Coordinate-aware organelle record

Paraphlomis yingdeensis chloroplast genome

Available OR565948.1 152,183 bp 132 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	1	76	75
psbA	gene	photosystem-ii	−	307	1366	1059
trnK-UUU	gene	translation-rna	−	1598	4187	2589
matK	gene	other	−	1902	3438	1536
rps16	gene	ribosomal-protein	−	5113	6254	1141
trnQ-UUG	gene	translation-rna	−	7201	7273	72
psbK	gene	photosystem-ii	+	7609	7795	186
psbI	gene	photosystem-ii	+	8170	8281	111
trnS-GCU	gene	translation-rna	−	8404	8492	88
trnG-UCC	gene	translation-rna	+	9192	9952	760
trnR-UCU	gene	translation-rna	+	10125	10200	75
atpA	gene	atp-synthase	−	10296	11820	1524
atpF	gene	atp-synthase	−	11907	13129	1222
atpH	gene	atp-synthase	−	13497	13743	246
atpI	gene	atp-synthase	−	14741	15485	744
rps2	gene	ribosomal-protein	−	15715	16426	711
rpoC2	gene	rna-polymerase	−	16646	20834	4188
rpoC1	gene	rna-polymerase	−	20988	23820	2832
rpoB	gene	rna-polymerase	−	23846	27059	3213
trnC-GCA	gene	translation-rna	+	28160	28241	81
petN	gene	cytochrome	+	29058	29154	96
psbM	gene	photosystem-ii	−	29929	30034	105
trnD-GUC	gene	translation-rna	−	30557	30631	74
trnY-GUA	gene	translation-rna	−	30745	30829	84
trnE-UUC	gene	translation-rna	−	30888	30961	73
trnT-GGU	gene	translation-rna	+	31520	31591	71
psbD	gene	photosystem-ii	+	32841	33903	1062
psbC	gene	photosystem-ii	+	33850	35272	1422
trnS-UGA	gene	translation-rna	−	35502	35595	93
psbZ	gene	photosystem-ii	+	35919	36108	189
trnG-GCC	gene	translation-rna	+	36337	36408	71
trnfM-CAU	gene	translation-rna	−	36557	36631	74
rps14	gene	ribosomal-protein	−	36780	37083	303
psaB	gene	photosystem-i	−	37210	39415	2205
psaA	gene	photosystem-i	−	39440	41693	2253
ycf3	gene	other	−	42420	44384	1964
trnS-GGA	gene	translation-rna	+	44713	44800	87
rps4	gene	ribosomal-protein	−	45098	45704	606
trnT-UGU	gene	translation-rna	−	46094	46167	73
trnL-UAA	gene	translation-rna	+	46846	47420	574
trnF-GAA	gene	translation-rna	+	47711	47784	73
ndhJ	gene	nad-dehydrogenase	−	48446	48923	477
ndhK	gene	nad-dehydrogenase	−	49023	49701	678
ndhC	gene	nad-dehydrogenase	−	49754	50117	363
trnV-UAC	gene	translation-rna	−	51082	51729	647
trnM-CAU	gene	translation-rna	+	51917	51990	73
atpE	gene	atp-synthase	−	52207	52609	402
atpB	gene	atp-synthase	−	52605	54102	1497
rbcL	gene	other	+	54896	56342	1446
accD	gene	other	+	57038	58505	1467
psaI	gene	photosystem-i	+	59191	59302	111
ycf4	gene	other	+	59737	60292	555
cemA	gene	other	+	60859	61549	690
petA	gene	cytochrome	+	61765	62728	963
psbJ	gene	photosystem-ii	−	63772	63895	123
psbL	gene	photosystem-ii	−	64032	64149	117
psbF	gene	photosystem-ii	−	64172	64292	120
psbE	gene	photosystem-ii	−	64306	64558	252
petL	gene	cytochrome	+	65477	65573	96
petG	gene	cytochrome	+	65747	65861	114
trnW-CCA	gene	translation-rna	−	65986	66060	74
trnP-UGG	gene	translation-rna	−	66229	66303	74
psaJ	gene	photosystem-i	+	66577	66712	135
rpl33	gene	ribosomal-protein	+	67184	67385	201
rps18	gene	ribosomal-protein	+	67531	67837	306
rpl20	gene	ribosomal-protein	−	68016	68403	387
rps12	gene	ribosomal-protein	−	69175	97331	28156
rps12	gene	ribosomal-protein	+	69175	138925	69750
clpP	gene	other	−	69421	71287	1866
psbB	gene	photosystem-ii	+	71724	73251	1527
psbT	gene	photosystem-ii	+	73442	73550	108
psbN	gene	photosystem-ii	−	73610	73742	132
psbH	gene	photosystem-ii	+	73845	74067	222
petB	gene	cytochrome	+	74191	75570	1379
petD	gene	cytochrome	+	75764	76986	1222
rpoA	gene	rna-polymerase	−	77148	78162	1014
rps11	gene	ribosomal-protein	−	78233	78665	432
rpl36	gene	ribosomal-protein	−	78752	78866	114
infA	gene	other	−	78961	79195	234
rps8	gene	ribosomal-protein	−	79319	79733	414
rpl14	gene	ribosomal-protein	−	79923	80292	369
rpl16	gene	ribosomal-protein	−	80418	81725	1307
rps3	gene	ribosomal-protein	−	81871	82534	663
rpl22	gene	ribosomal-protein	−	82518	82983	465
rps19	gene	ribosomal-protein	−	83042	83321	279
rpl2	gene	ribosomal-protein	−	83373	84865	1492
rpl23	gene	ribosomal-protein	−	84883	85165	282
trnI-CAU	gene	translation-rna	−	85330	85404	74
ycf2	gene	other	+	85492	92359	6867
ycf15	gene	other	+	92401	92650	249
trnL-CAA	gene	translation-rna	−	92910	92991	81
ndhB	gene	nad-dehydrogenase	−	93530	95742	2212
rps7	gene	ribosomal-protein	−	96016	96484	468
trnV-GAC	gene	translation-rna	+	98947	99019	72
rrn16	gene	ribosomal-rna	+	99246	100737	1491
trnI-GAU	gene	translation-rna	+	101026	102035	1009
trnA-UGC	gene	translation-rna	+	102099	102978	879
rrn23	gene	ribosomal-rna	+	103170	105980	2810
rrn4.5	gene	ribosomal-rna	+	106078	106181	103
rrn5	gene	ribosomal-rna	+	106436	106557	121
trnR-ACG	gene	translation-rna	+	106791	106865	74
trnN-GUU	gene	translation-rna	−	107431	107503	72
ndhF	gene	nad-dehydrogenase	−	108892	111115	2223
rpl32	gene	ribosomal-protein	+	111619	111796	177
trnL-UAG	gene	translation-rna	+	112519	112599	80
ccsA	gene	other	+	112694	113666	972
ndhD	gene	nad-dehydrogenase	−	113848	115369	1521
psaC	gene	photosystem-i	−	115466	115712	246
ndhE	gene	nad-dehydrogenase	−	115974	116280	306
ndhG	gene	nad-dehydrogenase	−	116501	117032	531
ndhI	gene	nad-dehydrogenase	−	117410	117908	498
ndhA	gene	nad-dehydrogenase	−	117994	120154	2160
ndhH	gene	nad-dehydrogenase	−	120155	121337	1182
rps15	gene	ribosomal-protein	−	121437	121773	336
ycf1	gene	other	−	122090	127634	5544
trnN-GUU	gene	translation-rna	+	127959	128031	72
trnR-ACG	gene	translation-rna	−	128597	128671	74
rrn5	gene	ribosomal-rna	−	128905	129026	121
rrn4.5	gene	ribosomal-rna	−	129281	129384	103
rrn23	gene	ribosomal-rna	−	129482	132292	2810
trnA-UGC	gene	translation-rna	−	132484	133363	879
trnI-GAU	gene	translation-rna	−	133427	134436	1009
rrn16	gene	ribosomal-rna	−	134725	136216	1491
trnV-GAC	gene	translation-rna	−	136443	136515	72
rps7	gene	ribosomal-protein	+	138978	139446	468
ndhB	gene	nad-dehydrogenase	+	139720	141932	2212
trnL-CAA	gene	translation-rna	+	142471	142552	81
ycf15	gene	other	−	142812	143076	264
ycf2	gene	other	−	143103	149970	6867
trnI-CAU	gene	translation-rna	+	150058	150132	74
rpl23	gene	ribosomal-protein	+	150297	150579	282
rpl2	gene	ribosomal-protein	+	150597	152089	1492

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeOR565948.1DNA · accDOR565948DNA · atpBOR565948DNA · matKOR565948DNA · ndhFOR565948DNA · psbAOR565948DNA · rbcLOR565948DNA · rps12OR565948DNA · ycf1OR565948