Coordinate-aware organelle record

Paraphlomis sp T75192-1 chloroplast genome

Available PX682502.1 152,012 bp 133 coordinate-linked features
IRIR0 kb13 kb26 kb39 kb52 kb65 kb78 kb91 kb104 kb117 kb130 kb143 kbtrnH-GUG · gene · 2-76 bp · − strandpsbA · gene · 317-1,375 bp · − strandtrnK-UUU · gene · 1,608-4,196 bp · − strandmatK · gene · 1,912-3,447 bp · − strandrps16 · gene · 5,120-6,260 bp · − strandtrnQ-UUG · gene · 7,207-7,278 bp · − strandpsbK · gene · 7,615-7,800 bp · + strandpsbI · gene · 8,170-8,280 bp · + strandtrnS-GCU · gene · 8,405-8,492 bp · − strandtrnG-UCC · gene · 9,107-9,866 bp · + strandtrnR-UCU · gene · 10,043-10,114 bp · + strandatpA · gene · 10,211-11,734 bp · − strandatpF · gene · 11,822-13,039 bp · − strandatpH · gene · 13,411-13,656 bp · − strandatpI · gene · 14,655-15,398 bp · − strandrps2 · gene · 15,629-16,339 bp · − strandrpoC2 · gene · 16,560-20,750 bp · − strandrpoC1 · gene · 20,905-23,736 bp · − strandrpoB · gene · 23,763-26,975 bp · − strandtrnC-GCA · gene · 28,084-28,159 bp · + strandpetN · gene · 28,799-28,888 bp · + strandpsbM · gene · 29,676-29,780 bp · − strandtrnD-GUC · gene · 30,304-30,377 bp · − strandtrnY-GUA · gene · 30,492-30,575 bp · − strandtrnE-UUC · tRNA · 30,635-30,704 bp · − strandtrnE-UUC · gene · 30,635-30,707 bp · − strandtrnT-GGU · gene · 31,297-31,367 bp · + strandpsbD · gene · 32,617-33,678 bp · + strandpsbC · gene · 33,626-35,047 bp · + strandtrnS-UGA · gene · 35,278-35,370 bp · − strandpsbZ · gene · 35,696-35,884 bp · + strandtrnG-GCC · gene · 36,114-36,184 bp · + strandtrnfM-CAU · gene · 36,334-36,407 bp · − strandrps14 · gene · 36,557-36,859 bp · − strandpsaB · gene · 36,987-39,191 bp · − strandpsaA · gene · 39,217-41,469 bp · − strandycf3 · gene · 42,197-44,155 bp · − strandtrnS-GGA · gene · 44,485-44,571 bp · + strandrps4 · gene · 44,889-45,494 bp · − strandtrnT-UGU · gene · 45,887-45,959 bp · − strandtrnL-UAA · gene · 46,636-47,209 bp · + strandtrnF-GAA · gene · 47,501-47,573 bp · + strandndhJ · gene · 48,242-48,718 bp · − strandndhK · gene · 48,819-49,496 bp · − strandndhC · gene · 49,550-49,912 bp · − strandtrnV-UAC · gene · 50,878-51,530 bp · − strandtrnM-CAU · gene · 51,719-51,791 bp · + strandatpE · gene · 52,010-52,411 bp · − strandatpB · gene · 52,408-53,898 bp · − strandrbcL · gene · 55,052-56,152 bp · + strandaccD · gene · 56,842-58,308 bp · + strandpsaI · gene · 58,994-59,104 bp · + strandycf4 · gene · 59,540-60,094 bp · + strandcemA · gene · 60,655-61,344 bp · + strandpetA · gene · 61,561-62,523 bp · + strandpsbJ · gene · 63,567-63,689 bp · − strandpsbL · gene · 63,827-63,943 bp · − strandpsbF · gene · 63,967-64,086 bp · − strandpsbE · gene · 64,101-64,352 bp · − strandpetL · gene · 65,282-65,377 bp · + strandpetG · gene · 65,552-65,665 bp · + strandtrnW-CCA · gene · 65,792-65,865 bp · − strandtrnP-UGG · gene · 66,035-66,108 bp · − strandpsaJ · gene · 66,383-66,517 bp · + strandrpl33 · gene · 66,990-67,190 bp · + strandrps18 · gene · 67,337-67,642 bp · + strandrpl20 · gene · 67,859-68,245 bp · − strandrps12 · gene · 69,012-97,169 bp · − strandrps12 · gene · 69,012-138,754 bp · + strandclpP · gene · 69,252-71,119 bp · − strandpsbB · gene · 71,557-73,083 bp · + strandpsbT · gene · 73,276-73,383 bp · + strandpsbN · gene · 73,444-73,575 bp · − strandpsbH · gene · 73,679-73,900 bp · + strandpetB · gene · 74,025-75,400 bp · + strandpetD · gene · 75,603-76,824 bp · + strandrpoA · gene · 76,987-78,000 bp · − strandrps11 · gene · 78,072-78,503 bp · − strandrpl36 · gene · 78,591-78,704 bp · − strandinfA · gene · 78,800-79,033 bp · − strandrps8 · gene · 79,157-79,570 bp · − strandrpl14 · gene · 79,762-80,130 bp · − strandrpl16 · gene · 80,257-81,563 bp · − strandrps3 · gene · 81,710-82,372 bp · − strandrpl22 · gene · 82,357-82,821 bp · − strandrps19 · gene · 82,881-83,159 bp · − strandrpl2 · gene · 83,212-84,703 bp · − strandrpl23 · gene · 84,722-85,003 bp · − strandtrnI-CAU · gene · 85,169-85,242 bp · − strandycf2 · gene · 85,331-92,197 bp · + strandycf15 · gene · 92,225-92,488 bp · + strandtrnL-CAA · gene · 92,749-92,829 bp · − strandndhB · gene · 93,369-95,580 bp · − strandrps7 · gene · 95,855-96,322 bp · − strandtrnV-GAC · gene · 98,786-98,857 bp · + strandrrn16 · gene · 99,085-100,575 bp · + strandtrnI-GAU · gene · 100,865-101,873 bp · + strandtrnA-UGC · gene · 101,938-102,816 bp · + strandrrn23 · gene · 103,009-105,818 bp · + strandrrn4.5 · gene · 105,917-106,019 bp · + strandrrn5 · gene · 106,275-106,395 bp · + strandtrnR-ACG · gene · 106,630-106,703 bp · + strandtrnN-GUU · gene · 107,264-107,335 bp · − strandndhF · gene · 108,725-110,947 bp · − strandrpl32 · gene · 111,453-111,629 bp · + strandtrnL-UAG · gene · 112,353-112,432 bp · + strandccsA · gene · 112,517-113,482 bp · + strandndhD · gene · 113,665-115,194 bp · − strandpsaC · gene · 115,284-115,529 bp · − strandndhE · gene · 115,792-116,097 bp · − strandndhG · gene · 116,313-116,843 bp · − strandndhI · gene · 117,222-117,728 bp · − strandndhA · gene · 117,815-119,980 bp · − strandndhH · gene · 119,982-121,163 bp · − strandrps15 · gene · 121,264-121,536 bp · − strandycf1 · gene · 121,917-127,469 bp · − strandtrnN-GUU · gene · 127,795-127,866 bp · + strandtrnR-ACG · gene · 128,427-128,500 bp · − strandrrn5 · gene · 128,735-128,855 bp · − strandrrn4.5 · gene · 129,111-129,213 bp · − strandrrn23 · gene · 129,312-132,121 bp · − strandtrnA-UGC · gene · 132,314-133,192 bp · − strandtrnI-GAU · gene · 133,257-134,265 bp · − strandrrn16 · gene · 134,555-136,045 bp · − strandtrnV-GAC · gene · 136,273-136,344 bp · − strandrps7 · gene · 138,808-139,275 bp · + strandndhB · gene · 139,550-141,761 bp · + strandtrnL-CAA · gene · 142,301-142,381 bp · + strandycf15 · gene · 142,642-142,905 bp · − strandycf2 · gene · 142,933-149,799 bp · − strandtrnI-CAU · gene · 149,888-149,961 bp · + strandrpl23 · gene · 150,127-150,408 bp · + strandrpl2 · gene · 150,427-151,918 bp · + strandParaphlomis sp T75192-1ANNOTATED PLASTOMEPX682502.1152,012 bp · 133 genesOuter ring: forward strand · inner ring: reverse strand · click a gene to open its pageGene functionTranslation RnaPhotosystem IiOtherRibosomal ProteinAtp SynthaseRna PolymeraseCytochromePhotosystem INad DehydrogenaseRibosomal RnaVerified annotationSource: NCBI GenBankAccession: PX682502.1Features: 133 coordinate-linked genesHover for coordinates · click for gene page

Gene-position browser

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133 features
GeneTypeGroupStrandStartEndLength
trnH-GUGgenetranslation-rna−17675
psbAgenephotosystem-ii−31613751059
trnK-UUUgenetranslation-rna−160741962589
matKgeneother−191134471536
rps16generibosomal-protein−511962601141
trnQ-UUGgenetranslation-rna−7206727872
psbKgenephotosystem-ii+76147800186
psbIgenephotosystem-ii+81698280111
trnS-GCUgenetranslation-rna−8404849288
trnG-UCCgenetranslation-rna+91069866760
trnR-UCUgenetranslation-rna+100421011472
atpAgeneatp-synthase−10210117341524
atpFgeneatp-synthase−11821130391218
atpHgeneatp-synthase−1341013656246
atpIgeneatp-synthase−1465415398744
rps2generibosomal-protein−1562816339711
rpoC2generna-polymerase−16559207504191
rpoC1generna-polymerase−20904237362832
rpoBgenerna-polymerase−23762269753213
trnC-GCAgenetranslation-rna+280832815976
petNgenecytochrome+287982888890
psbMgenephotosystem-ii−2967529780105
trnD-GUCgenetranslation-rna−303033037774
trnY-GUAgenetranslation-rna−304913057584
trnE-UUCtRNAtranslation-rna−306343070470
trnE-UUCgenetranslation-rna−306343070773
trnT-GGUgenetranslation-rna+312963136771
psbDgenephotosystem-ii+32616336781062
psbCgenephotosystem-ii+33625350471422
trnS-UGAgenetranslation-rna−352773537093
psbZgenephotosystem-ii+3569535884189
trnG-GCCgenetranslation-rna+361133618471
trnfM-CAUgenetranslation-rna−363333640774
rps14generibosomal-protein−3655636859303
psaBgenephotosystem-i−36986391912205
psaAgenephotosystem-i−39216414692253
ycf3geneother−42196441551959
trnS-GGAgenetranslation-rna+444844457187
rps4generibosomal-protein−4488845494606
trnT-UGUgenetranslation-rna−458864595973
trnL-UAAgenetranslation-rna+4663547209574
trnF-GAAgenetranslation-rna+475004757373
ndhJgenenad-dehydrogenase−4824148718477
ndhKgenenad-dehydrogenase−4881849496678
ndhCgenenad-dehydrogenase−4954949912363
trnV-UACgenetranslation-rna−5087751530653
trnM-CAUgenetranslation-rna+517185179173
atpEgeneatp-synthase−5200952411402
atpBgeneatp-synthase−52407538981491
rbcLgeneother+55051561521101
accDgeneother+56841583081467
psaIgenephotosystem-i+5899359104111
ycf4geneother+5953960094555
cemAgeneother+6065461344690
petAgenecytochrome+6156062523963
psbJgenephotosystem-ii−6356663689123
psbLgenephotosystem-ii−6382663943117
psbFgenephotosystem-ii−6396664086120
psbEgenephotosystem-ii−6410064352252
petLgenecytochrome+652816537796
petGgenecytochrome+6555165665114
trnW-CCAgenetranslation-rna−657916586574
trnP-UGGgenetranslation-rna−660346610874
psaJgenephotosystem-i+6638266517135
rpl33generibosomal-protein+6698967190201
rps18generibosomal-protein+6733667642306
rpl20generibosomal-protein−6785868245387
rps12generibosomal-protein−690119716928158
rps12generibosomal-protein+6901113875469743
clpPgeneother−69251711191868
psbBgenephotosystem-ii+71556730831527
psbTgenephotosystem-ii+7327573383108
psbNgenephotosystem-ii−7344373575132
psbHgenephotosystem-ii+7367873900222
petBgenecytochrome+74024754001376
petDgenecytochrome+75602768241222
rpoAgenerna-polymerase−76986780001014
rps11generibosomal-protein−7807178503432
rpl36generibosomal-protein−7859078704114
infAgeneother−7879979033234
rps8generibosomal-protein−7915679570414
rpl14generibosomal-protein−7976180130369
rpl16generibosomal-protein−80256815631307
rps3generibosomal-protein−8170982372663
rpl22generibosomal-protein−8235682821465
rps19generibosomal-protein−8288083159279
rpl2generibosomal-protein−83211847031492
rpl23generibosomal-protein−8472185003282
trnI-CAUgenetranslation-rna−851688524274
ycf2geneother+85330921976867
ycf15geneother+9222492488264
trnL-CAAgenetranslation-rna−927489282981
ndhBgenenad-dehydrogenase−93368955802212
rps7generibosomal-protein−9585496322468
trnV-GACgenetranslation-rna+987859885772
rrn16generibosomal-rna+990841005751491
trnI-GAUgenetranslation-rna+1008641018731009
trnA-UGCgenetranslation-rna+101937102816879
rrn23generibosomal-rna+1030081058182810
rrn4.5generibosomal-rna+105916106019103
rrn5generibosomal-rna+106274106395121
trnR-ACGgenetranslation-rna+10662910670374
trnN-GUUgenetranslation-rna−10726310733572
ndhFgenenad-dehydrogenase−1087241109472223
rpl32generibosomal-protein+111452111629177
trnL-UAGgenetranslation-rna+11235211243280
ccsAgeneother+112516113482966
ndhDgenenad-dehydrogenase−1136641151941530
psaCgenephotosystem-i−115283115529246
ndhEgenenad-dehydrogenase−115791116097306
ndhGgenenad-dehydrogenase−116312116843531
ndhIgenenad-dehydrogenase−117221117728507
ndhAgenenad-dehydrogenase−1178141199802166
ndhHgenenad-dehydrogenase−1199811211631182
rps15generibosomal-protein−121263121536273
ycf1geneother−1219161274695553
trnN-GUUgenetranslation-rna+12779412786672
trnR-ACGgenetranslation-rna−12842612850074
rrn5generibosomal-rna−128734128855121
rrn4.5generibosomal-rna−129110129213103
rrn23generibosomal-rna−1293111321212810
trnA-UGCgenetranslation-rna−132313133192879
trnI-GAUgenetranslation-rna−1332561342651009
rrn16generibosomal-rna−1345541360451491
trnV-GACgenetranslation-rna−13627213634472
rps7generibosomal-protein+138807139275468
ndhBgenenad-dehydrogenase+1395491417612212
trnL-CAAgenetranslation-rna+14230014238181
ycf15geneother−142641142905264
ycf2geneother−1429321497996867
trnI-CAUgenetranslation-rna+14988714996174
rpl23generibosomal-protein+150126150408282
rpl2generibosomal-protein+1504261519181492

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Full species sources