Phlomoides kirghisorum chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · NC_067634.1 · 2–75 bp · −
psbA · NC_067634.1 · 307–1,365 bp · −
trnK-UUU · NC_067634.1 · 1,598–4,182 bp · −
matK · NC_067634.1 · 1,898–3,433 bp · −
rps16 · NC_067634.1 · 5,115–6,253 bp · −
trnQ-UUG · NC_067634.1 · 7,238–7,309 bp · −
trnS-GCU · NC_067634.1 · 8,433–8,520 bp · −
atpA · NC_067634.1 · 10,191–11,714 bp · −
atpF · NC_067634.1 · 11,804–13,017 bp · −
atpH · NC_067634.1 · 13,378–13,623 bp · −
atpI · NC_067634.1 · 14,611–15,354 bp · −
rps2 · NC_067634.1 · 15,585–16,295 bp · −
rpoC2 · NC_067634.1 · 16,514–20,701 bp · −
rpoC1 · NC_067634.1 · 20,856–23,693 bp · −
rpoB · NC_067634.1 · 23,720–26,932 bp · −
psbM · NC_067634.1 · 29,722–29,826 bp · −
trnD-GUC · NC_067634.1 · 30,364–30,437 bp · −
trnY-GUA · NC_067634.1 · 30,551–30,634 bp · −
trnE-UUC · NC_067634.1 · 30,694–30,766 bp · −
trnS-UGA · NC_067634.1 · 35,320–35,412 bp · −
trnfM-CAU · NC_067634.1 · 36,383–36,456 bp · −
rps14 · NC_067634.1 · 36,605–36,907 bp · −
psaB · NC_067634.1 · 37,035–39,239 bp · −
psaA · NC_067634.1 · 39,265–41,517 bp · −
ycf3 · NC_067634.1 · 42,241–44,175 bp · −
rps4 · NC_067634.1 · 44,861–45,466 bp · −
trnT-UGU · NC_067634.1 · 45,857–45,929 bp · −
ndhJ · NC_067634.1 · 48,194–48,688 bp · −
ndhK · NC_067634.1 · 48,771–49,532 bp · −
ndhC · NC_067634.1 · 49,502–49,864 bp · −
trnV-UAC · NC_067634.1 · 50,817–51,464 bp · −
atpE · NC_067634.1 · 51,948–52,349 bp · −
atpB · NC_067634.1 · 52,346–53,842 bp · −
psbJ · NC_067634.1 · 63,494–63,616 bp · −
psbL · NC_067634.1 · 63,754–63,870 bp · −
psbF · NC_067634.1 · 63,894–64,013 bp · −
psbE · NC_067634.1 · 64,028–64,279 bp · −
trnW-CCA · NC_067634.1 · 65,720–65,793 bp · −
trnP-UGG · NC_067634.1 · 65,956–66,029 bp · −
rpl20 · NC_067634.1 · 67,769–68,155 bp · −
rps12 · NC_067634.1 · 68,916–69,029 bp · −
rps12 · NC_067634.1 · 96,223–97,015 bp · −
clpP · NC_067634.1 · 69,157–71,025 bp · −
psbN · NC_067634.1 · 73,352–73,483 bp · −
rpoA · NC_067634.1 · 76,883–77,896 bp · −
rps11 · NC_067634.1 · 77,968–78,399 bp · −
rpl36 · NC_067634.1 · 78,487–78,600 bp · −
infA · NC_067634.1 · 78,696–78,929 bp · −
rps8 · NC_067634.1 · 79,056–79,469 bp · −
rpl14 · NC_067634.1 · 79,637–80,005 bp · −
rpl16 · NC_067634.1 · 80,131–81,429 bp · −
rps3 · NC_067634.1 · 81,585–82,247 bp · −
rpl22 · NC_067634.1 · 82,232–82,696 bp · −
rps19 · NC_067634.1 · 82,733–83,011 bp · −
rpl2 · NC_067634.1 · 83,064–84,555 bp · −
rpl23 · NC_067634.1 · 84,574–84,855 bp · −
trnI-CAU · NC_067634.1 · 85,021–85,094 bp · −
trnL-CAA · NC_067634.1 · 92,592–92,672 bp · −
ndhB · NC_067634.1 · 93,217–95,374 bp · −
rps7 · NC_067634.1 · 95,702–96,169 bp · −
trnN-GUU · NC_067634.1 · 107,112–107,183 bp · −
ndhF · NC_067634.1 · 108,573–110,795 bp · −
ndhD · NC_067634.1 · 113,314–114,849 bp · −
psaC · NC_067634.1 · 114,939–115,184 bp · −
ndhE · NC_067634.1 · 115,447–115,749 bp · −
ndhG · NC_067634.1 · 115,967–116,497 bp · −
ndhI · NC_067634.1 · 116,863–117,369 bp · −
ndhA · NC_067634.1 · 117,456–119,621 bp · −
ndhH · NC_067634.1 · 119,623–120,834 bp · −
rps15 · NC_067634.1 · 120,905–121,177 bp · −
ycf1 · NC_067634.1 · 121,559–127,024 bp · −
trnR-ACG · NC_067634.1 · 127,994–128,067 bp · −
rrn5 · NC_067634.1 · 128,302–128,422 bp · −
rrn4.5 · NC_067634.1 · 128,678–128,780 bp · −
rrn23 · NC_067634.1 · 128,881–131,689 bp · −
trnA-UGC · NC_067634.1 · 131,881–132,759 bp · −
trnI-GAU · NC_067634.1 · 132,824–133,831 bp · −
rrn16 · NC_067634.1 · 134,121–135,611 bp · −
trnV-GAC · NC_067634.1 · 135,839–135,910 bp · −
ycf2 · NC_067634.1 · 142,493–149,350 bp · −
psbK · NC_067634.1 · 7,646–7,831 bp · +
psbI · NC_067634.1 · 8,206–8,316 bp · +
trnG-UCC · NC_067634.1 · 9,713–9,847 bp · +
trnR-UCU · NC_067634.1 · 10,023–10,094 bp · +
trnC-GCA · NC_067634.1 · 27,938–28,008 bp · +
petN · NC_067634.1 · 28,847–28,936 bp · +
trnT-GGU · NC_067634.1 · 31,347–31,418 bp · +
psbD · NC_067634.1 · 32,659–33,720 bp · +
psbC · NC_067634.1 · 33,668–35,089 bp · +
psbZ · NC_067634.1 · 35,744–35,932 bp · +
trnG-GCC · NC_067634.1 · 36,163–36,233 bp · +
trnS-GGA · NC_067634.1 · 44,490–44,576 bp · +
trnL-UAA · NC_067634.1 · 46,593–47,165 bp · +
trnF-GAA · NC_067634.1 · 47,450–47,522 bp · +
trnM-CAU · NC_067634.1 · 51,653–51,725 bp · +
rbcL · NC_067634.1 · 54,629–56,095 bp · +
accD · NC_067634.1 · 56,791–58,257 bp · +
psaI · NC_067634.1 · 58,938–59,048 bp · +
ycf4 · NC_067634.1 · 59,486–60,040 bp · +
cemA · NC_067634.1 · 60,585–61,289 bp · +
petA · NC_067634.1 · 61,506–62,468 bp · +
petL · NC_067634.1 · 65,212–65,307 bp · +
petG · NC_067634.1 · 65,482–65,595 bp · +
psaJ · NC_067634.1 · 66,305–66,439 bp · +
rpl33 · NC_067634.1 · 66,902–67,102 bp · +
rps18 · NC_067634.1 · 67,248–67,553 bp · +
rps12 · NC_067634.1 · 137,518–138,310 bp · +
psbB · NC_067634.1 · 71,459–72,985 bp · +
psbT · NC_067634.1 · 73,177–73,278 bp · +
psbH · NC_067634.1 · 73,587–73,808 bp · +
petB · NC_067634.1 · 73,933–75,312 bp · +
petD · NC_067634.1 · 75,507–76,720 bp · +
ycf2 · NC_067634.1 · 85,183–92,040 bp · +
trnV-GAC · NC_067634.1 · 98,623–98,694 bp · +
rrn16 · NC_067634.1 · 98,922–100,412 bp · +
trnI-GAU · NC_067634.1 · 100,702–101,709 bp · +
trnA-UGC · NC_067634.1 · 101,774–102,652 bp · +
rrn23 · NC_067634.1 · 102,844–105,652 bp · +
rrn4.5 · NC_067634.1 · 105,753–105,855 bp · +
rrn5 · NC_067634.1 · 106,111–106,231 bp · +
trnR-ACG · NC_067634.1 · 106,466–106,539 bp · +
ycf1 · NC_067634.1 · 107,437–108,627 bp · +
rpl32 · NC_067634.1 · 111,301–111,477 bp · +
trnL-UAG · NC_067634.1 · 111,998–112,077 bp · +
ccsA · NC_067634.1 · 112,162–113,133 bp · +
trnN-GUU · NC_067634.1 · 127,350–127,421 bp · +
rps7 · NC_067634.1 · 138,364–138,831 bp · +
ndhB · NC_067634.1 · 139,159–141,316 bp · +
trnL-CAA · NC_067634.1 · 141,861–141,941 bp · +
trnI-CAU · NC_067634.1 · 149,439–149,512 bp · +
rpl23 · NC_067634.1 · 149,678–149,959 bp · +
rpl2 · NC_067634.1 · 149,978–151,469 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Phlomoides kirghisorum
ANNOTATED PLASTOME
NC_067634.1
151,563 bp · 131 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37891 75782 113672 151563 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG ycf1 rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
132 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 2 75 74 Locate
psbA gene − 307 1365 1059 Locate
trnK-UUU gene − 1598 4182 2585 Locate
matK gene − 1898 3433 1536 Locate
rps16 gene − 5115 6253 1139 Locate
trnQ-UUG gene − 7238 7309 72 Locate
psbK gene + 7646 7831 186 Locate
psbI gene + 8206 8316 111 Locate
trnS-GCU gene − 8433 8520 88 Locate
trnG-UCC gene + 9713 9847 135 Locate
trnR-UCU gene + 10023 10094 72 Locate
atpA gene − 10191 11714 1524 Locate
atpF gene − 11804 13017 1214 Locate
atpH gene − 13378 13623 246 Locate
atpI gene − 14611 15354 744 Locate
rps2 gene − 15585 16295 711 Locate
rpoC2 gene − 16514 20701 4188 Locate
rpoC1 gene − 20856 23693 2838 Locate
rpoB gene − 23720 26932 3213 Locate
trnC-GCA gene + 27938 28008 71 Locate
petN gene + 28847 28936 90 Locate
psbM gene − 29722 29826 105 Locate
trnD-GUC gene − 30364 30437 74 Locate
trnY-GUA gene − 30551 30634 84 Locate
trnE-UUC gene − 30694 30766 73 Locate
trnT-GGU gene + 31347 31418 72 Locate
psbD gene + 32659 33720 1062 Locate
psbC gene + 33668 35089 1422 Locate
trnS-UGA gene − 35320 35412 93 Locate
psbZ gene + 35744 35932 189 Locate
trnG-GCC gene + 36163 36233 71 Locate
trnfM-CAU gene − 36383 36456 74 Locate
rps14 gene − 36605 36907 303 Locate
psaB gene − 37035 39239 2205 Locate
psaA gene − 39265 41517 2253 Locate
ycf3 gene − 42241 44175 1935 Locate
trnS-GGA gene + 44490 44576 87 Locate
rps4 gene − 44861 45466 606 Locate
trnT-UGU gene − 45857 45929 73 Locate
trnL-UAA gene + 46593 47165 573 Locate
trnF-GAA gene + 47450 47522 73 Locate
ndhJ gene − 48194 48688 495 Locate
ndhK gene − 48771 49532 762 Locate
ndhC gene − 49502 49864 363 Locate
trnV-UAC gene − 50817 51464 648 Locate
trnM-CAU gene + 51653 51725 73 Locate
atpE gene − 51948 52349 402 Locate
atpB gene − 52346 53842 1497 Locate
rbcL gene + 54629 56095 1467 Locate
accD gene + 56791 58257 1467 Locate
psaI gene + 58938 59048 111 Locate
ycf4 gene + 59486 60040 555 Locate
cemA gene + 60585 61289 705 Locate
petA gene + 61506 62468 963 Locate
psbJ gene − 63494 63616 123 Locate
psbL gene − 63754 63870 117 Locate
psbF gene − 63894 64013 120 Locate
psbE gene − 64028 64279 252 Locate
petL gene + 65212 65307 96 Locate
petG gene + 65482 65595 114 Locate
trnW-CCA gene − 65720 65793 74 Locate
trnP-UGG gene − 65956 66029 74 Locate
psaJ gene + 66305 66439 135 Locate
rpl33 gene + 66902 67102 201 Locate
rps18 gene + 67248 67553 306 Locate
rpl20 gene − 67769 68155 387 Locate
rps12 gene − 68916 69029 114 Locate
clpP gene − 69157 71025 1869 Locate
psbB gene + 71459 72985 1527 Locate
psbT gene + 73177 73278 102 Locate
psbN gene − 73352 73483 132 Locate
psbH gene + 73587 73808 222 Locate
petB gene + 73933 75312 1380 Locate
petD gene + 75507 76720 1214 Locate
rpoA gene − 76883 77896 1014 Locate
rps11 gene − 77968 78399 432 Locate
rpl36 gene − 78487 78600 114 Locate
infA gene − 78696 78929 234 Locate
rps8 gene − 79056 79469 414 Locate
rpl14 gene − 79637 80005 369 Locate
rpl16 gene − 80131 81429 1299 Locate
rps3 gene − 81585 82247 663 Locate
rpl22 gene − 82232 82696 465 Locate
rps19 gene − 82733 83011 279 Locate
rpl2 gene − 83064 84555 1492 Locate
rpl23 gene − 84574 84855 282 Locate
trnI-CAU gene − 85021 85094 74 Locate
ycf2 gene + 85183 92040 6858 Locate
trnL-CAA gene − 92592 92672 81 Locate
ndhB gene − 93217 95374 2158 Locate
rps7 gene − 95702 96169 468 Locate
rps12 gene − 96223 97015 793 Locate
trnV-GAC gene + 98623 98694 72 Locate
rrn16 gene + 98922 100412 1491 Locate
trnI-GAU gene + 100702 101709 1008 Locate
trnA-UGC gene + 101774 102652 879 Locate
rrn23 gene + 102844 105652 2809 Locate
rrn4.5 gene + 105753 105855 103 Locate
rrn5 gene + 106111 106231 121 Locate
trnR-ACG gene + 106466 106539 74 Locate
trnN-GUU gene − 107112 107183 72 Locate
ycf1 gene + 107437 108627 1191 Locate
ndhF gene − 108573 110795 2223 Locate
rpl32 gene + 111301 111477 177 Locate
trnL-UAG gene + 111998 112077 80 Locate
ccsA gene + 112162 113133 972 Locate
ndhD gene − 113314 114849 1536 Locate
psaC gene − 114939 115184 246 Locate
ndhE gene − 115447 115749 303 Locate
ndhG gene − 115967 116497 531 Locate
ndhI gene − 116863 117369 507 Locate
ndhA gene − 117456 119621 2166 Locate
ndhH gene − 119623 120834 1212 Locate
rps15 gene − 120905 121177 273 Locate
ycf1 gene − 121559 127024 5466 Locate
trnN-GUU gene + 127350 127421 72 Locate
trnR-ACG gene − 127994 128067 74 Locate
rrn5 gene − 128302 128422 121 Locate
rrn4.5 gene − 128678 128780 103 Locate
rrn23 gene − 128881 131689 2809 Locate
trnA-UGC gene − 131881 132759 879 Locate
trnI-GAU gene − 132824 133831 1008 Locate
rrn16 gene − 134121 135611 1491 Locate
trnV-GAC gene − 135839 135910 72 Locate
rps12 gene + 137518 138310 793 Locate
rps7 gene + 138364 138831 468 Locate
ndhB gene + 139159 141316 2158 Locate
trnL-CAA gene + 141861 141941 81 Locate
ycf2 gene − 142493 149350 6858 Locate
trnI-CAU gene + 149439 149512 74 Locate
rpl23 gene + 149678 149959 282 Locate
rpl2 gene + 149978 151469 1492 Locate
Status Available
Accession NC_067634.1
Length 151,563 bp
GC content 38.5%
Annotated genes 131
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 13 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources