Coordinate-aware organelle record

Pogostemon stellatus chloroplast genome

Available NC_031434.1 151,824 bp 134 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

134 features

Gene	Type	Group	Strand	Start	End	Length
tRNA-His (GUG)	gene	translation-rna	−	1	76	75
psbA	gene	photosystem-ii	−	281	1340	1059
tRNA-Lys (UUU)	gene	translation-rna	−	1572	4158	2586
matK	gene	other	−	1871	3407	1536
rps16	gene	ribosomal-protein	−	5034	6178	1144
tRNA-Gln (UUG)	gene	translation-rna	−	7279	7351	72
psbK	gene	photosystem-ii	+	7676	7862	186
psbI	gene	photosystem-ii	+	8218	8329	111
tRNA-Ser (GCU)	gene	translation-rna	−	8450	8538	88
tRNA-Gly (UCC)	gene	translation-rna	+	9200	9959	759
tRNA-Arg (UCU)	gene	translation-rna	+	10152	10227	75
atpA	gene	atp-synthase	−	10324	11848	1524
atpF	gene	atp-synthase	−	11937	13215	1278
atpH	gene	atp-synthase	−	13572	13818	246
atpI	gene	atp-synthase	−	14758	15502	744
rps2	gene	ribosomal-protein	−	15715	16426	711
rpoC2	gene	rna-polymerase	−	16648	20809	4161
rpoC1	gene	rna-polymerase	−	20963	23811	2848
rpoB	gene	rna-polymerase	−	23837	27050	3213
tRNA-Cys (GCA)	gene	translation-rna	+	28018	28089	71
petN	gene	cytochrome	+	28305	28395	90
psbM	gene	photosystem-ii	−	29374	29479	105
tRNA-Asp (GUC)	gene	translation-rna	−	30001	30075	74
tRNA-Tyr (GUA)	gene	translation-rna	−	30189	30273	84
tRNA-Glu (UUC)	gene	translation-rna	−	30332	30405	73
tRNA-Thr (GGU)	gene	translation-rna	+	30982	31054	72
psbD	gene	photosystem-ii	+	32182	33244	1062
psbC	gene	photosystem-ii	+	33191	34613	1422
tRNA-Ser (UGA)	gene	translation-rna	−	34851	34944	93
psbZ	gene	photosystem-ii	+	35246	35435	189
tRNA-Gly (GCC)	gene	translation-rna	+	35700	35771	71
tRNA-fM (CAU)	gene	translation-rna	−	35925	35999	74
rps14	gene	ribosomal-protein	−	36148	36451	303
psaB	gene	photosystem-i	−	36578	38783	2205
psaA	gene	photosystem-i	−	38808	41061	2253
ycf3	gene	other	−	41779	43722	1943
tRNA-Ser (GGA)	gene	translation-rna	+	44617	44704	87
rps4	gene	ribosomal-protein	−	44968	45574	606
tRNA-Thr (UGU)	gene	translation-rna	−	45966	46039	73
tRNA-Leu (UAA)	gene	translation-rna	+	46685	47252	567
tRNA-Phe (GAA)	gene	translation-rna	+	47552	47625	73
ndhJ	gene	nad-dehydrogenase	−	48246	48723	477
ndhK	gene	nad-dehydrogenase	−	48824	49502	678
ndhC	gene	nad-dehydrogenase	−	49556	49919	363
tRNA-Val (UAC)	gene	translation-rna	−	50698	51356	658
tRNA-Met (CAU)	gene	translation-rna	+	51547	51620	73
atpE	gene	atp-synthase	−	51842	52244	402
atpB	gene	atp-synthase	−	52240	53737	1497
rbcL	gene	other	+	54522	55983	1461
accD	gene	other	+	56714	58205	1491
psaI	gene	photosystem-i	+	58895	59006	111
ycf4	gene	other	+	59449	60004	555
cemA	gene	other	+	60553	61243	690
petA	gene	cytochrome	+	61454	62417	963
psbJ	gene	photosystem-ii	−	63337	63460	123
psbL	gene	photosystem-ii	−	63602	63719	117
psbF	gene	photosystem-ii	−	63742	63862	120
psbE	gene	photosystem-ii	−	63876	64128	252
petL	gene	cytochrome	+	65055	65151	96
petG	gene	cytochrome	+	65326	65440	114
tRNA-Trp (CCA)	gene	translation-rna	−	65556	65630	74
tRNA-Pro (UGG)	gene	translation-rna	−	65796	65870	74
psaJ	gene	photosystem-i	+	66135	66270	135
rpl33	gene	ribosomal-protein	+	66750	66951	201
rps18	gene	ribosomal-protein	+	67134	67440	306
rpl20	gene	ribosomal-protein	−	67651	68038	387
rps12	gene	ribosomal-protein	−	68801	97059	28258
rps12	gene	ribosomal-protein	+	68801	138571	69770
clpP	gene	other	−	69042	70989	1947
psbB	gene	photosystem-ii	+	71437	72964	1527
psbT	gene	photosystem-ii	+	73144	73252	108
psbN	gene	photosystem-ii	−	73318	73450	132
psbH	gene	photosystem-ii	+	73553	73775	222
petB	gene	cytochrome	+	73899	75287	1388
petD	gene	cytochrome	+	75473	76713	1240
rpoA	gene	rna-polymerase	−	76864	77881	1017
rps11	gene	ribosomal-protein	−	77952	78369	417
rpl36	gene	ribosomal-protein	−	78471	78585	114
infA	gene	other	−	78680	78914	234
rps8	gene	ribosomal-protein	−	79032	79446	414
rpl14	gene	ribosomal-protein	−	79620	79989	369
rpl16	gene	ribosomal-protein	−	80121	81446	1325
rps3	gene	ribosomal-protein	−	81598	82261	663
rpl22	gene	ribosomal-protein	−	82245	82716	471
rps19	gene	ribosomal-protein	−	82775	83054	279
rpl2	gene	ribosomal-protein	−	83108	84596	1488
rpl23	gene	ribosomal-protein	−	84614	84896	282
tRNA-His (CAU)	gene	translation-rna	−	85061	85135	74
ycf2	gene	other	+	85223	92078	6855
ycf15	gene	other	+	92219	92369	150
tRNA-Leu (CAA)	gene	translation-rna	−	92624	92705	81
ndhB	gene	nad-dehydrogenase	−	93258	95470	2212
rps7	gene	ribosomal-protein	−	95744	96212	468
tRNA-Val (GAC)	gene	translation-rna	+	98680	98752	72
rrn16	gene	ribosomal-rna	+	99079	99469	390
tRNA-Ile (GAU)	gene	translation-rna	+	100759	101766	1007
tRNA-Ala (UGC)	gene	translation-rna	+	101834	102713	879
rrn23	gene	ribosomal-rna	+	102896	105713	2817
rrn4.5	gene	ribosomal-rna	+	105811	105914	103
rrn5	gene	ribosomal-rna	+	106165	106286	121
tRNA-Arg (ACG)	gene	translation-rna	+	106532	106606	74
tRNA-Asn (GUU)	gene	translation-rna	−	107169	107241	72
ycf1	gene	other	+	107575	108656	1081
ndhF	gene	nad-dehydrogenase	−	108639	110856	2217
rpl32	gene	ribosomal-protein	+	111348	111519	171
tRNA-Leu (UAG)	gene	translation-rna	+	112242	112322	80
ccsA	gene	other	+	112405	113404	999
ndhD	gene	nad-dehydrogenase	−	113577	115080	1503
psaC	gene	photosystem-i	−	115197	115443	246
ndhE	gene	nad-dehydrogenase	−	115695	116001	306
ndhG	gene	nad-dehydrogenase	−	116217	116748	531
ndhI	gene	nad-dehydrogenase	−	117060	117567	507
ndhA	gene	nad-dehydrogenase	−	117662	119799	2137
ndhH	gene	nad-dehydrogenase	−	119800	120982	1182
rps15	gene	ribosomal-protein	−	121092	121365	273
ycf1	gene	other	−	121738	127261	5523
tRNA-Asn (GUU)	gene	translation-rna	+	127595	127667	72
tRNA-Arg (ACG)	gene	translation-rna	−	128230	128304	74
rrn5	gene	ribosomal-rna	−	128550	128671	121
rrn4.5	gene	ribosomal-rna	−	128922	129025	103
rrn23	gene	ribosomal-rna	−	129123	131940	2817
tRNA-Ala (UGC)	gene	translation-rna	−	132123	133002	879
tRNA-Ile (GAU)	gene	translation-rna	−	133070	134077	1007
rrn16	gene	ribosomal-rna	−	135367	135757	390
tRNA-Val (GAC)	gene	translation-rna	−	136084	136156	72
rps7	gene	ribosomal-protein	+	138624	139092	468
ndhB	gene	nad-dehydrogenase	+	139366	141578	2212
tRNA-Leu (CAA)	gene	translation-rna	+	142131	142212	81
ycf15	gene	other	−	142467	142617	150
ycf2	gene	other	−	142758	149613	6855
tRNA-His (CAU)	gene	translation-rna	+	149701	149775	74
rpl23	gene	ribosomal-protein	+	149940	150222	282
rpl2	gene	ribosomal-protein	+	150240	151728	1488
rps19	gene	ribosomal-protein	+	151782	151824	42

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_031434.1DNA · accDNC_031434DNA · atpBNC_031434DNA · matKNC_031434DNA · ndhFNC_031434DNA · psbANC_031434DNA · rbcLNC_031434DNA · rps12NC_031434DNA · ycf1NC_031434