Paraphlomis sp T75192-1 chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · PX682502.1 · 2–76 bp · −
psbA · PX682502.1 · 317–1,375 bp · −
trnK-UUU · PX682502.1 · 1,608–4,196 bp · −
matK · PX682502.1 · 1,912–3,447 bp · −
rps16 · PX682502.1 · 5,120–6,260 bp · −
trnQ-UUG · PX682502.1 · 7,207–7,278 bp · −
trnS-GCU · PX682502.1 · 8,405–8,492 bp · −
atpA · PX682502.1 · 10,211–11,734 bp · −
atpF · PX682502.1 · 11,822–13,039 bp · −
atpH · PX682502.1 · 13,411–13,656 bp · −
atpI · PX682502.1 · 14,655–15,398 bp · −
rps2 · PX682502.1 · 15,629–16,339 bp · −
rpoC2 · PX682502.1 · 16,560–20,750 bp · −
rpoC1 · PX682502.1 · 20,905–23,736 bp · −
rpoB · PX682502.1 · 23,763–26,975 bp · −
psbM · PX682502.1 · 29,676–29,780 bp · −
trnD-GUC · PX682502.1 · 30,304–30,377 bp · −
trnY-GUA · PX682502.1 · 30,492–30,575 bp · −
trnE-UUC · PX682502.1 · 30,635–30,704 bp · −
trnE-UUC · PX682502.1 · 30,635–30,707 bp · −
trnS-UGA · PX682502.1 · 35,278–35,370 bp · −
trnfM-CAU · PX682502.1 · 36,334–36,407 bp · −
rps14 · PX682502.1 · 36,557–36,859 bp · −
psaB · PX682502.1 · 36,987–39,191 bp · −
psaA · PX682502.1 · 39,217–41,469 bp · −
ycf3 · PX682502.1 · 42,197–44,155 bp · −
rps4 · PX682502.1 · 44,889–45,494 bp · −
trnT-UGU · PX682502.1 · 45,887–45,959 bp · −
ndhJ · PX682502.1 · 48,242–48,718 bp · −
ndhK · PX682502.1 · 48,819–49,496 bp · −
ndhC · PX682502.1 · 49,550–49,912 bp · −
trnV-UAC · PX682502.1 · 50,878–51,530 bp · −
atpE · PX682502.1 · 52,010–52,411 bp · −
atpB · PX682502.1 · 52,408–53,898 bp · −
psbJ · PX682502.1 · 63,567–63,689 bp · −
psbL · PX682502.1 · 63,827–63,943 bp · −
psbF · PX682502.1 · 63,967–64,086 bp · −
psbE · PX682502.1 · 64,101–64,352 bp · −
trnW-CCA · PX682502.1 · 65,792–65,865 bp · −
trnP-UGG · PX682502.1 · 66,035–66,108 bp · −
rpl20 · PX682502.1 · 67,859–68,245 bp · −
rps12 · PX682502.1 · 69,012–69,125 bp · −
rps12 · PX682502.1 · 96,376–97,169 bp · −
clpP · PX682502.1 · 69,252–71,119 bp · −
psbN · PX682502.1 · 73,444–73,575 bp · −
rpoA · PX682502.1 · 76,987–78,000 bp · −
rps11 · PX682502.1 · 78,072–78,503 bp · −
rpl36 · PX682502.1 · 78,591–78,704 bp · −
infA · PX682502.1 · 78,800–79,033 bp · −
rps8 · PX682502.1 · 79,157–79,570 bp · −
rpl14 · PX682502.1 · 79,762–80,130 bp · −
rpl16 · PX682502.1 · 80,257–81,563 bp · −
rps3 · PX682502.1 · 81,710–82,372 bp · −
rpl22 · PX682502.1 · 82,357–82,821 bp · −
rps19 · PX682502.1 · 82,881–83,159 bp · −
rpl2 · PX682502.1 · 83,212–84,703 bp · −
rpl23 · PX682502.1 · 84,722–85,003 bp · −
trnI-CAU · PX682502.1 · 85,169–85,242 bp · −
trnL-CAA · PX682502.1 · 92,749–92,829 bp · −
ndhB · PX682502.1 · 93,369–95,580 bp · −
rps7 · PX682502.1 · 95,855–96,322 bp · −
trnN-GUU · PX682502.1 · 107,264–107,335 bp · −
ndhF · PX682502.1 · 108,725–110,947 bp · −
ndhD · PX682502.1 · 113,665–115,194 bp · −
psaC · PX682502.1 · 115,284–115,529 bp · −
ndhE · PX682502.1 · 115,792–116,097 bp · −
ndhG · PX682502.1 · 116,313–116,843 bp · −
ndhI · PX682502.1 · 117,222–117,728 bp · −
ndhA · PX682502.1 · 117,815–119,980 bp · −
ndhH · PX682502.1 · 119,982–121,163 bp · −
rps15 · PX682502.1 · 121,264–121,536 bp · −
ycf1 · PX682502.1 · 121,917–127,469 bp · −
trnR-ACG · PX682502.1 · 128,427–128,500 bp · −
rrn5 · PX682502.1 · 128,735–128,855 bp · −
rrn4.5 · PX682502.1 · 129,111–129,213 bp · −
rrn23 · PX682502.1 · 129,312–132,121 bp · −
trnA-UGC · PX682502.1 · 132,314–133,192 bp · −
trnI-GAU · PX682502.1 · 133,257–134,265 bp · −
rrn16 · PX682502.1 · 134,555–136,045 bp · −
trnV-GAC · PX682502.1 · 136,273–136,344 bp · −
ycf15 · PX682502.1 · 142,642–142,905 bp · −
ycf2 · PX682502.1 · 142,933–149,799 bp · −
psbK · PX682502.1 · 7,615–7,800 bp · +
psbI · PX682502.1 · 8,170–8,280 bp · +
trnG-UCC · PX682502.1 · 9,107–9,866 bp · +
trnR-UCU · PX682502.1 · 10,043–10,114 bp · +
trnC-GCA · PX682502.1 · 28,084–28,159 bp · +
petN · PX682502.1 · 28,799–28,888 bp · +
trnT-GGU · PX682502.1 · 31,297–31,367 bp · +
psbD · PX682502.1 · 32,617–33,678 bp · +
psbC · PX682502.1 · 33,626–35,047 bp · +
psbZ · PX682502.1 · 35,696–35,884 bp · +
trnG-GCC · PX682502.1 · 36,114–36,184 bp · +
trnS-GGA · PX682502.1 · 44,485–44,571 bp · +
trnL-UAA · PX682502.1 · 46,636–47,209 bp · +
trnF-GAA · PX682502.1 · 47,501–47,573 bp · +
trnM-CAU · PX682502.1 · 51,719–51,791 bp · +
rbcL · PX682502.1 · 55,052–56,152 bp · +
accD · PX682502.1 · 56,842–58,308 bp · +
psaI · PX682502.1 · 58,994–59,104 bp · +
ycf4 · PX682502.1 · 59,540–60,094 bp · +
cemA · PX682502.1 · 60,655–61,344 bp · +
petA · PX682502.1 · 61,561–62,523 bp · +
petL · PX682502.1 · 65,282–65,377 bp · +
petG · PX682502.1 · 65,552–65,665 bp · +
psaJ · PX682502.1 · 66,383–66,517 bp · +
rpl33 · PX682502.1 · 66,990–67,190 bp · +
rps18 · PX682502.1 · 67,337–67,642 bp · +
rps12 · PX682502.1 · 137,961–138,754 bp · +
psbB · PX682502.1 · 71,557–73,083 bp · +
psbT · PX682502.1 · 73,276–73,383 bp · +
psbH · PX682502.1 · 73,679–73,900 bp · +
petB · PX682502.1 · 74,025–75,400 bp · +
petD · PX682502.1 · 75,603–76,824 bp · +
ycf2 · PX682502.1 · 85,331–92,197 bp · +
ycf15 · PX682502.1 · 92,225–92,488 bp · +
trnV-GAC · PX682502.1 · 98,786–98,857 bp · +
rrn16 · PX682502.1 · 99,085–100,575 bp · +
trnI-GAU · PX682502.1 · 100,865–101,873 bp · +
trnA-UGC · PX682502.1 · 101,938–102,816 bp · +
rrn23 · PX682502.1 · 103,009–105,818 bp · +
rrn4.5 · PX682502.1 · 105,917–106,019 bp · +
rrn5 · PX682502.1 · 106,275–106,395 bp · +
trnR-ACG · PX682502.1 · 106,630–106,703 bp · +
rpl32 · PX682502.1 · 111,453–111,629 bp · +
trnL-UAG · PX682502.1 · 112,353–112,432 bp · +
ccsA · PX682502.1 · 112,517–113,482 bp · +
trnN-GUU · PX682502.1 · 127,795–127,866 bp · +
rps7 · PX682502.1 · 138,808–139,275 bp · +
ndhB · PX682502.1 · 139,550–141,761 bp · +
trnL-CAA · PX682502.1 · 142,301–142,381 bp · +
trnI-CAU · PX682502.1 · 149,888–149,961 bp · +
rpl23 · PX682502.1 · 150,127–150,408 bp · +
rpl2 · PX682502.1 · 150,427–151,918 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Paraphlomis sp T75192-1
ANNOTATED PLASTOME
PX682502.1
152,012 bp · 133 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 38003 76006 114009 152012 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
134 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 2 76 75 Locate
psbA gene − 317 1375 1059 Locate
trnK-UUU gene − 1608 4196 2589 Locate
matK gene − 1912 3447 1536 Locate
rps16 gene − 5120 6260 1141 Locate
trnQ-UUG gene − 7207 7278 72 Locate
psbK gene + 7615 7800 186 Locate
psbI gene + 8170 8280 111 Locate
trnS-GCU gene − 8405 8492 88 Locate
trnG-UCC gene + 9107 9866 760 Locate
trnR-UCU gene + 10043 10114 72 Locate
atpA gene − 10211 11734 1524 Locate
atpF gene − 11822 13039 1218 Locate
atpH gene − 13411 13656 246 Locate
atpI gene − 14655 15398 744 Locate
rps2 gene − 15629 16339 711 Locate
rpoC2 gene − 16560 20750 4191 Locate
rpoC1 gene − 20905 23736 2832 Locate
rpoB gene − 23763 26975 3213 Locate
trnC-GCA gene + 28084 28159 76 Locate
petN gene + 28799 28888 90 Locate
psbM gene − 29676 29780 105 Locate
trnD-GUC gene − 30304 30377 74 Locate
trnY-GUA gene − 30492 30575 84 Locate
trnE-UUC tRNA − 30635 30704 70 Locate
trnE-UUC gene − 30635 30707 73 Locate
trnT-GGU gene + 31297 31367 71 Locate
psbD gene + 32617 33678 1062 Locate
psbC gene + 33626 35047 1422 Locate
trnS-UGA gene − 35278 35370 93 Locate
psbZ gene + 35696 35884 189 Locate
trnG-GCC gene + 36114 36184 71 Locate
trnfM-CAU gene − 36334 36407 74 Locate
rps14 gene − 36557 36859 303 Locate
psaB gene − 36987 39191 2205 Locate
psaA gene − 39217 41469 2253 Locate
ycf3 gene − 42197 44155 1959 Locate
trnS-GGA gene + 44485 44571 87 Locate
rps4 gene − 44889 45494 606 Locate
trnT-UGU gene − 45887 45959 73 Locate
trnL-UAA gene + 46636 47209 574 Locate
trnF-GAA gene + 47501 47573 73 Locate
ndhJ gene − 48242 48718 477 Locate
ndhK gene − 48819 49496 678 Locate
ndhC gene − 49550 49912 363 Locate
trnV-UAC gene − 50878 51530 653 Locate
trnM-CAU gene + 51719 51791 73 Locate
atpE gene − 52010 52411 402 Locate
atpB gene − 52408 53898 1491 Locate
rbcL gene + 55052 56152 1101 Locate
accD gene + 56842 58308 1467 Locate
psaI gene + 58994 59104 111 Locate
ycf4 gene + 59540 60094 555 Locate
cemA gene + 60655 61344 690 Locate
petA gene + 61561 62523 963 Locate
psbJ gene − 63567 63689 123 Locate
psbL gene − 63827 63943 117 Locate
psbF gene − 63967 64086 120 Locate
psbE gene − 64101 64352 252 Locate
petL gene + 65282 65377 96 Locate
petG gene + 65552 65665 114 Locate
trnW-CCA gene − 65792 65865 74 Locate
trnP-UGG gene − 66035 66108 74 Locate
psaJ gene + 66383 66517 135 Locate
rpl33 gene + 66990 67190 201 Locate
rps18 gene + 67337 67642 306 Locate
rpl20 gene − 67859 68245 387 Locate
rps12 gene − 69012 69125 114 Locate
clpP gene − 69252 71119 1868 Locate
psbB gene + 71557 73083 1527 Locate
psbT gene + 73276 73383 108 Locate
psbN gene − 73444 73575 132 Locate
psbH gene + 73679 73900 222 Locate
petB gene + 74025 75400 1376 Locate
petD gene + 75603 76824 1222 Locate
rpoA gene − 76987 78000 1014 Locate
rps11 gene − 78072 78503 432 Locate
rpl36 gene − 78591 78704 114 Locate
infA gene − 78800 79033 234 Locate
rps8 gene − 79157 79570 414 Locate
rpl14 gene − 79762 80130 369 Locate
rpl16 gene − 80257 81563 1307 Locate
rps3 gene − 81710 82372 663 Locate
rpl22 gene − 82357 82821 465 Locate
rps19 gene − 82881 83159 279 Locate
rpl2 gene − 83212 84703 1492 Locate
rpl23 gene − 84722 85003 282 Locate
trnI-CAU gene − 85169 85242 74 Locate
ycf2 gene + 85331 92197 6867 Locate
ycf15 gene + 92225 92488 264 Locate
trnL-CAA gene − 92749 92829 81 Locate
ndhB gene − 93369 95580 2212 Locate
rps7 gene − 95855 96322 468 Locate
rps12 gene − 96376 97169 794 Locate
trnV-GAC gene + 98786 98857 72 Locate
rrn16 gene + 99085 100575 1491 Locate
trnI-GAU gene + 100865 101873 1009 Locate
trnA-UGC gene + 101938 102816 879 Locate
rrn23 gene + 103009 105818 2810 Locate
rrn4.5 gene + 105917 106019 103 Locate
rrn5 gene + 106275 106395 121 Locate
trnR-ACG gene + 106630 106703 74 Locate
trnN-GUU gene − 107264 107335 72 Locate
ndhF gene − 108725 110947 2223 Locate
rpl32 gene + 111453 111629 177 Locate
trnL-UAG gene + 112353 112432 80 Locate
ccsA gene + 112517 113482 966 Locate
ndhD gene − 113665 115194 1530 Locate
psaC gene − 115284 115529 246 Locate
ndhE gene − 115792 116097 306 Locate
ndhG gene − 116313 116843 531 Locate
ndhI gene − 117222 117728 507 Locate
ndhA gene − 117815 119980 2166 Locate
ndhH gene − 119982 121163 1182 Locate
rps15 gene − 121264 121536 273 Locate
ycf1 gene − 121917 127469 5553 Locate
trnN-GUU gene + 127795 127866 72 Locate
trnR-ACG gene − 128427 128500 74 Locate
rrn5 gene − 128735 128855 121 Locate
rrn4.5 gene − 129111 129213 103 Locate
rrn23 gene − 129312 132121 2810 Locate
trnA-UGC gene − 132314 133192 879 Locate
trnI-GAU gene − 133257 134265 1009 Locate
rrn16 gene − 134555 136045 1491 Locate
trnV-GAC gene − 136273 136344 72 Locate
rps12 gene + 137961 138754 794 Locate
rps7 gene + 138808 139275 468 Locate
ndhB gene + 139550 141761 2212 Locate
trnL-CAA gene + 142301 142381 81 Locate
ycf15 gene − 142642 142905 264 Locate
ycf2 gene − 142933 149799 6867 Locate
trnI-CAU gene + 149888 149961 74 Locate
rpl23 gene + 150127 150408 282 Locate
rpl2 gene + 150427 151918 1492 Locate
Status Available
Accession PX682502.1
Length 152,012 bp
GC content 38.4%
Annotated genes 133
Gene sequence records 0
Translation Rna 38 Photosystem Ii 15 Other 14 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 0
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources