelle record

Paraphlomis reflexa chloroplast genome

Available OR565944.1 152,128 bp 132 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	1	76	75
psbA	gene	photosystem-ii	−	306	1365	1059
trnK-UUU	gene	translation-rna	−	1597	4186	2589
matK	gene	other	−	1901	3437	1536
rps16	gene	ribosomal-protein	−	5113	6254	1141
trnQ-UUG	gene	translation-rna	−	7197	7269	72
psbK	gene	photosystem-ii	+	7605	7791	186
psbI	gene	photosystem-ii	+	8169	8280	111
trnS-GCU	gene	translation-rna	−	8404	8492	88
trnG-UCC	gene	translation-rna	+	9183	9934	751
trnR-UCU	gene	translation-rna	+	10107	10182	75
atpA	gene	atp-synthase	−	10278	11802	1524
atpF	gene	atp-synthase	−	11889	13103	1214
atpH	gene	atp-synthase	−	13470	13716	246
atpI	gene	atp-synthase	−	14716	15460	744
rps2	gene	ribosomal-protein	−	15690	16401	711
rpoC2	gene	rna-polymerase	−	16622	20819	4197
rpoC1	gene	rna-polymerase	−	20973	23805	2832
rpoB	gene	rna-polymerase	−	23831	27044	3213
trnC-GCA	gene	translation-rna	+	28145	28221	76
petN	gene	cytochrome	+	29051	29147	96
psbM	gene	photosystem-ii	−	29935	30040	105
trnD-GUC	gene	translation-rna	−	30563	30637	74
trnY-GUA	gene	translation-rna	−	30751	30835	84
trnE-UUC	gene	translation-rna	−	30894	30964	70
trnT-GGU	gene	translation-rna	+	31526	31597	71
psbD	gene	photosystem-ii	+	32846	33908	1062
psbC	gene	photosystem-ii	+	33855	35277	1422
trnS-UGA	gene	translation-rna	−	35510	35603	93
psbZ	gene	photosystem-ii	+	35928	36117	189
trnG-GCC	gene	translation-rna	+	36340	36411	71
trnfM-CAU	gene	translation-rna	−	36560	36634	74
rps14	gene	ribosomal-protein	−	36783	37086	303
psaB	gene	photosystem-i	−	37213	39418	2205
psaA	gene	photosystem-i	−	39443	41696	2253
ycf3	gene	other	−	42423	44377	1954
trnS-GGA	gene	translation-rna	+	44706	44793	87
rps4	gene	ribosomal-protein	−	45090	45696	606
trnT-UGU	gene	translation-rna	−	46088	46161	73
trnL-UAA	gene	translation-rna	+	46836	47411	575
trnF-GAA	gene	translation-rna	+	47702	47775	73
ndhJ	gene	nad-dehydrogenase	−	48437	48914	477
ndhK	gene	nad-dehydrogenase	−	49014	49692	678
ndhC	gene	nad-dehydrogenase	−	49744	50107	363
trnV-UAC	gene	translation-rna	−	51072	51725	653
trnM-CAU	gene	translation-rna	+	51914	51986	72
atpE	gene	atp-synthase	−	52203	52605	402
atpB	gene	atp-synthase	−	52601	54092	1491
rbcL	gene	other	+	54879	56346	1467
accD	gene	other	+	56992	58459	1467
psaI	gene	photosystem-i	+	59146	59257	111
ycf4	gene	other	+	59692	60247	555
cemA	gene	other	+	60807	61497	690
petA	gene	cytochrome	+	61713	62676	963
psbJ	gene	photosystem-ii	−	63720	63843	123
psbL	gene	photosystem-ii	−	63980	64097	117
psbF	gene	photosystem-ii	−	64120	64240	120
psbE	gene	photosystem-ii	−	64254	64506	252
petL	gene	cytochrome	+	65435	65531	96
petG	gene	cytochrome	+	65705	65819	114
trnW-CCA	gene	translation-rna	−	65944	66018	74
trnP-UGG	gene	translation-rna	−	66187	66261	74
psaJ	gene	photosystem-i	+	66535	66670	135
rpl33	gene	ribosomal-protein	+	67139	67340	201
rps18	gene	ribosomal-protein	+	67486	67792	306
rpl20	gene	ribosomal-protein	−	67971	68358	387
rps12	gene	ribosomal-protein	−	69113	97264	28151
rps12	gene	ribosomal-protein	+	69113	138871	69758
clpP	gene	other	−	69353	71219	1866
psbB	gene	photosystem-ii	+	71657	73184	1527
psbT	gene	photosystem-ii	+	73374	73482	108
psbN	gene	photosystem-ii	−	73542	73674	132
psbH	gene	photosystem-ii	+	73777	73999	222
petB	gene	cytochrome	+	74123	75505	1382
petD	gene	cytochrome	+	75699	76921	1222
rpoA	gene	rna-polymerase	−	77083	78097	1014
rps11	gene	ribosomal-protein	−	78168	78600	432
rpl36	gene	ribosomal-protein	−	78687	78801	114
infA	gene	other	−	78896	79130	234
rps8	gene	ribosomal-protein	−	79253	79667	414
rpl14	gene	ribosomal-protein	−	79857	80226	369
rpl16	gene	ribosomal-protein	−	80352	81659	1307
rps3	gene	ribosomal-protein	−	81805	82468	663
rpl22	gene	ribosomal-protein	−	82452	82917	465
rps19	gene	ribosomal-protein	−	82976	83255	279
rpl2	gene	ribosomal-protein	−	83306	84798	1492
rpl23	gene	ribosomal-protein	−	84816	85098	282
trnI-CAU	gene	translation-rna	−	85263	85337	74
ycf2	gene	other	+	85425	92292	6867
ycf15	gene	other	+	92334	92583	249
trnL-CAA	gene	translation-rna	−	92843	92924	81
ndhB	gene	nad-dehydrogenase	−	93463	95675	2212
rps7	gene	ribosomal-protein	−	95949	96417	468
trnV-GAC	gene	translation-rna	+	98880	98952	72
rrn16	gene	ribosomal-rna	+	99179	100670	1491
trnI-GAU	gene	translation-rna	+	100959	101968	1009
trnA-UGC	gene	translation-rna	+	102032	102911	879
rrn23	gene	ribosomal-rna	+	103103	105913	2810
rrn4.5	gene	ribosomal-rna	+	106011	106114	103
rrn5	gene	ribosomal-rna	+	106369	106490	121
trnR-ACG	gene	translation-rna	+	106724	106798	74
trnN-GUU	gene	translation-rna	−	107364	107436	72
ndhF	gene	nad-dehydrogenase	−	108825	111048	2223
rpl32	gene	ribosomal-protein	+	111554	111731	177
trnL-UAG	gene	translation-rna	+	112454	112534	80
ccsA	gene	other	+	112618	113590	972
ndhD	gene	nad-dehydrogenase	−	113772	115293	1521
psaC	gene	photosystem-i	−	115392	115638	246
ndhE	gene	nad-dehydrogenase	−	115900	116206	306
ndhG	gene	nad-dehydrogenase	−	116427	116958	531
ndhI	gene	nad-dehydrogenase	−	117338	117845	507
ndhA	gene	nad-dehydrogenase	−	117931	120091	2160
ndhH	gene	nad-dehydrogenase	−	120092	121274	1182
rps15	gene	ribosomal-protein	−	121374	121647	273
ycf1	gene	other	−	122027	127580	5553
trnN-GUU	gene	translation-rna	+	127905	127977	72
trnR-ACG	gene	translation-rna	−	128543	128617	74
rrn5	gene	ribosomal-rna	−	128851	128972	121
rrn4.5	gene	ribosomal-rna	−	129227	129330	103
rrn23	gene	ribosomal-rna	−	129428	132238	2810
trnA-UGC	gene	translation-rna	−	132430	133309	879
trnI-GAU	gene	translation-rna	−	133373	134382	1009
rrn16	gene	ribosomal-rna	−	134671	136162	1491
trnV-GAC	gene	translation-rna	−	136389	136461	72
rps7	gene	ribosomal-protein	+	138924	139392	468
ndhB	gene	nad-dehydrogenase	+	139666	141878	2212
trnL-CAA	gene	translation-rna	+	142417	142498	81
ycf15	gene	other	−	142758	143022	264
ycf2	gene	other	−	143049	149916	6867
trnI-CAU	gene	translation-rna	+	150004	150078	74
rpl23	gene	ribosomal-protein	+	150243	150525	282
rpl2	gene	ribosomal-protein	+	150543	152035	1492

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeOR565944.1DNA · accDOR565944DNA · atpBOR565944DNA · matKOR565944DNA · ndhFOR565944DNA · psbAOR565944DNA · rbcLOR565944DNA · rps12OR565944DNA · ycf1OR565944