LamiOmicsDB Lamiaceae Multi-Omics Database
v1 808 species · 3 phylogenies · 6,313 gene sequences

Coordinate-aware organelle record

Perilla frutescens var. acuta chloroplast dna

Available KT220685.1 152,588 bp 125 genes
DNA resources Accession record
Perilla frutescens var. acuta chloroplast Biopython GenomeDiagram 1.79; GenBank local location segments. trnH-GUG · KT220685.1 · 3–76 bp · − psbA · KT220685.1 · 419–1,477 bp · − trnK-UUU · KT220685.1 · 1,703–4,293 bp · − matK · KT220685.1 · 2,018–3,562 bp · − rps16 · KT220685.1 · 4,830–5,964 bp · − trnQ-UUG · KT220685.1 · 7,002–7,073 bp · − trnS-GCU · KT220685.1 · 8,320–8,407 bp · − atpA · KT220685.1 · 10,217–11,740 bp · − atpF · KT220685.1 · 11,833–13,081 bp · − atpH · KT220685.1 · 13,354–13,599 bp · − atpI · KT220685.1 · 14,631–15,374 bp · − rps2 · KT220685.1 · 15,604–16,314 bp · − rpoC2 · KT220685.1 · 16,527–20,723 bp · − rpoC1 · KT220685.1 · 20,888–23,708 bp · − rpoB · KT220685.1 · 23,735–26,947 bp · − psbM · KT220685.1 · 29,491–29,595 bp · − trnD-GUC · KT220685.1 · 30,123–30,196 bp · − trnY-GUA · KT220685.1 · 30,307–30,390 bp · − trnE-UUC · KT220685.1 · 30,458–30,530 bp · − trnS-UGA · KT220685.1 · 35,143–35,225 bp · − trnfM-CAU · KT220685.1 · 36,283–36,356 bp · − rps14 · KT220685.1 · 36,506–36,808 bp · − psaB · KT220685.1 · 36,930–39,134 bp · − psaA · KT220685.1 · 39,160–41,412 bp · − ycf3 · KT220685.1 · 42,056–44,015 bp · − rps4 · KT220685.1 · 45,169–45,774 bp · − trnT-UGU · KT220685.1 · 46,228–46,300 bp · − ndhJ · KT220685.1 · 48,631–49,107 bp · − ndhK · KT220685.1 · 49,218–49,895 bp · − ndhC · KT220685.1 · 49,947–50,309 bp · − trnV-UAC · KT220685.1 · 51,304–51,946 bp · − atpE · KT220685.1 · 52,414–52,815 bp · − atpB · KT220685.1 · 52,812–54,308 bp · − psbJ · KT220685.1 · 64,164–64,286 bp · − psbL · KT220685.1 · 64,421–64,537 bp · − psbF · KT220685.1 · 64,561–64,680 bp · − psbE · KT220685.1 · 64,695–64,946 bp · − trnW-CCA · KT220685.1 · 66,314–66,387 bp · − trnP-UGG · KT220685.1 · 66,561–66,634 bp · − rpl20 · KT220685.1 · 68,425–68,811 bp · − rps12 · KT220685.1 · 69,630–69,743 bp · − rps12 · KT220685.1 · 97,581–97,809 bp · − rps12 · KT220685.1 · 97,019–97,044 bp · − clpP · KT220685.1 · 69,861–71,778 bp · − psbN · KT220685.1 · 74,099–74,230 bp · − rpoA · KT220685.1 · 77,613–78,620 bp · − rps11 · KT220685.1 · 78,691–79,107 bp · − rpl36 · KT220685.1 · 79,217–79,330 bp · − infA · KT220685.1 · 79,434–79,667 bp · − rps8 · KT220685.1 · 79,799–80,203 bp · − rpl14 · KT220685.1 · 80,379–80,747 bp · − rpl16 · KT220685.1 · 80,879–82,154 bp · − rps3 · KT220685.1 · 82,297–82,959 bp · − rpl22 · KT220685.1 · 82,944–83,411 bp · − rps19 · KT220685.1 · 83,476–83,754 bp · − rpl2 · KT220685.1 · 83,822–85,310 bp · − rpl23 · KT220685.1 · 85,329–85,610 bp · − trnI-CAU · KT220685.1 · 85,776–85,849 bp · − trnL-CAA · KT220685.1 · 93,379–93,459 bp · − ndhB · KT220685.1 · 94,035–96,179 bp · − rps7 · KT220685.1 · 96,498–96,965 bp · − trnN-GUU · KT220685.1 · 107,913–107,984 bp · − ndhF · KT220685.1 · 109,338–111,569 bp · − ndhD · KT220685.1 · 114,213–115,742 bp · − psaC · KT220685.1 · 115,842–116,087 bp · − ndhE · KT220685.1 · 116,337–116,642 bp · − ndhG · KT220685.1 · 116,865–117,395 bp · − ndhI · KT220685.1 · 117,764–118,255 bp · − ndhA · KT220685.1 · 118,336–120,469 bp · − ndhH · KT220685.1 · 120,471–121,652 bp · − rps15 · KT220685.1 · 121,752–122,024 bp · − ycf1 · KT220685.1 · 122,425–127,974 bp · − trnR-ACG · KT220685.1 · 128,936–129,009 bp · − trnA-UGC · KT220685.1 · 132,823–133,713 bp · − trnI-GAU · KT220685.1 · 133,778–134,798 bp · − trnV-GAC · KT220685.1 · 136,814–136,885 bp · − ycf15 · KT220685.1 · 143,172–143,420 bp · − ycf2 · KT220685.1 · 143,511–150,350 bp · − psbK · KT220685.1 · 7,471–7,656 bp · + psbI · KT220685.1 · 7,971–8,099 bp · + trnG-UCC · KT220685.1 · 9,100–9,848 bp · + trnR-UCU · KT220685.1 · 10,041–10,112 bp · + trnC-GCA · KT220685.1 · 28,132–28,202 bp · + petN · KT220685.1 · 28,364–28,459 bp · + trnT-GGU · KT220685.1 · 31,086–31,157 bp · + psbD · KT220685.1 · 32,466–33,527 bp · + psbC · KT220685.1 · 33,475–34,896 bp · + psbZ · KT220685.1 · 35,573–35,761 bp · + trnG-GCC · KT220685.1 · 36,038–36,108 bp · + trnS-GGA · KT220685.1 · 44,862–44,948 bp · + trnL-UAA · KT220685.1 · 46,995–47,571 bp · + trnF-GAA · KT220685.1 · 47,872–47,944 bp · + trnM-CAU · KT220685.1 · 52,127–52,199 bp · + rbcL · KT220685.1 · 55,111–56,571 bp · + accD · KT220685.1 · 57,262–58,743 bp · + psaI · KT220685.1 · 59,471–59,581 bp · + ycf4 · KT220685.1 · 60,027–60,581 bp · + cemA · KT220685.1 · 61,241–61,930 bp · + petA · KT220685.1 · 62,158–63,120 bp · + petL · KT220685.1 · 65,803–65,898 bp · + petG · KT220685.1 · 66,074–66,187 bp · + psaJ · KT220685.1 · 66,921–67,055 bp · + rpl33 · KT220685.1 · 67,505–67,705 bp · + rps18 · KT220685.1 · 67,890–68,195 bp · + rps12 · KT220685.1 · 138,479–139,269 bp · + psbB · KT220685.1 · 72,236–73,762 bp · + psbT · KT220685.1 · 73,935–74,036 bp · + psbH · KT220685.1 · 74,318–74,557 bp · + petB · KT220685.1 · 74,684–76,048 bp · + petD · KT220685.1 · 76,237–77,436 bp · + ycf2 · KT220685.1 · 85,938–92,777 bp · + ycf15 · KT220685.1 · 92,868–93,116 bp · + trnV-GAC · KT220685.1 · 99,403–99,474 bp · + trnI-GAU · KT220685.1 · 101,490–102,512 bp · + trnA-UGC · KT220685.1 · 102,575–103,465 bp · + trnR-ACG · KT220685.1 · 107,279–107,352 bp · + ycf1 · KT220685.1 · 108,314–109,384 bp · + rpl32 · KT220685.1 · 111,988–112,158 bp · + trnL-UAG · KT220685.1 · 112,824–112,903 bp · + ccsA · KT220685.1 · 112,996–113,967 bp · + trnN-GUU · KT220685.1 · 128,304–128,375 bp · + rps7 · KT220685.1 · 139,323–139,790 bp · + ndhB · KT220685.1 · 140,109–142,253 bp · + trnL-CAA · KT220685.1 · 142,829–142,909 bp · + trnI-CAU · KT220685.1 · 150,439–150,512 bp · + rpl23 · KT220685.1 · 150,678–150,959 bp · + rpl2 · KT220685.1 · 150,978–152,466 bp · + 0 kb 13 kb 26 kb 39 kb 52 kb 65 kb 78 kb 91 kb 104 kb 117 kb 130 kb 143 kb Perilla frutescens var. acuta ANNOTATED PLASTOME KT220685.1 152,588 bp · 125 genes Gene function Transfer RNA Photosystem II Other Ribosomal protein ATP synthase RNA polymerase Cytochrome Photosystem I NADH dehydrogenase

Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram.

Gene-position browser

Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.

127 local segments
GeneTypeGroupStrandStartEndLength
trnH-GUGgenetranslation-rna−37674
psbAgenephotosystem-ii−41914771059
trnK-UUUgenetranslation-rna−170342932591
matKgeneother−201835621545
rps16generibosomal-protein−483059641135
trnQ-UUGgenetranslation-rna−7002707372
psbKgenephotosystem-ii+74717656186
psbIgenephotosystem-ii+79718099129
trnS-GCUgenetranslation-rna−8320840788
trnG-UCCgenetranslation-rna+91009848749
trnR-UCUgenetranslation-rna+100411011272
atpAgeneatp-synthase−10217117401524
atpFgeneatp-synthase−11833130811249
atpHgeneatp-synthase−1335413599246
atpIgeneatp-synthase−1463115374744
rps2generibosomal-protein−1560416314711
rpoC2generna-polymerase−16527207234197
rpoC1generna-polymerase−20888237082821
rpoBgenerna-polymerase−23735269473213
trnC-GCAgenetranslation-rna+281322820271
petNgenecytochrome+283642845996
psbMgenephotosystem-ii−2949129595105
trnD-GUCgenetranslation-rna−301233019674
trnY-GUAgenetranslation-rna−303073039084
trnE-UUCgenetranslation-rna−304583053073
trnT-GGUgenetranslation-rna+310863115772
psbDgenephotosystem-ii+32466335271062
psbCgenephotosystem-ii+33475348961422
trnS-UGAgenetranslation-rna−351433522583
psbZgenephotosystem-ii+3557335761189
trnG-GCCgenetranslation-rna+360383610871
trnfM-CAUgenetranslation-rna−362833635674
rps14generibosomal-protein−3650636808303
psaBgenephotosystem-i−36930391342205
psaAgenephotosystem-i−39160414122253
ycf3geneother−42056440151960
trnS-GGAgenetranslation-rna+448624494887
rps4generibosomal-protein−4516945774606
trnT-UGUgenetranslation-rna−462284630073
trnL-UAAgenetranslation-rna+4699547571577
trnF-GAAgenetranslation-rna+478724794473
ndhJgenenad-dehydrogenase−4863149107477
ndhKgenenad-dehydrogenase−4921849895678
ndhCgenenad-dehydrogenase−4994750309363
trnV-UACgenetranslation-rna−5130451946643
trnM-CAUgenetranslation-rna+521275219973
atpEgeneatp-synthase−5241452815402
atpBgeneatp-synthase−52812543081497
rbcLgeneother+55111565711461
accDgeneother+57262587431482
psaIgenephotosystem-i+5947159581111
ycf4geneother+6002760581555
cemAgeneother+6124161930690
petAgenecytochrome+6215863120963
psbJgenephotosystem-ii−6416464286123
psbLgenephotosystem-ii−6442164537117
psbFgenephotosystem-ii−6456164680120
psbEgenephotosystem-ii−6469564946252
petLgenecytochrome+658036589896
petGgenecytochrome+6607466187114
trnW-CCAgenetranslation-rna−663146638774
trnP-UGGgenetranslation-rna−665616663474
psaJgenephotosystem-i+6692167055135
rpl33generibosomal-protein+6750567705201
rps18generibosomal-protein+6789068195306
rpl20generibosomal-protein−6842568811387
rps12generibosomal-protein−6963069743114
clpPgeneother−69861717781918
psbBgenephotosystem-ii+72236737621527
psbTgenephotosystem-ii+7393574036102
psbNgenephotosystem-ii−7409974230132
psbHgenephotosystem-ii+7431874557240
petBgenecytochrome+74684760481365
petDgenecytochrome+76237774361200
rpoAgenerna-polymerase−77613786201008
rps11generibosomal-protein−7869179107417
rpl36generibosomal-protein−7921779330114
infAgeneother−7943479667234
rps8generibosomal-protein−7979980203405
rpl14generibosomal-protein−8037980747369
rpl16generibosomal-protein−80879821541276
rps3generibosomal-protein−8229782959663
rpl22generibosomal-protein−8294483411468
rps19generibosomal-protein−8347683754279
rpl2generibosomal-protein−83822853101489
rpl23generibosomal-protein−8532985610282
trnI-CAUgenetranslation-rna−857768584974
ycf2geneother+85938927776840
ycf15geneother+9286893116249
trnL-CAAgenetranslation-rna−933799345981
ndhBgenenad-dehydrogenase−94035961792145
rps7generibosomal-protein−9649896965468
rps12generibosomal-protein−970199704426
rps12generibosomal-protein−9758197809229
trnV-GACgenetranslation-rna+994039947472
trnI-GAUgenetranslation-rna+1014901025121023
trnA-UGCgenetranslation-rna+102575103465891
trnR-ACGgenetranslation-rna+10727910735274
trnN-GUUgenetranslation-rna−10791310798472
ycf1geneother+1083141093841071
ndhFgenenad-dehydrogenase−1093381115692232
rpl32generibosomal-protein+111988112158171
trnL-UAGgenetranslation-rna+11282411290380
ccsAgeneother+112996113967972
ndhDgenenad-dehydrogenase−1142131157421530
psaCgenephotosystem-i−115842116087246
ndhEgenenad-dehydrogenase−116337116642306
ndhGgenenad-dehydrogenase−116865117395531
ndhIgenenad-dehydrogenase−117764118255492
ndhAgenenad-dehydrogenase−1183361204692134
ndhHgenenad-dehydrogenase−1204711216521182
rps15generibosomal-protein−121752122024273
ycf1geneother−1224251279745550
trnN-GUUgenetranslation-rna+12830412837572
trnR-ACGgenetranslation-rna−12893612900974
trnA-UGCgenetranslation-rna−132823133713891
trnI-GAUgenetranslation-rna−1337781347981021
trnV-GACgenetranslation-rna−13681413688572
rps12generibosomal-protein+138479139269791
rps7generibosomal-protein+139323139790468
ndhBgenenad-dehydrogenase+1401091422532145
trnL-CAAgenetranslation-rna+14282914290981
ycf15geneother−143172143420249
ycf2geneother−1435111503506840
trnI-CAUgenetranslation-rna+15043915051274
rpl23generibosomal-protein+150678150959282
rpl2generibosomal-protein+1509781524661489

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources
Chloroplast DNAKT220685.1DNA · accDKT220685DNA · atpBKT220685DNA · matKKT220685DNA · ndhFKT220685DNA · psbAKT220685DNA · rbcLKT220685DNA · rps12KT220685DNA · ycf1KT220685