Phlomoides betonicoides chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
trnH-GUG · OP186467.1 · 2–76 bp · −
psbA · OP186467.1 · 278–1,336 bp · −
trnK-UUU · OP186467.1 · 1,569–4,164 bp · −
matK · OP186467.1 · 1,873–3,414 bp · −
rps16 · OP186467.1 · 5,103–6,242 bp · −
trnQ-UUG · OP186467.1 · 7,239–7,310 bp · −
trnS-GCU · OP186467.1 · 8,441–8,528 bp · −
atpA · OP186467.1 · 10,193–11,716 bp · −
atpF · OP186467.1 · 11,805–13,015 bp · −
atpH · OP186467.1 · 13,385–13,630 bp · −
atpI · OP186467.1 · 14,624–15,367 bp · −
rps2 · OP186467.1 · 15,598–16,308 bp · −
rpoC2 · OP186467.1 · 16,544–20,734 bp · −
rpoC1 · OP186467.1 · 20,889–23,747 bp · −
rpoB · OP186467.1 · 23,753–26,965 bp · −
psbM · OP186467.1 · 29,856–29,960 bp · −
trnD-GUC · OP186467.1 · 30,499–30,572 bp · −
trnY-GUA · OP186467.1 · 30,686–30,769 bp · −
trnE-UUC · OP186467.1 · 30,829–30,898 bp · −
trnT-GGU · OP186467.1 · 31,494–31,566 bp · −
trnS-UGA · OP186467.1 · 35,474–35,566 bp · −
trnfM-CAU · OP186467.1 · 36,533–36,606 bp · −
rps14 · OP186467.1 · 36,756–37,058 bp · −
psaB · OP186467.1 · 37,186–39,390 bp · −
psaA · OP186467.1 · 39,416–41,668 bp · −
ycf3 · OP186467.1 · 42,394–44,327 bp · −
rps4 · OP186467.1 · 45,014–45,619 bp · −
trnT-UGU · OP186467.1 · 46,014–46,086 bp · −
ndhJ · OP186467.1 · 48,364–48,840 bp · −
ndhK · OP186467.1 · 48,941–49,618 bp · −
ndhC · OP186467.1 · 49,672–50,034 bp · −
trnV-UAC · OP186467.1 · 50,988–51,640 bp · −
atpE · OP186467.1 · 52,124–52,525 bp · −
atpB · OP186467.1 · 52,522–54,018 bp · −
psbJ · OP186467.1 · 63,667–63,789 bp · −
psbL · OP186467.1 · 63,927–64,043 bp · −
psbF · OP186467.1 · 64,067–64,186 bp · −
psbE · OP186467.1 · 64,201–64,452 bp · −
trnW-CCA · OP186467.1 · 65,887–65,960 bp · −
trnP-UGG · OP186467.1 · 66,124–66,197 bp · −
rpl20 · OP186467.1 · 67,955–68,341 bp · −
rps12 · OP186467.1 · 69,101–69,214 bp · −
rps12 · OP186467.1 · 96,424–97,217 bp · −
clpP · OP186467.1 · 69,341–71,213 bp · −
psbN · OP186467.1 · 73,546–73,677 bp · −
rpoA · OP186467.1 · 77,086–78,099 bp · −
rps11 · OP186467.1 · 78,171–78,587 bp · −
rpl36 · OP186467.1 · 78,690–78,803 bp · −
infA · OP186467.1 · 78,899–79,132 bp · −
rps8 · OP186467.1 · 79,255–79,668 bp · −
rpl14 · OP186467.1 · 79,840–80,208 bp · −
rpl16 · OP186467.1 · 80,335–81,642 bp · −
rps3 · OP186467.1 · 81,798–82,460 bp · −
rpl22 · OP186467.1 · 82,445–82,909 bp · −
rps19 · OP186467.1 · 82,969–83,247 bp · −
rpl2 · OP186467.1 · 83,300–84,791 bp · −
rpl23 · OP186467.1 · 84,810–85,091 bp · −
trnI-CAU · OP186467.1 · 85,257–85,330 bp · −
trnL-CAA · OP186467.1 · 92,792–92,872 bp · −
ndhB · OP186467.1 · 93,417–95,628 bp · −
rps7 · OP186467.1 · 95,903–96,370 bp · −
trnN-GUU · OP186467.1 · 107,317–107,388 bp · −
ndhF · OP186467.1 · 108,778–111,000 bp · −
ndhD · OP186467.1 · 113,534–115,054 bp · −
psaC · OP186467.1 · 115,157–115,402 bp · −
ndhE · OP186467.1 · 115,665–115,970 bp · −
ndhG · OP186467.1 · 116,186–116,716 bp · −
ndhI · OP186467.1 · 117,085–117,591 bp · −
ndhA · OP186467.1 · 117,678–119,843 bp · −
ndhH · OP186467.1 · 119,845–121,026 bp · −
rps15 · OP186467.1 · 121,127–121,399 bp · −
ycf1 · OP186467.1 · 121,782–127,286 bp · −
trnR-ACG · OP186467.1 · 128,257–128,329 bp · −
rrn5 · OP186467.1 · 128,564–128,684 bp · −
rrn4.5 · OP186467.1 · 128,939–129,041 bp · −
rrn23 · OP186467.1 · 129,140–131,950 bp · −
trnA-UGC · OP186467.1 · 132,142–133,020 bp · −
trnI-GAU · OP186467.1 · 133,085–134,089 bp · −
rrn16 · OP186467.1 · 134,378–135,868 bp · −
trnV-GAC · OP186467.1 · 136,096–136,167 bp · −
ycf15 · OP186467.1 · 142,469–142,717 bp · −
ycf2 · OP186467.1 · 142,760–149,581 bp · −
psbK · OP186467.1 · 7,647–7,832 bp · +
psbI · OP186467.1 · 8,208–8,318 bp · +
trnG-UCC · OP186467.1 · 9,089–9,848 bp · +
trnR-UCU · OP186467.1 · 10,022–10,096 bp · +
trnC-GCA · OP186467.1 · 28,067–28,142 bp · +
petN · OP186467.1 · 28,975–29,064 bp · +
psbD · OP186467.1 · 32,813–33,874 bp · +
psbC · OP186467.1 · 33,822–35,243 bp · +
psbZ · OP186467.1 · 35,893–36,081 bp · +
trnG-GCC · OP186467.1 · 36,313–36,383 bp · +
trnS-GGA · OP186467.1 · 44,644–44,730 bp · +
trnL-UAA · OP186467.1 · 46,749–47,321 bp · +
trnF-GAA · OP186467.1 · 47,613–47,685 bp · +
trnM-CAU · OP186467.1 · 51,829–51,901 bp · +
rbcL · OP186467.1 · 54,826–56,271 bp · +
accD · OP186467.1 · 56,961–58,427 bp · +
psaI · OP186467.1 · 59,107–59,217 bp · +
ycf4 · OP186467.1 · 59,650–60,204 bp · +
cemA · OP186467.1 · 60,765–61,454 bp · +
petA · OP186467.1 · 61,671–62,633 bp · +
petL · OP186467.1 · 65,379–65,474 bp · +
petG · OP186467.1 · 65,649–65,762 bp · +
psaJ · OP186467.1 · 66,472–66,606 bp · +
rpl33 · OP186467.1 · 67,079–67,279 bp · +
rps18 · OP186467.1 · 67,431–67,736 bp · +
rps12 · OP186467.1 · 137,783–138,576 bp · +
psbB · OP186467.1 · 71,650–73,176 bp · +
psbT · OP186467.1 · 73,371–73,472 bp · +
psbH · OP186467.1 · 73,781–74,002 bp · +
petB · OP186467.1 · 74,127–75,514 bp · +
petD · OP186467.1 · 75,709–76,923 bp · +
ycf2 · OP186467.1 · 85,419–92,240 bp · +
ycf15 · OP186467.1 · 92,283–92,531 bp · +
trnV-GAC · OP186467.1 · 98,833–98,904 bp · +
rrn16 · OP186467.1 · 99,132–100,622 bp · +
trnI-GAU · OP186467.1 · 100,911–101,915 bp · +
trnA-UGC · OP186467.1 · 101,980–102,858 bp · +
rrn23 · OP186467.1 · 103,050–105,860 bp · +
rrn4.5 · OP186467.1 · 105,959–106,061 bp · +
rrn5 · OP186467.1 · 106,316–106,436 bp · +
trnR-ACG · OP186467.1 · 106,671–106,743 bp · +
ycf1 · OP186467.1 · 107,714–108,832 bp · +
rpl32 · OP186467.1 · 111,512–111,688 bp · +
trnL-UAG · OP186467.1 · 112,218–112,297 bp · +
ccsA · OP186467.1 · 112,382–113,353 bp · +
trnN-GUU · OP186467.1 · 127,612–127,683 bp · +
rps7 · OP186467.1 · 138,630–139,097 bp · +
ndhB · OP186467.1 · 139,372–141,583 bp · +
trnL-CAA · OP186467.1 · 142,128–142,208 bp · +
trnI-CAU · OP186467.1 · 149,670–149,743 bp · +
rpl23 · OP186467.1 · 149,909–150,190 bp · +
rpl2 · OP186467.1 · 150,209–151,700 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Phlomoides betonicoides
ANNOTATED PLASTOME
OP186467.1
151,794 bp · 133 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37948 75897 113846 151794 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG ycf1 rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnT-GGU trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
134 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 2 76 75 Locate
psbA gene − 278 1336 1059 Locate
trnK-UUU gene − 1569 4164 2596 Locate
matK gene − 1873 3414 1542 Locate
rps16 gene − 5103 6242 1140 Locate
trnQ-UUG gene − 7239 7310 72 Locate
psbK gene + 7647 7832 186 Locate
psbI gene + 8208 8318 111 Locate
trnS-GCU gene − 8441 8528 88 Locate
trnG-UCC gene + 9089 9848 760 Locate
trnR-UCU gene + 10022 10096 75 Locate
atpA gene − 10193 11716 1524 Locate
atpF gene − 11805 13015 1211 Locate
atpH gene − 13385 13630 246 Locate
atpI gene − 14624 15367 744 Locate
rps2 gene − 15598 16308 711 Locate
rpoC2 gene − 16544 20734 4191 Locate
rpoC1 gene − 20889 23747 2859 Locate
rpoB gene − 23753 26965 3213 Locate
trnC-GCA gene + 28067 28142 76 Locate
petN gene + 28975 29064 90 Locate
psbM gene − 29856 29960 105 Locate
trnD-GUC gene − 30499 30572 74 Locate
trnY-GUA gene − 30686 30769 84 Locate
trnE-UUC gene − 30829 30898 70 Locate
trnT-GGU gene − 31494 31566 73 Locate
psbD gene + 32813 33874 1062 Locate
psbC gene + 33822 35243 1422 Locate
trnS-UGA gene − 35474 35566 93 Locate
psbZ gene + 35893 36081 189 Locate
trnG-GCC gene + 36313 36383 71 Locate
trnfM-CAU gene − 36533 36606 74 Locate
rps14 gene − 36756 37058 303 Locate
psaB gene − 37186 39390 2205 Locate
psaA gene − 39416 41668 2253 Locate
ycf3 gene − 42394 44327 1934 Locate
trnS-GGA gene + 44644 44730 87 Locate
rps4 gene − 45014 45619 606 Locate
trnT-UGU gene − 46014 46086 73 Locate
trnL-UAA gene + 46749 47321 573 Locate
trnF-GAA gene + 47613 47685 73 Locate
ndhJ gene − 48364 48840 477 Locate
ndhK gene − 48941 49618 678 Locate
ndhC gene − 49672 50034 363 Locate
trnV-UAC gene − 50988 51640 653 Locate
trnM-CAU gene + 51829 51901 73 Locate
atpE gene − 52124 52525 402 Locate
atpB gene − 52522 54018 1497 Locate
rbcL gene + 54826 56271 1446 Locate
accD gene + 56961 58427 1467 Locate
psaI gene + 59107 59217 111 Locate
ycf4 gene + 59650 60204 555 Locate
cemA gene + 60765 61454 690 Locate
petA gene + 61671 62633 963 Locate
psbJ gene − 63667 63789 123 Locate
psbL gene − 63927 64043 117 Locate
psbF gene − 64067 64186 120 Locate
psbE gene − 64201 64452 252 Locate
petL gene + 65379 65474 96 Locate
petG gene + 65649 65762 114 Locate
trnW-CCA gene − 65887 65960 74 Locate
trnP-UGG gene − 66124 66197 74 Locate
psaJ gene + 66472 66606 135 Locate
rpl33 gene + 67079 67279 201 Locate
rps18 gene + 67431 67736 306 Locate
rpl20 gene − 67955 68341 387 Locate
rps12 gene − 69101 69214 114 Locate
clpP gene − 69341 71213 1873 Locate
psbB gene + 71650 73176 1527 Locate
psbT gene + 73371 73472 102 Locate
psbN gene − 73546 73677 132 Locate
psbH gene + 73781 74002 222 Locate
petB gene + 74127 75514 1388 Locate
petD gene + 75709 76923 1215 Locate
rpoA gene − 77086 78099 1014 Locate
rps11 gene − 78171 78587 417 Locate
rpl36 gene − 78690 78803 114 Locate
infA gene − 78899 79132 234 Locate
rps8 gene − 79255 79668 414 Locate
rpl14 gene − 79840 80208 369 Locate
rpl16 gene − 80335 81642 1308 Locate
rps3 gene − 81798 82460 663 Locate
rpl22 gene − 82445 82909 465 Locate
rps19 gene − 82969 83247 279 Locate
rpl2 gene − 83300 84791 1492 Locate
rpl23 gene − 84810 85091 282 Locate
trnI-CAU gene − 85257 85330 74 Locate
ycf2 gene + 85419 92240 6822 Locate
ycf15 gene + 92283 92531 249 Locate
trnL-CAA gene − 92792 92872 81 Locate
ndhB gene − 93417 95628 2212 Locate
rps7 gene − 95903 96370 468 Locate
rps12 gene − 96424 97217 794 Locate
trnV-GAC gene + 98833 98904 72 Locate
rrn16 gene + 99132 100622 1491 Locate
trnI-GAU gene + 100911 101915 1005 Locate
trnA-UGC gene + 101980 102858 879 Locate
rrn23 gene + 103050 105860 2811 Locate
rrn4.5 gene + 105959 106061 103 Locate
rrn5 gene + 106316 106436 121 Locate
trnR-ACG gene + 106671 106743 73 Locate
trnN-GUU gene − 107317 107388 72 Locate
ycf1 gene + 107714 108832 1119 Locate
ndhF gene − 108778 111000 2223 Locate
rpl32 gene + 111512 111688 177 Locate
trnL-UAG gene + 112218 112297 80 Locate
ccsA gene + 112382 113353 972 Locate
ndhD gene − 113534 115054 1521 Locate
psaC gene − 115157 115402 246 Locate
ndhE gene − 115665 115970 306 Locate
ndhG gene − 116186 116716 531 Locate
ndhI gene − 117085 117591 507 Locate
ndhA gene − 117678 119843 2166 Locate
ndhH gene − 119845 121026 1182 Locate
rps15 gene − 121127 121399 273 Locate
ycf1 gene − 121782 127286 5505 Locate
trnN-GUU gene + 127612 127683 72 Locate
trnR-ACG gene − 128257 128329 73 Locate
rrn5 gene − 128564 128684 121 Locate
rrn4.5 gene − 128939 129041 103 Locate
rrn23 gene − 129140 131950 2811 Locate
trnA-UGC gene − 132142 133020 879 Locate
trnI-GAU gene − 133085 134089 1005 Locate
rrn16 gene − 134378 135868 1491 Locate
trnV-GAC gene − 136096 136167 72 Locate
rps12 gene + 137783 138576 794 Locate
rps7 gene + 138630 139097 468 Locate
ndhB gene + 139372 141583 2212 Locate
trnL-CAA gene + 142128 142208 81 Locate
ycf15 gene − 142469 142717 249 Locate
ycf2 gene − 142760 149581 6822 Locate
trnI-CAU gene + 149670 149743 74 Locate
rpl23 gene + 149909 150190 282 Locate
rpl2 gene + 150209 151700 1492 Locate
Status Available
Accession OP186467.1
Length 151,794 bp
GC content 38.5%
Annotated genes 133
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 15 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 0
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources