Coordinate-aware organelle record

Paraphlomis setulosa chloroplast genome

Available OR565960.1 152,254 bp 132 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	1	76	75
psbA	gene	photosystem-ii	−	306	1365	1059
trnK-UUU	gene	translation-rna	−	1597	4181	2584
matK	gene	other	−	1896	3432	1536
rps16	gene	ribosomal-protein	−	5108	6254	1146
trnQ-UUG	gene	translation-rna	−	7201	7274	73
psbK	gene	photosystem-ii	+	7610	7796	186
psbI	gene	photosystem-ii	+	8174	8285	111
trnS-GCU	gene	translation-rna	−	8407	8495	88
trnG-UCC	gene	translation-rna	+	9185	9936	751
trnR-UCU	gene	translation-rna	+	10112	10184	72
atpA	gene	atp-synthase	−	10280	11804	1524
atpF	gene	atp-synthase	−	11891	13112	1221
atpH	gene	atp-synthase	−	13477	13723	246
atpI	gene	atp-synthase	−	14773	15517	744
rps2	gene	ribosomal-protein	−	15747	16458	711
rpoC2	gene	rna-polymerase	−	16678	20866	4188
rpoC1	gene	rna-polymerase	−	21020	23851	2831
rpoB	gene	rna-polymerase	−	23877	27090	3213
trnC-GCA	gene	translation-rna	+	28191	28267	76
petN	gene	cytochrome	+	29097	29193	96
psbM	gene	photosystem-ii	−	29980	30085	105
trnD-GUC	gene	translation-rna	−	30608	30682	74
trnY-GUA	gene	translation-rna	−	30796	30880	84
trnE-UUC	gene	translation-rna	−	30939	31012	73
trnT-GGU	gene	translation-rna	+	31571	31642	71
psbD	gene	photosystem-ii	+	32892	33954	1062
psbC	gene	photosystem-ii	+	33901	35323	1422
trnS-UGA	gene	translation-rna	−	35555	35648	93
psbZ	gene	photosystem-ii	+	35964	36153	189
trnG-GCC	gene	translation-rna	+	36377	36448	71
trnfM-CAU	gene	translation-rna	−	36597	36671	74
rps14	gene	ribosomal-protein	−	36820	37123	303
psaB	gene	photosystem-i	−	37250	39455	2205
psaA	gene	photosystem-i	−	39480	41733	2253
ycf3	gene	other	−	42460	44414	1954
trnS-GGA	gene	translation-rna	+	44730	44817	87
rps4	gene	ribosomal-protein	−	45114	45720	606
trnT-UGU	gene	translation-rna	−	46110	46183	73
trnL-UAA	gene	translation-rna	+	46856	47430	574
trnF-GAA	gene	translation-rna	+	47721	47794	73
ndhJ	gene	nad-dehydrogenase	−	48462	48939	477
ndhK	gene	nad-dehydrogenase	−	49039	49717	678
ndhC	gene	nad-dehydrogenase	−	49770	50133	363
trnV-UAC	gene	translation-rna	−	51098	51751	653
trnM-CAU	gene	translation-rna	+	51939	52012	73
atpE	gene	atp-synthase	−	52229	52631	402
atpB	gene	atp-synthase	−	52627	54124	1497
rbcL	gene	other	+	54905	56360	1455
accD	gene	other	+	57045	58512	1467
psaI	gene	photosystem-i	+	59200	59311	111
ycf4	gene	other	+	59741	60296	555
cemA	gene	other	+	60856	61546	690
petA	gene	cytochrome	+	61762	62725	963
psbJ	gene	photosystem-ii	−	63771	63894	123
psbL	gene	photosystem-ii	−	64031	64148	117
psbF	gene	photosystem-ii	−	64171	64291	120
psbE	gene	photosystem-ii	−	64305	64557	252
petL	gene	cytochrome	+	65488	65584	96
petG	gene	cytochrome	+	65758	65872	114
trnW-CCA	gene	translation-rna	−	65997	66071	74
trnP-UGG	gene	translation-rna	−	66240	66314	74
psaJ	gene	photosystem-i	+	66588	66723	135
rpl33	gene	ribosomal-protein	+	67194	67395	201
rps18	gene	ribosomal-protein	+	67541	67847	306
rpl20	gene	ribosomal-protein	−	68026	68413	387
rps12	gene	ribosomal-protein	−	69179	97379	28200
rps12	gene	ribosomal-protein	+	69179	138983	69804
clpP	gene	other	−	69419	71284	1865
psbB	gene	photosystem-ii	+	71721	73248	1527
psbT	gene	photosystem-ii	+	73440	73548	108
psbN	gene	photosystem-ii	−	73608	73740	132
psbH	gene	photosystem-ii	+	73843	74065	222
petB	gene	cytochrome	+	74179	75560	1381
petD	gene	cytochrome	+	75754	76976	1222
rpoA	gene	rna-polymerase	−	77138	78152	1014
rps11	gene	ribosomal-protein	−	78223	78655	432
rpl36	gene	ribosomal-protein	−	78742	78856	114
infA	gene	other	−	78951	79185	234
rps8	gene	ribosomal-protein	−	79313	79727	414
rpl14	gene	ribosomal-protein	−	79917	80286	369
rpl16	gene	ribosomal-protein	−	80453	81760	1307
rps3	gene	ribosomal-protein	−	81906	82569	663
rpl22	gene	ribosomal-protein	−	82553	83018	465
rps19	gene	ribosomal-protein	−	83077	83356	279
rpl2	gene	ribosomal-protein	−	83407	84899	1492
rpl23	gene	ribosomal-protein	−	84917	85199	282
trnI-CAU	gene	translation-rna	−	85364	85438	74
ycf2	gene	other	+	85526	92411	6885
ycf15	gene	other	+	92453	92702	249
trnL-CAA	gene	translation-rna	−	92962	93043	81
ndhB	gene	nad-dehydrogenase	−	93578	95790	2212
rps7	gene	ribosomal-protein	−	96064	96532	468
trnV-GAC	gene	translation-rna	+	98995	99067	72
rrn16	gene	ribosomal-rna	+	99294	100785	1491
trnI-GAU	gene	translation-rna	+	101074	102083	1009
trnA-UGC	gene	translation-rna	+	102147	103026	879
rrn23	gene	ribosomal-rna	+	103218	106028	2810
rrn4.5	gene	ribosomal-rna	+	106126	106229	103
rrn5	gene	ribosomal-rna	+	106484	106605	121
trnR-ACG	gene	translation-rna	+	106839	106912	73
trnN-GUU	gene	translation-rna	−	107479	107551	72
ndhF	gene	nad-dehydrogenase	−	108940	111157	2217
rpl32	gene	ribosomal-protein	+	111661	111838	177
trnL-UAG	gene	translation-rna	+	112561	112641	80
ccsA	gene	other	+	112725	113697	972
ndhD	gene	nad-dehydrogenase	−	113879	115400	1521
psaC	gene	photosystem-i	−	115499	115745	246
ndhE	gene	nad-dehydrogenase	−	116007	116313	306
ndhG	gene	nad-dehydrogenase	−	116534	117065	531
ndhI	gene	nad-dehydrogenase	−	117443	117950	507
ndhA	gene	nad-dehydrogenase	−	118036	120195	2159
ndhH	gene	nad-dehydrogenase	−	120196	121378	1182
rps15	gene	ribosomal-protein	−	121489	121822	333
ycf1	gene	other	−	122139	127692	5553
trnN-GUU	gene	translation-rna	+	128017	128089	72
trnR-ACG	gene	translation-rna	−	128656	128729	73
rrn5	gene	ribosomal-rna	−	128963	129084	121
rrn4.5	gene	ribosomal-rna	−	129339	129442	103
rrn23	gene	ribosomal-rna	−	129540	132350	2810
trnA-UGC	gene	translation-rna	−	132542	133421	879
trnI-GAU	gene	translation-rna	−	133485	134494	1009
rrn16	gene	ribosomal-rna	−	134783	136274	1491
trnV-GAC	gene	translation-rna	−	136501	136573	72
rps7	gene	ribosomal-protein	+	139036	139504	468
ndhB	gene	nad-dehydrogenase	+	139778	141990	2212
trnL-CAA	gene	translation-rna	+	142525	142606	81
ycf15	gene	other	−	142866	143115	249
ycf2	gene	other	−	143157	150042	6885
trnI-CAU	gene	translation-rna	+	150130	150204	74
rpl23	gene	ribosomal-protein	+	150369	150651	282
rpl2	gene	ribosomal-protein	+	150669	152161	1492

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeOR565960.1DNA · accDOR565960DNA · atpBOR565960DNA · matKOR565960DNA · ndhFOR565960DNA · psbAOR565960DNA · rbcLOR565960DNA · rps12OR565960DNA · ycf1OR565960