Coordinate-aware organelle record

Paraphlomis seticalyx chloroplast genome

Available OR565940.1 152,208 bp 132 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	1	76	75
psbA	gene	photosystem-ii	−	307	1366	1059
trnK-UUU	gene	translation-rna	−	1598	4189	2591
matK	gene	other	−	1904	3440	1536
rps16	gene	ribosomal-protein	−	5114	6255	1141
trnQ-UUG	gene	translation-rna	−	7202	7275	73
psbK	gene	photosystem-ii	+	7611	7797	186
psbI	gene	photosystem-ii	+	8171	8282	111
trnS-GCU	gene	translation-rna	−	8406	8494	88
trnG-UCC	gene	translation-rna	+	9186	9946	760
trnR-UCU	gene	translation-rna	+	10122	10194	72
atpA	gene	atp-synthase	−	10290	11814	1524
atpF	gene	atp-synthase	−	11901	13123	1222
atpH	gene	atp-synthase	−	13491	13737	246
atpI	gene	atp-synthase	−	14742	15486	744
rps2	gene	ribosomal-protein	−	15716	16427	711
rpoC2	gene	rna-polymerase	−	16726	20836	4110
rpoC1	gene	rna-polymerase	−	20990	23822	2832
rpoB	gene	rna-polymerase	−	23848	27061	3213
trnC-GCA	gene	translation-rna	+	28161	28237	76
petN	gene	cytochrome	+	29073	29163	90
psbM	gene	photosystem-ii	−	29950	30055	105
trnD-GUC	gene	translation-rna	−	30578	30652	74
trnY-GUA	gene	translation-rna	−	30766	30850	84
trnE-UUC	gene	translation-rna	−	30909	30982	73
trnT-GGU	gene	translation-rna	+	31552	31623	71
psbD	gene	photosystem-ii	+	32873	33935	1062
psbC	gene	photosystem-ii	+	33882	35304	1422
trnS-UGA	gene	translation-rna	−	35533	35626	93
psbZ	gene	photosystem-ii	+	35950	36139	189
trnG-GCC	gene	translation-rna	+	36368	36439	71
trnfM-CAU	gene	translation-rna	−	36588	36662	74
rps14	gene	ribosomal-protein	−	36811	37114	303
psaB	gene	photosystem-i	−	37241	39446	2205
psaA	gene	photosystem-i	−	39471	41724	2253
ycf3	gene	other	−	42451	44409	1958
trnS-GGA	gene	translation-rna	+	44738	44825	87
rps4	gene	ribosomal-protein	−	45123	45729	606
trnT-UGU	gene	translation-rna	−	46119	46192	73
trnL-UAA	gene	translation-rna	+	46871	47445	574
trnF-GAA	gene	translation-rna	+	47736	47809	73
ndhJ	gene	nad-dehydrogenase	−	48484	48961	477
ndhK	gene	nad-dehydrogenase	−	49061	49739	678
ndhC	gene	nad-dehydrogenase	−	49792	50155	363
trnV-UAC	gene	translation-rna	−	51120	51767	647
trnM-CAU	gene	translation-rna	+	51955	52028	73
atpE	gene	atp-synthase	−	52245	52647	402
atpB	gene	atp-synthase	−	52643	54134	1491
rbcL	gene	other	+	54922	56398	1476
accD	gene	other	+	57071	58538	1467
psaI	gene	photosystem-i	+	59224	59335	111
ycf4	gene	other	+	59770	60325	555
cemA	gene	other	+	60892	61582	690
petA	gene	cytochrome	+	61798	62761	963
psbJ	gene	photosystem-ii	−	63805	63928	123
psbL	gene	photosystem-ii	−	64065	64182	117
psbF	gene	photosystem-ii	−	64205	64325	120
psbE	gene	photosystem-ii	−	64339	64591	252
petL	gene	cytochrome	+	65518	65614	96
petG	gene	cytochrome	+	65788	65902	114
trnW-CCA	gene	translation-rna	−	66027	66101	74
trnP-UGG	gene	translation-rna	−	66270	66344	74
psaJ	gene	photosystem-i	+	66618	66753	135
rpl33	gene	ribosomal-protein	+	67218	67419	201
rps18	gene	ribosomal-protein	+	67565	67871	306
rpl20	gene	ribosomal-protein	−	68050	68437	387
rps12	gene	ribosomal-protein	−	69222	97366	28144
rps12	gene	ribosomal-protein	+	69222	138959	69737
clpP	gene	other	−	69462	71327	1865
psbB	gene	photosystem-ii	+	71764	73291	1527
psbT	gene	photosystem-ii	+	73485	73593	108
psbN	gene	photosystem-ii	−	73653	73785	132
psbH	gene	photosystem-ii	+	73888	74110	222
petB	gene	cytochrome	+	74234	75614	1380
petD	gene	cytochrome	+	75808	77030	1222
rpoA	gene	rna-polymerase	−	77192	78206	1014
rps11	gene	ribosomal-protein	−	78277	78709	432
rpl36	gene	ribosomal-protein	−	78796	78910	114
infA	gene	other	−	79005	79239	234
rps8	gene	ribosomal-protein	−	79363	79777	414
rpl14	gene	ribosomal-protein	−	79967	80336	369
rpl16	gene	ribosomal-protein	−	80462	81769	1307
rps3	gene	ribosomal-protein	−	81915	82578	663
rpl22	gene	ribosomal-protein	−	82562	83027	465
rps19	gene	ribosomal-protein	−	83086	83365	279
rpl2	gene	ribosomal-protein	−	83417	84909	1492
rpl23	gene	ribosomal-protein	−	84927	85209	282
trnI-CAU	gene	translation-rna	−	85374	85448	74
ycf2	gene	other	+	85536	92394	6858
ycf15	gene	other	+	92436	92685	249
trnL-CAA	gene	translation-rna	−	92945	93026	81
ndhB	gene	nad-dehydrogenase	−	93565	95777	2212
rps7	gene	ribosomal-protein	−	96051	96519	468
trnV-GAC	gene	translation-rna	+	98982	99054	72
rrn16	gene	ribosomal-rna	+	99281	100772	1491
trnI-GAU	gene	translation-rna	+	101061	102070	1009
trnA-UGC	gene	translation-rna	+	102134	103013	879
rrn23	gene	ribosomal-rna	+	103205	106015	2810
rrn4.5	gene	ribosomal-rna	+	106113	106216	103
rrn5	gene	ribosomal-rna	+	106471	106592	121
trnR-ACG	gene	translation-rna	+	106826	106900	74
trnN-GUU	gene	translation-rna	−	107466	107538	72
ndhF	gene	nad-dehydrogenase	−	108927	111150	2223
rpl32	gene	ribosomal-protein	+	111654	111831	177
trnL-UAG	gene	translation-rna	+	112554	112634	80
ccsA	gene	other	+	112718	113690	972
ndhD	gene	nad-dehydrogenase	−	113872	115393	1521
psaC	gene	photosystem-i	−	115491	115737	246
ndhE	gene	nad-dehydrogenase	−	115999	116305	306
ndhG	gene	nad-dehydrogenase	−	116526	117057	531
ndhI	gene	nad-dehydrogenase	−	117435	117933	498
ndhA	gene	nad-dehydrogenase	−	118019	120179	2160
ndhH	gene	nad-dehydrogenase	−	120180	121362	1182
rps15	gene	ribosomal-protein	−	121462	121735	273
ycf1	gene	other	−	122115	127668	5553
trnN-GUU	gene	translation-rna	+	127993	128065	72
trnR-ACG	gene	translation-rna	−	128631	128705	74
rrn5	gene	ribosomal-rna	−	128939	129060	121
rrn4.5	gene	ribosomal-rna	−	129315	129418	103
rrn23	gene	ribosomal-rna	−	129516	132326	2810
trnA-UGC	gene	translation-rna	−	132518	133397	879
trnI-GAU	gene	translation-rna	−	133461	134470	1009
rrn16	gene	ribosomal-rna	−	134759	136250	1491
trnV-GAC	gene	translation-rna	−	136477	136549	72
rps7	gene	ribosomal-protein	+	139012	139480	468
ndhB	gene	nad-dehydrogenase	+	139754	141966	2212
trnL-CAA	gene	translation-rna	+	142505	142586	81
ycf15	gene	other	−	142846	143095	249
ycf2	gene	other	−	143137	149995	6858
trnI-CAU	gene	translation-rna	+	150083	150157	74
rpl23	gene	ribosomal-protein	+	150322	150604	282
rpl2	gene	ribosomal-protein	+	150622	152114	1492

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeOR565940.1DNA · accDOR565940DNA · atpBOR565940DNA · matKOR565940DNA · ndhFOR565940DNA · psbAOR565940DNA · rbcLOR565940DNA · rps12OR565940DNA · ycf1OR565940