Perilla frutescens var. frutescens chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
trnH-GUG · KT220689.1 · 3–76 bp · −
psbA · KT220689.1 · 419–1,477 bp · −
trnK-UUU · KT220689.1 · 1,703–4,293 bp · −
matK · KT220689.1 · 2,018–3,562 bp · −
rps16 · KT220689.1 · 4,830–5,964 bp · −
trnQ-UUG · KT220689.1 · 7,003–7,074 bp · −
trnS-GCU · KT220689.1 · 8,321–8,408 bp · −
atpA · KT220689.1 · 10,218–11,741 bp · −
atpF · KT220689.1 · 11,834–13,082 bp · −
atpH · KT220689.1 · 13,355–13,600 bp · −
atpI · KT220689.1 · 14,632–15,375 bp · −
rps2 · KT220689.1 · 15,605–16,315 bp · −
rpoC2 · KT220689.1 · 16,528–20,724 bp · −
rpoC1 · KT220689.1 · 20,889–23,709 bp · −
rpoB · KT220689.1 · 23,736–26,948 bp · −
psbM · KT220689.1 · 29,492–29,596 bp · −
trnD-GUC · KT220689.1 · 30,124–30,197 bp · −
trnY-GUA · KT220689.1 · 30,308–30,391 bp · −
trnE-UUC · KT220689.1 · 30,459–30,531 bp · −
trnS-UGA · KT220689.1 · 35,145–35,227 bp · −
trnfM-CAU · KT220689.1 · 36,285–36,358 bp · −
rps14 · KT220689.1 · 36,508–36,810 bp · −
psaB · KT220689.1 · 36,932–39,136 bp · −
psaA · KT220689.1 · 39,162–41,414 bp · −
ycf3 · KT220689.1 · 42,058–44,017 bp · −
rps4 · KT220689.1 · 45,171–45,776 bp · −
trnT-UGU · KT220689.1 · 46,230–46,302 bp · −
ndhJ · KT220689.1 · 48,633–49,109 bp · −
ndhK · KT220689.1 · 49,220–49,897 bp · −
ndhC · KT220689.1 · 49,949–50,311 bp · −
trnV-UAC · KT220689.1 · 51,306–51,948 bp · −
atpE · KT220689.1 · 52,416–52,817 bp · −
atpB · KT220689.1 · 52,814–54,310 bp · −
psbJ · KT220689.1 · 64,166–64,288 bp · −
psbL · KT220689.1 · 64,423–64,539 bp · −
psbF · KT220689.1 · 64,563–64,682 bp · −
psbE · KT220689.1 · 64,697–64,948 bp · −
trnW-CCA · KT220689.1 · 66,316–66,389 bp · −
trnP-UGG · KT220689.1 · 66,563–66,636 bp · −
rpl20 · KT220689.1 · 68,427–68,813 bp · −
rps12 · KT220689.1 · 69,632–69,745 bp · −
rps12 · KT220689.1 · 97,021–97,811 bp · −
clpP · KT220689.1 · 69,863–71,780 bp · −
psbN · KT220689.1 · 74,101–74,232 bp · −
rpoA · KT220689.1 · 77,615–78,622 bp · −
rps11 · KT220689.1 · 78,693–79,109 bp · −
rpl36 · KT220689.1 · 79,219–79,332 bp · −
infA · KT220689.1 · 79,436–79,669 bp · −
rps8 · KT220689.1 · 79,801–80,205 bp · −
rpl14 · KT220689.1 · 80,381–80,749 bp · −
rpl16 · KT220689.1 · 80,881–82,156 bp · −
rps3 · KT220689.1 · 82,299–82,961 bp · −
rpl22 · KT220689.1 · 82,946–83,413 bp · −
rps19 · KT220689.1 · 83,478–83,756 bp · −
rpl2 · KT220689.1 · 83,824–85,312 bp · −
rpl23 · KT220689.1 · 85,331–85,612 bp · −
trnI-CAU · KT220689.1 · 85,778–85,851 bp · −
trnL-CAA · KT220689.1 · 93,381–93,461 bp · −
ndhB · KT220689.1 · 94,037–96,181 bp · −
rps7 · KT220689.1 · 96,500–96,967 bp · −
trnN-GUU · KT220689.1 · 107,915–107,986 bp · −
ndhF · KT220689.1 · 109,340–111,571 bp · −
ndhD · KT220689.1 · 114,223–115,752 bp · −
psaC · KT220689.1 · 115,852–116,097 bp · −
ndhE · KT220689.1 · 116,347–116,652 bp · −
ndhG · KT220689.1 · 116,875–117,405 bp · −
ndhI · KT220689.1 · 117,774–118,265 bp · −
ndhA · KT220689.1 · 118,346–120,479 bp · −
ndhH · KT220689.1 · 120,481–121,662 bp · −
rps15 · KT220689.1 · 121,762–122,034 bp · −
ycf1 · KT220689.1 · 122,435–127,984 bp · −
trnR-ACG · KT220689.1 · 128,946–129,019 bp · −
trnA-UGC · KT220689.1 · 132,833–133,723 bp · −
trnI-GAU · KT220689.1 · 133,788–134,808 bp · −
trnV-GAC · KT220689.1 · 136,824–136,895 bp · −
ycf15 · KT220689.1 · 143,182–143,430 bp · −
ycf2 · KT220689.1 · 143,521–150,360 bp · −
psbK · KT220689.1 · 7,472–7,657 bp · +
psbI · KT220689.1 · 7,972–8,100 bp · +
trnG-UCC · KT220689.1 · 9,101–9,849 bp · +
trnR-UCU · KT220689.1 · 10,042–10,113 bp · +
trnC-GCA · KT220689.1 · 28,133–28,203 bp · +
petN · KT220689.1 · 28,365–28,460 bp · +
trnT-GGU · KT220689.1 · 31,087–31,158 bp · +
psbD · KT220689.1 · 32,468–33,529 bp · +
psbC · KT220689.1 · 33,477–34,898 bp · +
psbZ · KT220689.1 · 35,575–35,763 bp · +
trnG-GCC · KT220689.1 · 36,040–36,110 bp · +
trnS-GGA · KT220689.1 · 44,864–44,950 bp · +
trnL-UAA · KT220689.1 · 46,997–47,573 bp · +
trnF-GAA · KT220689.1 · 47,874–47,946 bp · +
trnM-CAU · KT220689.1 · 52,129–52,201 bp · +
rbcL · KT220689.1 · 55,113–56,573 bp · +
accD · KT220689.1 · 57,264–58,745 bp · +
psaI · KT220689.1 · 59,473–59,583 bp · +
ycf4 · KT220689.1 · 60,029–60,583 bp · +
cemA · KT220689.1 · 61,243–61,932 bp · +
petA · KT220689.1 · 62,160–63,122 bp · +
petL · KT220689.1 · 65,805–65,900 bp · +
petG · KT220689.1 · 66,076–66,189 bp · +
psaJ · KT220689.1 · 66,923–67,057 bp · +
rpl33 · KT220689.1 · 67,507–67,707 bp · +
rps18 · KT220689.1 · 67,892–68,197 bp · +
rps12 · KT220689.1 · 138,489–139,279 bp · +
psbB · KT220689.1 · 72,238–73,764 bp · +
psbT · KT220689.1 · 73,937–74,038 bp · +
psbH · KT220689.1 · 74,320–74,559 bp · +
petB · KT220689.1 · 74,686–76,050 bp · +
petD · KT220689.1 · 76,239–77,438 bp · +
ycf2 · KT220689.1 · 85,940–92,779 bp · +
ycf15 · KT220689.1 · 92,870–93,118 bp · +
trnV-GAC · KT220689.1 · 99,405–99,476 bp · +
trnI-GAU · KT220689.1 · 101,492–102,514 bp · +
trnA-UGC · KT220689.1 · 102,577–103,467 bp · +
trnR-ACG · KT220689.1 · 107,281–107,354 bp · +
ycf1 · KT220689.1 · 108,316–109,386 bp · +
rpl32 · KT220689.1 · 111,990–112,160 bp · +
trnL-UAG · KT220689.1 · 112,834–112,913 bp · +
ccsA · KT220689.1 · 113,006–113,977 bp · +
trnN-GUU · KT220689.1 · 128,314–128,385 bp · +
rps7 · KT220689.1 · 139,333–139,800 bp · +
ndhB · KT220689.1 · 140,119–142,263 bp · +
trnL-CAA · KT220689.1 · 142,839–142,919 bp · +
trnI-CAU · KT220689.1 · 150,449–150,522 bp · +
rpl23 · KT220689.1 · 150,688–150,969 bp · +
rpl2 · KT220689.1 · 150,988–152,476 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Perilla frutescens var. frutescens
ANNOTATED PLASTOME
KT220689.1
152,598 bp · 125 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
0 38150 76299 114448 152598 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC trnI-GAU trnA-UGC trnR-ACG ycf1 rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG trnA-UGC trnI-GAU trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
126 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 3 76 74 Locate
psbA gene − 419 1477 1059 Locate
trnK-UUU gene − 1703 4293 2591 Locate
matK gene − 2018 3562 1545 Locate
rps16 gene − 4830 5964 1135 Locate
trnQ-UUG gene − 7003 7074 72 Locate
psbK gene + 7472 7657 186 Locate
psbI gene + 7972 8100 129 Locate
trnS-GCU gene − 8321 8408 88 Locate
trnG-UCC gene + 9101 9849 749 Locate
trnR-UCU gene + 10042 10113 72 Locate
atpA gene − 10218 11741 1524 Locate
atpF gene − 11834 13082 1249 Locate
atpH gene − 13355 13600 246 Locate
atpI gene − 14632 15375 744 Locate
rps2 gene − 15605 16315 711 Locate
rpoC2 gene − 16528 20724 4197 Locate
rpoC1 gene − 20889 23709 2821 Locate
rpoB gene − 23736 26948 3213 Locate
trnC-GCA gene + 28133 28203 71 Locate
petN gene + 28365 28460 96 Locate
psbM gene − 29492 29596 105 Locate
trnD-GUC gene − 30124 30197 74 Locate
trnY-GUA gene − 30308 30391 84 Locate
trnE-UUC gene − 30459 30531 73 Locate
trnT-GGU gene + 31087 31158 72 Locate
psbD gene + 32468 33529 1062 Locate
psbC gene + 33477 34898 1422 Locate
trnS-UGA gene − 35145 35227 83 Locate
psbZ gene + 35575 35763 189 Locate
trnG-GCC gene + 36040 36110 71 Locate
trnfM-CAU gene − 36285 36358 74 Locate
rps14 gene − 36508 36810 303 Locate
psaB gene − 36932 39136 2205 Locate
psaA gene − 39162 41414 2253 Locate
ycf3 gene − 42058 44017 1960 Locate
trnS-GGA gene + 44864 44950 87 Locate
rps4 gene − 45171 45776 606 Locate
trnT-UGU gene − 46230 46302 73 Locate
trnL-UAA gene + 46997 47573 577 Locate
trnF-GAA gene + 47874 47946 73 Locate
ndhJ gene − 48633 49109 477 Locate
ndhK gene − 49220 49897 678 Locate
ndhC gene − 49949 50311 363 Locate
trnV-UAC gene − 51306 51948 643 Locate
trnM-CAU gene + 52129 52201 73 Locate
atpE gene − 52416 52817 402 Locate
atpB gene − 52814 54310 1497 Locate
rbcL gene + 55113 56573 1461 Locate
accD gene + 57264 58745 1482 Locate
psaI gene + 59473 59583 111 Locate
ycf4 gene + 60029 60583 555 Locate
cemA gene + 61243 61932 690 Locate
petA gene + 62160 63122 963 Locate
psbJ gene − 64166 64288 123 Locate
psbL gene − 64423 64539 117 Locate
psbF gene − 64563 64682 120 Locate
psbE gene − 64697 64948 252 Locate
petL gene + 65805 65900 96 Locate
petG gene + 66076 66189 114 Locate
trnW-CCA gene − 66316 66389 74 Locate
trnP-UGG gene − 66563 66636 74 Locate
psaJ gene + 66923 67057 135 Locate
rpl33 gene + 67507 67707 201 Locate
rps18 gene + 67892 68197 306 Locate
rpl20 gene − 68427 68813 387 Locate
rps12 gene − 69632 69745 114 Locate
clpP gene − 69863 71780 1918 Locate
psbB gene + 72238 73764 1527 Locate
psbT gene + 73937 74038 102 Locate
psbN gene − 74101 74232 132 Locate
psbH gene + 74320 74559 240 Locate
petB gene + 74686 76050 1365 Locate
petD gene + 76239 77438 1200 Locate
rpoA gene − 77615 78622 1008 Locate
rps11 gene − 78693 79109 417 Locate
rpl36 gene − 79219 79332 114 Locate
infA gene − 79436 79669 234 Locate
rps8 gene − 79801 80205 405 Locate
rpl14 gene − 80381 80749 369 Locate
rpl16 gene − 80881 82156 1276 Locate
rps3 gene − 82299 82961 663 Locate
rpl22 gene − 82946 83413 468 Locate
rps19 gene − 83478 83756 279 Locate
rpl2 gene − 83824 85312 1489 Locate
rpl23 gene − 85331 85612 282 Locate
trnI-CAU gene − 85778 85851 74 Locate
ycf2 gene + 85940 92779 6840 Locate
ycf15 gene + 92870 93118 249 Locate
trnL-CAA gene − 93381 93461 81 Locate
ndhB gene − 94037 96181 2145 Locate
rps7 gene − 96500 96967 468 Locate
rps12 gene − 97021 97811 791 Locate
trnV-GAC gene + 99405 99476 72 Locate
trnI-GAU gene + 101492 102514 1023 Locate
trnA-UGC gene + 102577 103467 891 Locate
trnR-ACG gene + 107281 107354 74 Locate
trnN-GUU gene − 107915 107986 72 Locate
ycf1 gene + 108316 109386 1071 Locate
ndhF gene − 109340 111571 2232 Locate
rpl32 gene + 111990 112160 171 Locate
trnL-UAG gene + 112834 112913 80 Locate
ccsA gene + 113006 113977 972 Locate
ndhD gene − 114223 115752 1530 Locate
psaC gene − 115852 116097 246 Locate
ndhE gene − 116347 116652 306 Locate
ndhG gene − 116875 117405 531 Locate
ndhI gene − 117774 118265 492 Locate
ndhA gene − 118346 120479 2134 Locate
ndhH gene − 120481 121662 1182 Locate
rps15 gene − 121762 122034 273 Locate
ycf1 gene − 122435 127984 5550 Locate
trnN-GUU gene + 128314 128385 72 Locate
trnR-ACG gene − 128946 129019 74 Locate
trnA-UGC gene − 132833 133723 891 Locate
trnI-GAU gene − 133788 134808 1021 Locate
trnV-GAC gene − 136824 136895 72 Locate
rps12 gene + 138489 139279 791 Locate
rps7 gene + 139333 139800 468 Locate
ndhB gene + 140119 142263 2145 Locate
trnL-CAA gene + 142839 142919 81 Locate
ycf15 gene − 143182 143430 249 Locate
ycf2 gene − 143521 150360 6840 Locate
trnI-CAU gene + 150449 150522 74 Locate
rpl23 gene + 150688 150969 282 Locate
rpl2 gene + 150988 152476 1489 Locate
Status Available
Accession KT220689.1
Length 152,598 bp
GC content 37.8%
Annotated genes 125
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 15 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12
SSR 0
Direct 0
Inverted 0
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources