Coordinate-aware organelle record

Phlomoides tatsienensis chloroplast genome

Available NC_085359.1 151,899 bp 130 coordinate-linked features
IRIR0 kb13 kb26 kb39 kb52 kb65 kb78 kb91 kb104 kb117 kb130 kb143 kbtrnH-GUG · gene · 7-80 bp · − strandpsbA · gene · 311-1,369 bp · − strandtrnK-UUU · gene · 1,602-4,192 bp · − strandmatK · gene · 1,906-3,441 bp · − strandrps16 · gene · 5,130-6,269 bp · − strandtrnQ-UUG · gene · 7,263-7,334 bp · − strandpsbK · gene · 7,671-7,856 bp · + strandpsbI · gene · 8,224-8,334 bp · + strandtrnS-GCU · gene · 8,461-8,548 bp · − strandtrnG-UCC · gene · 9,107-9,865 bp · + strandtrnR-UCU · gene · 10,042-10,113 bp · + strandatpA · gene · 10,210-11,733 bp · − strandatpF · gene · 11,822-13,033 bp · − strandatpH · gene · 13,399-13,644 bp · − strandatpI · gene · 14,633-15,376 bp · − strandrps2 · gene · 15,607-16,506 bp · − strandrpoC2 · gene · 16,537-20,727 bp · − strandrpoC1 · gene · 20,882-23,720 bp · − strandrpoB · gene · 23,747-26,959 bp · − strandtrnC-GCA · gene · 28,067-28,137 bp · + strandpetN · gene · 28,969-29,058 bp · + strandpsbM · gene · 29,861-29,965 bp · − strandtrnD-GUC · gene · 30,504-30,577 bp · − strandtrnY-GUA · gene · 30,690-30,773 bp · − strandtrnE-UUC · gene · 30,833-30,905 bp · − strandtrnT-GGU · gene · 31,497-31,568 bp · + strandpsbD · gene · 32,817-33,878 bp · + strandpsbC · gene · 33,826-35,247 bp · + strandtrnS-UGA · gene · 35,426-35,518 bp · − strandpsbZ · gene · 35,845-36,033 bp · + strandtrnG-GCC · gene · 36,263-36,333 bp · + strandtrnfM-CAU · gene · 36,486-36,559 bp · − strandrps14 · gene · 36,709-37,011 bp · − strandpsaB · gene · 37,139-39,343 bp · − strandpsaA · gene · 39,369-41,621 bp · − strandycf3 · gene · 42,352-44,290 bp · − strandtrnS-GGA · gene · 44,614-44,700 bp · + strandrps4 · gene · 44,986-45,591 bp · − strandtrnT-UGU · gene · 45,984-46,056 bp · − strandtrnL-UAA · gene · 46,726-47,291 bp · + strandtrnF-GAA · gene · 47,583-47,655 bp · + strandndhJ · gene · 48,334-48,810 bp · − strandndhK · gene · 48,911-49,672 bp · − strandndhC · gene · 49,642-50,004 bp · − strandtrnV-UAC · gene · 50,959-51,610 bp · − strandtrnM-CAU · gene · 51,799-51,871 bp · + strandatpE · gene · 52,093-52,494 bp · − strandatpB · gene · 52,491-53,987 bp · − strandrbcL · gene · 54,776-56,242 bp · + strandaccD · gene · 56,917-58,383 bp · + strandpsaI · gene · 59,068-59,178 bp · + strandycf4 · gene · 59,635-60,189 bp · + strandcemA · gene · 60,750-61,439 bp · + strandpetA · gene · 61,656-62,618 bp · + strandpsbJ · gene · 63,673-63,795 bp · − strandpsbL · gene · 63,933-64,049 bp · − strandpsbF · gene · 64,073-64,192 bp · − strandpsbE · gene · 64,207-64,458 bp · − strandpetL · gene · 65,388-65,483 bp · + strandpetG · gene · 65,658-65,771 bp · + strandtrnW-CCA · gene · 65,897-65,970 bp · − strandtrnP-UGG · gene · 66,134-66,207 bp · − strandpsaJ · gene · 66,482-66,616 bp · + strandrpl33 · gene · 67,090-67,290 bp · + strandrps18 · gene · 67,440-67,745 bp · + strandrpl20 · gene · 67,965-68,351 bp · − strandrps12 · gene · 69,114-97,230 bp · − strandrps12 · gene · 69,114-138,675 bp · + strandclpP · gene · 69,354-71,222 bp · − strandpsbB · gene · 71,661-73,187 bp · + strandpsbT · gene · 73,384-73,485 bp · + strandpsbN · gene · 73,559-73,690 bp · − strandpsbH · gene · 73,794-74,015 bp · + strandpetB · gene · 74,140-75,521 bp · + strandpetD · gene · 75,716-76,929 bp · + strandrpoA · gene · 77,092-78,105 bp · − strandrps11 · gene · 78,177-78,608 bp · − strandrpl36 · gene · 78,696-78,809 bp · − strandinfA · gene · 78,905-79,138 bp · − strandrps8 · gene · 79,261-79,674 bp · − strandrpl14 · gene · 79,847-80,215 bp · − strandrpl16 · gene · 80,342-81,649 bp · − strandrps3 · gene · 81,805-82,467 bp · − strandrpl22 · gene · 82,452-82,916 bp · − strandrps19 · gene · 82,976-83,248 bp · − strandrpl2 · gene · 83,307-84,798 bp · − strandrpl23 · gene · 84,817-85,098 bp · − strandtrnI-CAU · gene · 85,264-85,337 bp · − strandycf2 · gene · 85,426-92,253 bp · + strandtrnL-CAA · gene · 92,805-92,885 bp · − strandndhB · gene · 93,430-95,587 bp · − strandrps7 · gene · 95,916-96,383 bp · − strandtrnV-GAC · gene · 98,877-98,948 bp · + strandrrn16 · gene · 99,176-100,666 bp · + strandtrnI-GAU · gene · 100,956-101,964 bp · + strandtrnA-UGC · gene · 102,029-102,907 bp · + strandrrn23 · gene · 103,099-105,907 bp · + strandrrn4.5 · gene · 106,013-106,115 bp · + strandrrn5 · gene · 106,371-106,491 bp · + strandtrnR-ACG · gene · 106,726-106,799 bp · + strandtrnN-GUU · gene · 107,372-107,443 bp · − strandndhF · gene · 108,833-111,055 bp · − strandrpl32 · gene · 111,561-111,737 bp · + strandtrnL-UAG · gene · 112,272-112,351 bp · + strandccsA · gene · 112,436-113,407 bp · + strandndhD · gene · 113,588-115,090 bp · − strandpsaC · gene · 115,211-115,456 bp · − strandndhE · gene · 115,719-116,021 bp · − strandndhG · gene · 116,240-116,770 bp · − strandndhI · gene · 117,152-117,658 bp · − strandndhA · gene · 117,745-119,912 bp · − strandndhH · gene · 119,914-121,095 bp · − strandrps15 · gene · 121,197-121,532 bp · − strandycf1 · gene · 121,851-127,343 bp · − strandtrnN-GUU · gene · 127,669-127,740 bp · + strandtrnR-ACG · gene · 128,313-128,386 bp · − strandrrn5 · gene · 128,621-128,741 bp · − strandrrn4.5 · gene · 128,997-129,099 bp · − strandrrn23 · gene · 129,205-132,013 bp · − strandtrnA-UGC · gene · 132,205-133,083 bp · − strandtrnI-GAU · gene · 133,148-134,156 bp · − strandrrn16 · gene · 134,446-135,936 bp · − strandtrnV-GAC · gene · 136,164-136,235 bp · − strandrps7 · gene · 138,729-139,196 bp · + strandndhB · gene · 139,525-141,682 bp · + strandtrnL-CAA · gene · 142,227-142,307 bp · + strandycf2 · gene · 142,859-149,686 bp · − strandtrnI-CAU · gene · 149,775-149,848 bp · + strandrpl23 · gene · 150,014-150,295 bp · + strandrpl2 · gene · 150,314-151,805 bp · + strandPhlomoides tatsienensisANNOTATED PLASTOMENC_085359.1151,899 bp · 130 genesOuter ring: forward strand · inner ring: reverse strand · click a gene to open its pageGene functionTranslation RnaPhotosystem IiOtherRibosomal ProteinAtp SynthaseRna PolymeraseCytochromePhotosystem INad DehydrogenaseRibosomal RnaVerified annotationSource: NCBI GenBankAccession: NC_085359.1Features: 130 coordinate-linked genesHover for coordinates · click for gene page

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

130 features
GeneTypeGroupStrandStartEndLength
trnH-GUGgenetranslation-rna−68074
psbAgenephotosystem-ii−31013691059
trnK-UUUgenetranslation-rna−160141922591
matKgeneother−190534411536
rps16generibosomal-protein−512962691140
trnQ-UUGgenetranslation-rna−7262733472
psbKgenephotosystem-ii+76707856186
psbIgenephotosystem-ii+82238334111
trnS-GCUgenetranslation-rna−8460854888
trnG-UCCgenetranslation-rna+91069865759
trnR-UCUgenetranslation-rna+100411011372
atpAgeneatp-synthase−10209117331524
atpFgeneatp-synthase−11821130331212
atpHgeneatp-synthase−1339813644246
atpIgeneatp-synthase−1463215376744
rps2generibosomal-protein−1560616506900
rpoC2generna-polymerase−16536207274191
rpoC1generna-polymerase−20881237202839
rpoBgenerna-polymerase−23746269593213
trnC-GCAgenetranslation-rna+280662813771
petNgenecytochrome+289682905890
psbMgenephotosystem-ii−2986029965105
trnD-GUCgenetranslation-rna−305033057774
trnY-GUAgenetranslation-rna−306893077384
trnE-UUCgenetranslation-rna−308323090573
trnT-GGUgenetranslation-rna+314963156872
psbDgenephotosystem-ii+32816338781062
psbCgenephotosystem-ii+33825352471422
trnS-UGAgenetranslation-rna−354253551893
psbZgenephotosystem-ii+3584436033189
trnG-GCCgenetranslation-rna+362623633371
trnfM-CAUgenetranslation-rna−364853655974
rps14generibosomal-protein−3670837011303
psaBgenephotosystem-i−37138393432205
psaAgenephotosystem-i−39368416212253
ycf3geneother−42351442901939
trnS-GGAgenetranslation-rna+446134470087
rps4generibosomal-protein−4498545591606
trnT-UGUgenetranslation-rna−459834605673
trnL-UAAgenetranslation-rna+4672547291566
trnF-GAAgenetranslation-rna+475824765573
ndhJgenenad-dehydrogenase−4833348810477
ndhKgenenad-dehydrogenase−4891049672762
ndhCgenenad-dehydrogenase−4964150004363
trnV-UACgenetranslation-rna−5095851610652
trnM-CAUgenetranslation-rna+517985187173
atpEgeneatp-synthase−5209252494402
atpBgeneatp-synthase−52490539871497
rbcLgeneother+54775562421467
accDgeneother+56916583831467
psaIgenephotosystem-i+5906759178111
ycf4geneother+5963460189555
cemAgeneother+6074961439690
petAgenecytochrome+6165562618963
psbJgenephotosystem-ii−6367263795123
psbLgenephotosystem-ii−6393264049117
psbFgenephotosystem-ii−6407264192120
psbEgenephotosystem-ii−6420664458252
petLgenecytochrome+653876548396
petGgenecytochrome+6565765771114
trnW-CCAgenetranslation-rna−658966597074
trnP-UGGgenetranslation-rna−661336620774
psaJgenephotosystem-i+6648166616135
rpl33generibosomal-protein+6708967290201
rps18generibosomal-protein+6743967745306
rpl20generibosomal-protein−6796468351387
rps12generibosomal-protein−691139723028117
rps12generibosomal-protein+6911313867569562
clpPgeneother−69353712221869
psbBgenephotosystem-ii+71660731871527
psbTgenephotosystem-ii+7338373485102
psbNgenephotosystem-ii−7355873690132
psbHgenephotosystem-ii+7379374015222
petBgenecytochrome+74139755211382
petDgenecytochrome+75715769291214
rpoAgenerna-polymerase−77091781051014
rps11generibosomal-protein−7817678608432
rpl36generibosomal-protein−7869578809114
infAgeneother−7890479138234
rps8generibosomal-protein−7926079674414
rpl14generibosomal-protein−7984680215369
rpl16generibosomal-protein−80341816491308
rps3generibosomal-protein−8180482467663
rpl22generibosomal-protein−8245182916465
rps19generibosomal-protein−8297583248273
rpl2generibosomal-protein−83306847981492
rpl23generibosomal-protein−8481685098282
trnI-CAUgenetranslation-rna−852638533774
ycf2geneother+85425922536828
trnL-CAAgenetranslation-rna−928049288581
ndhBgenenad-dehydrogenase−93429955872158
rps7generibosomal-protein−9591596383468
trnV-GACgenetranslation-rna+988769894872
rrn16generibosomal-rna+991751006661491
trnI-GAUgenetranslation-rna+1009551019641009
trnA-UGCgenetranslation-rna+102028102907879
rrn23generibosomal-rna+1030981059072809
rrn4.5generibosomal-rna+106012106115103
rrn5generibosomal-rna+106370106491121
trnR-ACGgenetranslation-rna+10672510679974
trnN-GUUgenetranslation-rna−10737110744372
ndhFgenenad-dehydrogenase−1088321110552223
rpl32generibosomal-protein+111560111737177
trnL-UAGgenetranslation-rna+11227111235180
ccsAgeneother+112435113407972
ndhDgenenad-dehydrogenase−1135871150901503
psaCgenephotosystem-i−115210115456246
ndhEgenenad-dehydrogenase−115718116021303
ndhGgenenad-dehydrogenase−116239116770531
ndhIgenenad-dehydrogenase−117151117658507
ndhAgenenad-dehydrogenase−1177441199122168
ndhHgenenad-dehydrogenase−1199131210951182
rps15generibosomal-protein−121196121532336
ycf1geneother−1218501273435493
trnN-GUUgenetranslation-rna+12766812774072
trnR-ACGgenetranslation-rna−12831212838674
rrn5generibosomal-rna−128620128741121
rrn4.5generibosomal-rna−128996129099103
rrn23generibosomal-rna−1292041320132809
trnA-UGCgenetranslation-rna−132204133083879
trnI-GAUgenetranslation-rna−1331471341561009
rrn16generibosomal-rna−1344451359361491
trnV-GACgenetranslation-rna−13616313623572
rps7generibosomal-protein+138728139196468
ndhBgenenad-dehydrogenase+1395241416822158
trnL-CAAgenetranslation-rna+14222614230781
ycf2geneother−1428581496866828
trnI-CAUgenetranslation-rna+14977414984874
rpl23generibosomal-protein+150013150295282
rpl2generibosomal-protein+1503131518051492

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources