Perilla frutescens var. hirtella chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
trnH-GUG · NC_030757.1 · 3–76 bp · −
psbA · NC_030757.1 · 419–1,477 bp · −
trnK-UUU · NC_030757.1 · 1,703–4,320 bp · −
matK · NC_030757.1 · 2,045–3,589 bp · −
rps16 · NC_030757.1 · 4,859–5,995 bp · −
trnQ-UUG · NC_030757.1 · 7,032–7,103 bp · −
trnS-GCU · NC_030757.1 · 8,347–8,434 bp · −
atpA · NC_030757.1 · 10,244–11,767 bp · −
atpF · NC_030757.1 · 11,860–13,109 bp · −
atpH · NC_030757.1 · 13,384–13,629 bp · −
atpI · NC_030757.1 · 14,662–15,405 bp · −
rps2 · NC_030757.1 · 15,635–16,345 bp · −
rpoC2 · NC_030757.1 · 16,558–20,754 bp · −
rpoC1 · NC_030757.1 · 20,919–23,739 bp · −
rpoB · NC_030757.1 · 23,766–26,978 bp · −
psbM · NC_030757.1 · 29,522–29,626 bp · −
trnD-GUC · NC_030757.1 · 30,153–30,226 bp · −
trnY-GUA · NC_030757.1 · 30,337–30,420 bp · −
trnE-UUC · NC_030757.1 · 30,488–30,560 bp · −
trnS-UGA · NC_030757.1 · 35,172–35,254 bp · −
trnfM-CAU · NC_030757.1 · 36,311–36,384 bp · −
rps14 · NC_030757.1 · 36,534–36,836 bp · −
psaB · NC_030757.1 · 36,958–39,162 bp · −
psaA · NC_030757.1 · 39,188–41,440 bp · −
ycf3 · NC_030757.1 · 42,095–44,055 bp · −
rps4 · NC_030757.1 · 45,208–45,813 bp · −
trnT-UGU · NC_030757.1 · 46,279–46,351 bp · −
ndhJ · NC_030757.1 · 48,681–49,157 bp · −
ndhK · NC_030757.1 · 49,268–49,945 bp · −
ndhC · NC_030757.1 · 49,997–50,359 bp · −
trnV-UAC · NC_030757.1 · 51,353–51,995 bp · −
atpE · NC_030757.1 · 52,463–52,864 bp · −
atpB · NC_030757.1 · 52,861–54,357 bp · −
psbJ · NC_030757.1 · 64,213–64,335 bp · −
psbL · NC_030757.1 · 64,470–64,586 bp · −
psbF · NC_030757.1 · 64,610–64,729 bp · −
psbE · NC_030757.1 · 64,744–64,995 bp · −
trnW-CCA · NC_030757.1 · 66,364–66,437 bp · −
trnP-UGG · NC_030757.1 · 66,611–66,684 bp · −
rpl20 · NC_030757.1 · 68,475–68,861 bp · −
rps12 · NC_030757.1 · 69,681–69,794 bp · −
rps12 · NC_030757.1 · 97,077–97,867 bp · −
clpP · NC_030757.1 · 69,912–71,832 bp · −
psbN · NC_030757.1 · 74,154–74,285 bp · −
rpoA · NC_030757.1 · 77,675–78,682 bp · −
rps11 · NC_030757.1 · 78,753–79,169 bp · −
rpl36 · NC_030757.1 · 79,279–79,392 bp · −
infA · NC_030757.1 · 79,496–79,729 bp · −
rps8 · NC_030757.1 · 79,860–80,264 bp · −
rpl14 · NC_030757.1 · 80,437–80,805 bp · −
rpl16 · NC_030757.1 · 80,937–82,212 bp · −
rps3 · NC_030757.1 · 82,355–83,017 bp · −
rpl22 · NC_030757.1 · 83,002–83,469 bp · −
rps19 · NC_030757.1 · 83,534–83,812 bp · −
rpl2 · NC_030757.1 · 83,880–85,368 bp · −
rpl23 · NC_030757.1 · 85,387–85,668 bp · −
trnI-CAU · NC_030757.1 · 85,834–85,907 bp · −
trnL-CAA · NC_030757.1 · 93,437–93,517 bp · −
ndhB · NC_030757.1 · 94,093–96,237 bp · −
rps7 · NC_030757.1 · 96,556–97,023 bp · −
trnN-GUU · NC_030757.1 · 107,971–108,042 bp · −
ndhF · NC_030757.1 · 109,396–111,627 bp · −
ndhD · NC_030757.1 · 114,278–115,807 bp · −
psaC · NC_030757.1 · 115,907–116,152 bp · −
ndhE · NC_030757.1 · 116,402–116,707 bp · −
ndhG · NC_030757.1 · 116,930–117,460 bp · −
ndhI · NC_030757.1 · 117,830–118,321 bp · −
ndhA · NC_030757.1 · 118,402–120,537 bp · −
ndhH · NC_030757.1 · 120,539–121,720 bp · −
rps15 · NC_030757.1 · 121,820–122,092 bp · −
ycf1 · NC_030757.1 · 122,493–128,042 bp · −
trnR-ACG · NC_030757.1 · 129,004–129,077 bp · −
BFS54_pgr004 · NC_030757.1 · 129,311–129,441 bp · −
BFS54_pgr003 · NC_030757.1 · 129,702–129,804 bp · −
BFS54_pgr002 · NC_030757.1 · 129,904–132,720 bp · −
trnA-UGC · NC_030757.1 · 132,891–133,781 bp · −
trnI-GAU · NC_030757.1 · 133,846–134,866 bp · −
BFS54_pgr001 · NC_030757.1 · 135,165–136,655 bp · −
trnV-GAC · NC_030757.1 · 136,882–136,953 bp · −
ycf15 · NC_030757.1 · 143,240–143,488 bp · −
ycf2 · NC_030757.1 · 143,579–150,418 bp · −
psbK · NC_030757.1 · 7,501–7,686 bp · +
psbI · NC_030757.1 · 8,001–8,129 bp · +
trnG-UCC · NC_030757.1 · 9,127–9,875 bp · +
trnR-UCU · NC_030757.1 · 10,068–10,139 bp · +
trnC-GCA · NC_030757.1 · 28,163–28,233 bp · +
petN · NC_030757.1 · 28,395–28,490 bp · +
trnT-GGU · NC_030757.1 · 31,117–31,188 bp · +
psbD · NC_030757.1 · 32,495–33,556 bp · +
psbC · NC_030757.1 · 33,504–34,925 bp · +
psbZ · NC_030757.1 · 35,602–35,790 bp · +
trnG-GCC · NC_030757.1 · 36,067–36,137 bp · +
trnS-GGA · NC_030757.1 · 44,902–44,988 bp · +
trnL-UAA · NC_030757.1 · 47,046–47,621 bp · +
trnF-GAA · NC_030757.1 · 47,922–47,994 bp · +
trnM-CAU · NC_030757.1 · 52,176–52,248 bp · +
rbcL · NC_030757.1 · 55,160–56,620 bp · +
accD · NC_030757.1 · 57,311–58,792 bp · +
psaI · NC_030757.1 · 59,520–59,630 bp · +
ycf4 · NC_030757.1 · 60,076–60,630 bp · +
cemA · NC_030757.1 · 61,290–61,979 bp · +
petA · NC_030757.1 · 62,207–63,169 bp · +
petL · NC_030757.1 · 65,852–65,947 bp · +
petG · NC_030757.1 · 66,123–66,236 bp · +
psaJ · NC_030757.1 · 66,971–67,105 bp · +
rpl33 · NC_030757.1 · 67,555–67,755 bp · +
rps18 · NC_030757.1 · 67,940–68,245 bp · +
rps12 · NC_030757.1 · 138,547–139,337 bp · +
psbB · NC_030757.1 · 72,290–73,816 bp · +
psbT · NC_030757.1 · 73,990–74,091 bp · +
psbH · NC_030757.1 · 74,373–74,612 bp · +
petB · NC_030757.1 · 74,739–76,110 bp · +
petD · NC_030757.1 · 76,299–77,498 bp · +
ycf2 · NC_030757.1 · 85,996–92,835 bp · +
ycf15 · NC_030757.1 · 92,926–93,174 bp · +
trnV-GAC · NC_030757.1 · 99,461–99,532 bp · +
BFS54_pgr008 · NC_030757.1 · 99,759–101,249 bp · +
trnI-GAU · NC_030757.1 · 101,548–102,570 bp · +
trnA-UGC · NC_030757.1 · 102,633–103,523 bp · +
BFS54_pgr007 · NC_030757.1 · 103,694–106,510 bp · +
BFS54_pgr006 · NC_030757.1 · 106,610–106,712 bp · +
BFS54_pgr005 · NC_030757.1 · 106,973–107,103 bp · +
trnR-ACG · NC_030757.1 · 107,337–107,410 bp · +
ycf1 · NC_030757.1 · 108,372–109,442 bp · +
rpl32 · NC_030757.1 · 112,046–112,216 bp · +
trnL-UAG · NC_030757.1 · 112,890–112,969 bp · +
ccsA · NC_030757.1 · 113,062–114,033 bp · +
trnN-GUU · NC_030757.1 · 128,372–128,443 bp · +
rps7 · NC_030757.1 · 139,391–139,858 bp · +
ndhB · NC_030757.1 · 140,177–142,321 bp · +
trnL-CAA · NC_030757.1 · 142,897–142,977 bp · +
trnI-CAU · NC_030757.1 · 150,507–150,580 bp · +
rpl23 · NC_030757.1 · 150,746–151,027 bp · +
rpl2 · NC_030757.1 · 151,046–152,534 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Perilla frutescens var. hirtella
ANNOTATED PLASTOME
NC_030757.1
152,656 bp · 133 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
0 38164 76328 114492 152656 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC BFS54_pgr008 trnI-GAU trnA-UGC BFS54_pgr007 BFS54_pgr006 BFS54_pgr005 trnR-ACG ycf1 rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG BFS54_pgr004 BFS54_pgr003 BFS54_pgr002 trnA-UGC trnI-GAU BFS54_pgr001 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
134 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 3 76 74 Locate
psbA gene − 419 1477 1059 Locate
trnK-UUU gene − 1703 4320 2618 Locate
matK gene − 2045 3589 1545 Locate
rps16 gene − 4859 5995 1137 Locate
trnQ-UUG gene − 7032 7103 72 Locate
psbK gene + 7501 7686 186 Locate
psbI gene + 8001 8129 129 Locate
trnS-GCU gene − 8347 8434 88 Locate
trnG-UCC gene + 9127 9875 749 Locate
trnR-UCU gene + 10068 10139 72 Locate
atpA gene − 10244 11767 1524 Locate
atpF gene − 11860 13109 1250 Locate
atpH gene − 13384 13629 246 Locate
atpI gene − 14662 15405 744 Locate
rps2 gene − 15635 16345 711 Locate
rpoC2 gene − 16558 20754 4197 Locate
rpoC1 gene − 20919 23739 2821 Locate
rpoB gene − 23766 26978 3213 Locate
trnC-GCA gene + 28163 28233 71 Locate
petN gene + 28395 28490 96 Locate
psbM gene − 29522 29626 105 Locate
trnD-GUC gene − 30153 30226 74 Locate
trnY-GUA gene − 30337 30420 84 Locate
trnE-UUC gene − 30488 30560 73 Locate
trnT-GGU gene + 31117 31188 72 Locate
psbD gene + 32495 33556 1062 Locate
psbC gene + 33504 34925 1422 Locate
trnS-UGA gene − 35172 35254 83 Locate
psbZ gene + 35602 35790 189 Locate
trnG-GCC gene + 36067 36137 71 Locate
trnfM-CAU gene − 36311 36384 74 Locate
rps14 gene − 36534 36836 303 Locate
psaB gene − 36958 39162 2205 Locate
psaA gene − 39188 41440 2253 Locate
ycf3 gene − 42095 44055 1961 Locate
trnS-GGA gene + 44902 44988 87 Locate
rps4 gene − 45208 45813 606 Locate
trnT-UGU gene − 46279 46351 73 Locate
trnL-UAA gene + 47046 47621 576 Locate
trnF-GAA gene + 47922 47994 73 Locate
ndhJ gene − 48681 49157 477 Locate
ndhK gene − 49268 49945 678 Locate
ndhC gene − 49997 50359 363 Locate
trnV-UAC gene − 51353 51995 643 Locate
trnM-CAU gene + 52176 52248 73 Locate
atpE gene − 52463 52864 402 Locate
atpB gene − 52861 54357 1497 Locate
rbcL gene + 55160 56620 1461 Locate
accD gene + 57311 58792 1482 Locate
psaI gene + 59520 59630 111 Locate
ycf4 gene + 60076 60630 555 Locate
cemA gene + 61290 61979 690 Locate
petA gene + 62207 63169 963 Locate
psbJ gene − 64213 64335 123 Locate
psbL gene − 64470 64586 117 Locate
psbF gene − 64610 64729 120 Locate
psbE gene − 64744 64995 252 Locate
petL gene + 65852 65947 96 Locate
petG gene + 66123 66236 114 Locate
trnW-CCA gene − 66364 66437 74 Locate
trnP-UGG gene − 66611 66684 74 Locate
psaJ gene + 66971 67105 135 Locate
rpl33 gene + 67555 67755 201 Locate
rps18 gene + 67940 68245 306 Locate
rpl20 gene − 68475 68861 387 Locate
rps12 gene − 69681 69794 114 Locate
clpP gene − 69912 71832 1921 Locate
psbB gene + 72290 73816 1527 Locate
psbT gene + 73990 74091 102 Locate
psbN gene − 74154 74285 132 Locate
psbH gene + 74373 74612 240 Locate
petB gene + 74739 76110 1372 Locate
petD gene + 76299 77498 1200 Locate
rpoA gene − 77675 78682 1008 Locate
rps11 gene − 78753 79169 417 Locate
rpl36 gene − 79279 79392 114 Locate
infA gene − 79496 79729 234 Locate
rps8 gene − 79860 80264 405 Locate
rpl14 gene − 80437 80805 369 Locate
rpl16 gene − 80937 82212 1276 Locate
rps3 gene − 82355 83017 663 Locate
rpl22 gene − 83002 83469 468 Locate
rps19 gene − 83534 83812 279 Locate
rpl2 gene − 83880 85368 1489 Locate
rpl23 gene − 85387 85668 282 Locate
trnI-CAU gene − 85834 85907 74 Locate
ycf2 gene + 85996 92835 6840 Locate
ycf15 gene + 92926 93174 249 Locate
trnL-CAA gene − 93437 93517 81 Locate
ndhB gene − 94093 96237 2145 Locate
rps7 gene − 96556 97023 468 Locate
rps12 gene − 97077 97867 791 Locate
trnV-GAC gene + 99461 99532 72 Locate
BFS54_pgr008 gene + 99759 101249 1491 Locate
trnI-GAU gene + 101548 102570 1023 Locate
trnA-UGC gene + 102633 103523 891 Locate
BFS54_pgr007 gene + 103694 106510 2817 Locate
BFS54_pgr006 gene + 106610 106712 103 Locate
BFS54_pgr005 gene + 106973 107103 131 Locate
trnR-ACG gene + 107337 107410 74 Locate
trnN-GUU gene − 107971 108042 72 Locate
ycf1 gene + 108372 109442 1071 Locate
ndhF gene − 109396 111627 2232 Locate
rpl32 gene + 112046 112216 171 Locate
trnL-UAG gene + 112890 112969 80 Locate
ccsA gene + 113062 114033 972 Locate
ndhD gene − 114278 115807 1530 Locate
psaC gene − 115907 116152 246 Locate
ndhE gene − 116402 116707 306 Locate
ndhG gene − 116930 117460 531 Locate
ndhI gene − 117830 118321 492 Locate
ndhA gene − 118402 120537 2136 Locate
ndhH gene − 120539 121720 1182 Locate
rps15 gene − 121820 122092 273 Locate
ycf1 gene − 122493 128042 5550 Locate
trnN-GUU gene + 128372 128443 72 Locate
trnR-ACG gene − 129004 129077 74 Locate
BFS54_pgr004 gene − 129311 129441 131 Locate
BFS54_pgr003 gene − 129702 129804 103 Locate
BFS54_pgr002 gene − 129904 132720 2817 Locate
trnA-UGC gene − 132891 133781 891 Locate
trnI-GAU gene − 133846 134866 1021 Locate
BFS54_pgr001 gene − 135165 136655 1491 Locate
trnV-GAC gene − 136882 136953 72 Locate
rps12 gene + 138547 139337 791 Locate
rps7 gene + 139391 139858 468 Locate
ndhB gene + 140177 142321 2145 Locate
trnL-CAA gene + 142897 142977 81 Locate
ycf15 gene − 143240 143488 249 Locate
ycf2 gene − 143579 150418 6840 Locate
trnI-CAU gene + 150507 150580 74 Locate
rpl23 gene + 150746 151027 282 Locate
rpl2 gene + 151046 152534 1489 Locate
Status Available
Accession NC_030757.1
Length 152,656 bp
GC content 37.8%
Annotated genes 133
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 23 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12
SSR 0
Direct 0
Inverted 0
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources