Phlomoides younghusbandii chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · PP234524.1 · 2–75 bp · −
psbA · PP234524.1 · 278–1,336 bp · −
trnK-UUU · PP234524.1 · 1,569–4,157 bp · −
matK · PP234524.1 · 1,873–3,408 bp · −
rps16 · PP234524.1 · 5,094–6,233 bp · −
trnQ-UUG · PP234524.1 · 7,230–7,301 bp · −
trnS-GCU · PP234524.1 · 8,431–8,518 bp · −
atpA · PP234524.1 · 10,182–11,705 bp · −
atpF · PP234524.1 · 11,795–13,000 bp · −
atpH · PP234524.1 · 13,369–13,614 bp · −
atpI · PP234524.1 · 14,607–15,350 bp · −
rps2 · PP234524.1 · 15,581–16,417 bp · −
rpoC2 · PP234524.1 · 16,511–20,701 bp · −
rpoC1 · PP234524.1 · 20,856–23,693 bp · −
rpoB · PP234524.1 · 23,720–26,932 bp · −
psbM · PP234524.1 · 29,829–29,933 bp · −
trnD-GUC · PP234524.1 · 30,473–30,546 bp · −
trnY-GUA · PP234524.1 · 30,660–30,743 bp · −
trnE-UUC · PP234524.1 · 30,803–30,875 bp · −
trnS-UGA · PP234524.1 · 35,425–35,517 bp · −
trnfM-CAU · PP234524.1 · 36,483–36,556 bp · −
rps14 · PP234524.1 · 36,706–37,008 bp · −
psaB · PP234524.1 · 37,136–39,340 bp · −
psaA · PP234524.1 · 39,366–41,618 bp · −
ycf3 · PP234524.1 · 42,344–44,277 bp · −
rps4 · PP234524.1 · 44,964–45,569 bp · −
trnT-UGU · PP234524.1 · 45,960–46,032 bp · −
ndhJ · PP234524.1 · 48,311–48,787 bp · −
ndhK · PP234524.1 · 48,888–49,649 bp · −
ndhC · PP234524.1 · 49,619–49,981 bp · −
trnV-UAC · PP234524.1 · 50,957–51,609 bp · −
atpE · PP234524.1 · 52,093–52,494 bp · −
atpB · PP234524.1 · 52,491–53,987 bp · −
psbJ · PP234524.1 · 63,636–63,758 bp · −
psbL · PP234524.1 · 63,891–64,007 bp · −
psbF · PP234524.1 · 64,031–64,150 bp · −
psbE · PP234524.1 · 64,165–64,416 bp · −
trnW-CCA · PP234524.1 · 65,858–65,931 bp · −
trnP-UGG · PP234524.1 · 66,095–66,168 bp · −
rpl20 · PP234524.1 · 67,923–68,309 bp · −
rps12 · PP234524.1 · 69,069–69,182 bp · −
rps12 · PP234524.1 · 96,404–97,197 bp · −
clpP · PP234524.1 · 69,309–71,179 bp · −
psbN · PP234524.1 · 73,512–73,643 bp · −
rpoA · PP234524.1 · 77,045–78,058 bp · −
rps11 · PP234524.1 · 78,130–78,561 bp · −
rpl36 · PP234524.1 · 78,649–78,762 bp · −
infA · PP234524.1 · 78,858–79,091 bp · −
rps8 · PP234524.1 · 79,214–79,627 bp · −
rpl14 · PP234524.1 · 79,800–80,168 bp · −
rpl16 · PP234524.1 · 80,295–81,599 bp · −
rps3 · PP234524.1 · 81,755–82,417 bp · −
rpl22 · PP234524.1 · 82,402–82,866 bp · −
rpl2 · PP234524.1 · 83,280–84,771 bp · −
rpl23 · PP234524.1 · 84,790–85,071 bp · −
trnI-CAU · PP234524.1 · 85,237–85,310 bp · −
trnL-CAA · PP234524.1 · 92,772–92,852 bp · −
ndhB · PP234524.1 · 93,397–95,554 bp · −
rps7 · PP234524.1 · 95,883–96,350 bp · −
trnN-GUU · PP234524.1 · 107,299–107,370 bp · −
ndhF · PP234524.1 · 108,760–110,982 bp · −
ndhD · PP234524.1 · 113,513–115,015 bp · −
psaC · PP234524.1 · 115,138–115,383 bp · −
ndhE · PP234524.1 · 115,646–115,948 bp · −
ndhG · PP234524.1 · 116,167–116,697 bp · −
ndhI · PP234524.1 · 117,078–117,584 bp · −
ndhA · PP234524.1 · 117,671–119,836 bp · −
ndhH · PP234524.1 · 119,838–121,019 bp · −
rps15 · PP234524.1 · 121,120–121,455 bp · −
ycf1 · PP234524.1 · 121,775–127,267 bp · −
trnR-ACG · PP234524.1 · 128,237–128,310 bp · −
rrn5 · PP234524.1 · 128,545–128,665 bp · −
rrn4.5 · PP234524.1 · 128,921–129,023 bp · −
rrn23 · PP234524.1 · 129,124–131,932 bp · −
trnA-UGC · PP234524.1 · 132,124–133,002 bp · −
trnI-GAU · PP234524.1 · 133,067–134,071 bp · −
rrn16 · PP234524.1 · 134,361–135,851 bp · −
trnV-GAC · PP234524.1 · 136,079–136,150 bp · −
ycf2 · PP234524.1 · 142,743–149,564 bp · −
psbK · PP234524.1 · 7,638–7,823 bp · +
psbI · PP234524.1 · 8,198–8,308 bp · +
trnG-UCC · PP234524.1 · 9,079–9,837 bp · +
trnR-UCU · PP234524.1 · 10,014–10,085 bp · +
trnC-GCA · PP234524.1 · 28,034–28,104 bp · +
petN · PP234524.1 · 28,942–29,031 bp · +
trnT-GGU · PP234524.1 · 31,443–31,514 bp · +
psbD · PP234524.1 · 32,763–33,824 bp · +
psbC · PP234524.1 · 33,772–35,193 bp · +
psbZ · PP234524.1 · 35,844–36,032 bp · +
trnG-GCC · PP234524.1 · 36,263–36,333 bp · +
trnS-GGA · PP234524.1 · 44,594–44,680 bp · +
trnL-UAA · PP234524.1 · 46,696–47,268 bp · +
trnF-GAA · PP234524.1 · 47,560–47,632 bp · +
trnM-CAU · PP234524.1 · 51,798–51,870 bp · +
rbcL · PP234524.1 · 54,774–56,240 bp · +
accD · PP234524.1 · 56,931–58,397 bp · +
psaI · PP234524.1 · 59,077–59,187 bp · +
ycf4 · PP234524.1 · 59,620–60,174 bp · +
cemA · PP234524.1 · 60,735–61,424 bp · +
petA · PP234524.1 · 61,641–62,603 bp · +
petL · PP234524.1 · 65,350–65,445 bp · +
petG · PP234524.1 · 65,620–65,733 bp · +
psaJ · PP234524.1 · 66,443–66,577 bp · +
rpl33 · PP234524.1 · 67,048–67,248 bp · +
rps18 · PP234524.1 · 67,398–67,703 bp · +
rps12 · PP234524.1 · 137,766–138,559 bp · +
psbB · PP234524.1 · 71,616–73,142 bp · +
psbT · PP234524.1 · 73,337–73,438 bp · +
psbH · PP234524.1 · 73,747–73,968 bp · +
petB · PP234524.1 · 74,093–75,473 bp · +
petD · PP234524.1 · 75,668–76,882 bp · +
ycf2 · PP234524.1 · 85,399–92,220 bp · +
trnV-GAC · PP234524.1 · 98,813–98,884 bp · +
rrn16 · PP234524.1 · 99,112–100,602 bp · +
trnI-GAU · PP234524.1 · 100,892–101,896 bp · +
trnA-UGC · PP234524.1 · 101,961–102,839 bp · +
rrn23 · PP234524.1 · 103,031–105,839 bp · +
rrn4.5 · PP234524.1 · 105,940–106,042 bp · +
rrn5 · PP234524.1 · 106,298–106,418 bp · +
trnR-ACG · PP234524.1 · 106,653–106,726 bp · +
rpl32 · PP234524.1 · 111,492–111,668 bp · +
trnL-UAG · PP234524.1 · 112,197–112,276 bp · +
ccsA · PP234524.1 · 112,361–113,332 bp · +
trnN-GUU · PP234524.1 · 127,593–127,664 bp · +
rps7 · PP234524.1 · 138,613–139,080 bp · +
ndhB · PP234524.1 · 139,409–141,566 bp · +
trnL-CAA · PP234524.1 · 142,111–142,191 bp · +
trnI-CAU · PP234524.1 · 149,653–149,726 bp · +
rpl23 · PP234524.1 · 149,892–150,173 bp · +
rpl2 · PP234524.1 · 150,192–151,683 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Phlomoides younghusbandii
ANNOTATED PLASTOME
PP234524.1
151,777 bp · 129 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37944 75888 113833 151777 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
130 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 2 75 74 Locate
psbA gene − 278 1336 1059 Locate
trnK-UUU gene − 1569 4157 2589 Locate
matK gene − 1873 3408 1536 Locate
rps16 gene − 5094 6233 1140 Locate
trnQ-UUG gene − 7230 7301 72 Locate
psbK gene + 7638 7823 186 Locate
psbI gene + 8198 8308 111 Locate
trnS-GCU gene − 8431 8518 88 Locate
trnG-UCC gene + 9079 9837 759 Locate
trnR-UCU gene + 10014 10085 72 Locate
atpA gene − 10182 11705 1524 Locate
atpF gene − 11795 13000 1206 Locate
atpH gene − 13369 13614 246 Locate
atpI gene − 14607 15350 744 Locate
rps2 gene − 15581 16417 837 Locate
rpoC2 gene − 16511 20701 4191 Locate
rpoC1 gene − 20856 23693 2838 Locate
rpoB gene − 23720 26932 3213 Locate
trnC-GCA gene + 28034 28104 71 Locate
petN gene + 28942 29031 90 Locate
psbM gene − 29829 29933 105 Locate
trnD-GUC gene − 30473 30546 74 Locate
trnY-GUA gene − 30660 30743 84 Locate
trnE-UUC gene − 30803 30875 73 Locate
trnT-GGU gene + 31443 31514 72 Locate
psbD gene + 32763 33824 1062 Locate
psbC gene + 33772 35193 1422 Locate
trnS-UGA gene − 35425 35517 93 Locate
psbZ gene + 35844 36032 189 Locate
trnG-GCC gene + 36263 36333 71 Locate
trnfM-CAU gene − 36483 36556 74 Locate
rps14 gene − 36706 37008 303 Locate
psaB gene − 37136 39340 2205 Locate
psaA gene − 39366 41618 2253 Locate
ycf3 gene − 42344 44277 1934 Locate
trnS-GGA gene + 44594 44680 87 Locate
rps4 gene − 44964 45569 606 Locate
trnT-UGU gene − 45960 46032 73 Locate
trnL-UAA gene + 46696 47268 573 Locate
trnF-GAA gene + 47560 47632 73 Locate
ndhJ gene − 48311 48787 477 Locate
ndhK gene − 48888 49649 762 Locate
ndhC gene − 49619 49981 363 Locate
trnV-UAC gene − 50957 51609 653 Locate
trnM-CAU gene + 51798 51870 73 Locate
atpE gene − 52093 52494 402 Locate
atpB gene − 52491 53987 1497 Locate
rbcL gene + 54774 56240 1467 Locate
accD gene + 56931 58397 1467 Locate
psaI gene + 59077 59187 111 Locate
ycf4 gene + 59620 60174 555 Locate
cemA gene + 60735 61424 690 Locate
petA gene + 61641 62603 963 Locate
psbJ gene − 63636 63758 123 Locate
psbL gene − 63891 64007 117 Locate
psbF gene − 64031 64150 120 Locate
psbE gene − 64165 64416 252 Locate
petL gene + 65350 65445 96 Locate
petG gene + 65620 65733 114 Locate
trnW-CCA gene − 65858 65931 74 Locate
trnP-UGG gene − 66095 66168 74 Locate
psaJ gene + 66443 66577 135 Locate
rpl33 gene + 67048 67248 201 Locate
rps18 gene + 67398 67703 306 Locate
rpl20 gene − 67923 68309 387 Locate
rps12 gene − 69069 69182 114 Locate
clpP gene − 69309 71179 1871 Locate
psbB gene + 71616 73142 1527 Locate
psbT gene + 73337 73438 102 Locate
psbN gene − 73512 73643 132 Locate
psbH gene + 73747 73968 222 Locate
petB gene + 74093 75473 1381 Locate
petD gene + 75668 76882 1215 Locate
rpoA gene − 77045 78058 1014 Locate
rps11 gene − 78130 78561 432 Locate
rpl36 gene − 78649 78762 114 Locate
infA gene − 78858 79091 234 Locate
rps8 gene − 79214 79627 414 Locate
rpl14 gene − 79800 80168 369 Locate
rpl16 gene − 80295 81599 1305 Locate
rps3 gene − 81755 82417 663 Locate
rpl22 gene − 82402 82866 465 Locate
rpl2 gene − 83280 84771 1492 Locate
rpl23 gene − 84790 85071 282 Locate
trnI-CAU gene − 85237 85310 74 Locate
ycf2 gene + 85399 92220 6822 Locate
trnL-CAA gene − 92772 92852 81 Locate
ndhB gene − 93397 95554 2158 Locate
rps7 gene − 95883 96350 468 Locate
rps12 gene − 96404 97197 794 Locate
trnV-GAC gene + 98813 98884 72 Locate
rrn16 gene + 99112 100602 1491 Locate
trnI-GAU gene + 100892 101896 1005 Locate
trnA-UGC gene + 101961 102839 879 Locate
rrn23 gene + 103031 105839 2809 Locate
rrn4.5 gene + 105940 106042 103 Locate
rrn5 gene + 106298 106418 121 Locate
trnR-ACG gene + 106653 106726 74 Locate
trnN-GUU gene − 107299 107370 72 Locate
ndhF gene − 108760 110982 2223 Locate
rpl32 gene + 111492 111668 177 Locate
trnL-UAG gene + 112197 112276 80 Locate
ccsA gene + 112361 113332 972 Locate
ndhD gene − 113513 115015 1503 Locate
psaC gene − 115138 115383 246 Locate
ndhE gene − 115646 115948 303 Locate
ndhG gene − 116167 116697 531 Locate
ndhI gene − 117078 117584 507 Locate
ndhA gene − 117671 119836 2166 Locate
ndhH gene − 119838 121019 1182 Locate
rps15 gene − 121120 121455 336 Locate
ycf1 gene − 121775 127267 5493 Locate
trnN-GUU gene + 127593 127664 72 Locate
trnR-ACG gene − 128237 128310 74 Locate
rrn5 gene − 128545 128665 121 Locate
rrn4.5 gene − 128921 129023 103 Locate
rrn23 gene − 129124 131932 2809 Locate
trnA-UGC gene − 132124 133002 879 Locate
trnI-GAU gene − 133067 134071 1005 Locate
rrn16 gene − 134361 135851 1491 Locate
trnV-GAC gene − 136079 136150 72 Locate
rps12 gene + 137766 138559 794 Locate
rps7 gene + 138613 139080 468 Locate
ndhB gene + 139409 141566 2158 Locate
trnL-CAA gene + 142111 142191 81 Locate
ycf2 gene − 142743 149564 6822 Locate
trnI-CAU gene + 149653 149726 74 Locate
rpl23 gene + 149892 150173 282 Locate
rpl2 gene + 150192 151683 1492 Locate
Status Available
Accession PP234524.1
Length 151,777 bp
GC content 38.5%
Annotated genes 129
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 12 Ribosomal Protein 25 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources