Pogostemon yatabeanus chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
tRNA-His (GUG) · NC_031433.1 · 2–76 bp · −
psbA · NC_031433.1 · 282–1,340 bp · −
tRNA-Lys (UUU) · NC_031433.1 · 1,573–4,156 bp · −
matK · NC_031433.1 · 1,872–3,407 bp · −
rps16 · NC_031433.1 · 5,032–6,176 bp · −
tRNA-Gln (UUG) · NC_031433.1 · 7,348–7,419 bp · −
tRNA-Ser (GCU) · NC_031433.1 · 8,524–8,611 bp · −
atpA · NC_031433.1 · 10,401–11,924 bp · −
atpF · NC_031433.1 · 12,015–13,279 bp · −
atpH · NC_031433.1 · 13,649–13,894 bp · −
atpI · NC_031433.1 · 14,860–15,603 bp · −
rps2 · NC_031433.1 · 15,817–16,527 bp · −
rpoC2 · NC_031433.1 · 16,749–20,909 bp · −
rpoC1 · NC_031433.1 · 21,064–23,894 bp · −
rpoB · NC_031433.1 · 23,921–27,133 bp · −
psbM · NC_031433.1 · 29,898–30,002 bp · −
tRNA-Asp (GUC) · NC_031433.1 · 30,509–30,582 bp · −
tRNA-Tyr (GUA) · NC_031433.1 · 30,692–30,775 bp · −
tRNA-Glu (UUC) · NC_031433.1 · 30,835–30,907 bp · −
tRNA-Ser (UGA) · NC_031433.1 · 35,346–35,438 bp · −
tRNA-fM (CAU) · NC_031433.1 · 36,420–36,493 bp · −
rps14 · NC_031433.1 · 36,643–36,945 bp · −
psaB · NC_031433.1 · 37,073–39,277 bp · −
psaA · NC_031433.1 · 39,303–41,555 bp · −
ycf3 · NC_031433.1 · 42,297–44,258 bp · −
rps4 · NC_031433.1 · 45,512–46,117 bp · −
tRNA-Thr (UGU) · NC_031433.1 · 46,464–46,536 bp · −
ndhJ · NC_031433.1 · 48,991–49,467 bp · −
ndhK · NC_031433.1 · 49,569–50,246 bp · −
ndhC · NC_031433.1 · 50,302–50,664 bp · −
tRNA-Val (UAC) · NC_031433.1 · 51,472–52,128 bp · −
atpE · NC_031433.1 · 52,617–53,018 bp · −
atpB · NC_031433.1 · 53,015–54,511 bp · −
psbJ · NC_031433.1 · 64,136–64,258 bp · −
psbL · NC_031433.1 · 64,401–64,517 bp · −
psbF · NC_031433.1 · 64,541–64,660 bp · −
psbE · NC_031433.1 · 64,675–64,926 bp · −
tRNA-Trp (CCA) · NC_031433.1 · 66,359–66,432 bp · −
tRNA-Pro (UGG) · NC_031433.1 · 66,599–66,672 bp · −
rpl20 · NC_031433.1 · 68,428–68,814 bp · −
rps12 · NC_031433.1 · 69,579–69,692 bp · −
rps12 · NC_031433.1 · 97,049–97,842 bp · −
clpP · NC_031433.1 · 69,821–71,780 bp · −
psbN · NC_031433.1 · 74,110–74,241 bp · −
rpoA · NC_031433.1 · 77,666–78,673 bp · −
rps11 · NC_031433.1 · 78,745–79,161 bp · −
rpl36 · NC_031433.1 · 79,264–79,377 bp · −
infA · NC_031433.1 · 79,473–79,706 bp · −
rps8 · NC_031433.1 · 79,825–80,238 bp · −
rpl14 · NC_031433.1 · 80,411–80,779 bp · −
rpl16 · NC_031433.1 · 80,912–82,233 bp · −
rps3 · NC_031433.1 · 82,378–83,040 bp · −
rpl22 · NC_031433.1 · 83,025–83,495 bp · −
rps19 · NC_031433.1 · 83,555–83,833 bp · −
rpl2 · NC_031433.1 · 83,888–85,375 bp · −
rpl23 · NC_031433.1 · 85,394–85,675 bp · −
tRNA-His (CAU) · NC_031433.1 · 85,841–85,914 bp · −
tRNA-Leu (CAA) · NC_031433.1 · 93,405–93,485 bp · −
ndhB · NC_031433.1 · 94,042–96,253 bp · −
rps7 · NC_031433.1 · 96,528–96,995 bp · −
tRNA-Asn (GUU) · NC_031433.1 · 107,979–108,050 bp · −
ndhF · NC_031433.1 · 109,449–111,665 bp · −
ndhD · NC_031433.1 · 114,390–115,892 bp · −
psaC · NC_031433.1 · 116,009–116,254 bp · −
ndhE · NC_031433.1 · 116,507–116,812 bp · −
ndhG · NC_031433.1 · 117,029–117,559 bp · −
ndhI · NC_031433.1 · 117,873–118,379 bp · −
ndhA · NC_031433.1 · 118,495–120,634 bp · −
ndhH · NC_031433.1 · 120,636–121,817 bp · −
rps15 · NC_031433.1 · 121,928–122,200 bp · −
ycf1 · NC_031433.1 · 122,586–128,114 bp · −
tRNA-Arg (ACG) · NC_031433.1 · 129,088–129,161 bp · −
rrn5 · NC_031433.1 · 129,408–129,528 bp · −
rrn4.5 · NC_031433.1 · 129,780–129,882 bp · −
rrn23 · NC_031433.1 · 129,981–132,797 bp · −
tRNA-Ala (UGC) · NC_031433.1 · 132,981–133,859 bp · −
tRNA-Ile (GAU) · NC_031433.1 · 133,928–134,934 bp · −
rrn16 · NC_031433.1 · 136,225–136,614 bp · −
tRNA-Val (GAC) · NC_031433.1 · 136,942–137,013 bp · −
ycf15 · NC_031433.1 · 143,351–143,500 bp · −
ycf2 · NC_031433.1 · 143,642–150,496 bp · −
psbK · NC_031433.1 · 7,745–7,930 bp · +
psbI · NC_031433.1 · 8,287–8,397 bp · +
tRNA-Gly (UCC) · NC_031433.1 · 9,272–10,033 bp · +
tRNA-Arg (UCU) · NC_031433.1 · 10,228–10,302 bp · +
tRNA-Cys (GCA) · NC_031433.1 · 28,539–28,609 bp · +
petN · NC_031433.1 · 28,828–28,917 bp · +
tRNA-Thr (GGU) · NC_031433.1 · 31,479–31,550 bp · +
psbD · NC_031433.1 · 32,680–33,741 bp · +
psbC · NC_031433.1 · 33,689–35,110 bp · +
psbZ · NC_031433.1 · 35,741–35,929 bp · +
tRNA-Gly (GCC) · NC_031433.1 · 36,195–36,265 bp · +
tRNA-Ser (GGA) · NC_031433.1 · 45,159–45,245 bp · +
tRNA-Leu (UAA) · NC_031433.1 · 47,184–47,755 bp · +
tRNA-Phe (GAA) · NC_031433.1 · 48,056–48,128 bp · +
tRNA-Met (CAU) · NC_031433.1 · 52,320–52,392 bp · +
rbcL · NC_031433.1 · 55,295–56,755 bp · +
accD · NC_031433.1 · 57,494–58,984 bp · +
psaI · NC_031433.1 · 59,694–59,804 bp · +
ycf4 · NC_031433.1 · 60,242–60,796 bp · +
cemA · NC_031433.1 · 61,347–62,036 bp · +
petA · NC_031433.1 · 62,248–63,210 bp · +
petL · NC_031433.1 · 65,858–65,953 bp · +
petG · NC_031433.1 · 66,129–66,242 bp · +
psaJ · NC_031433.1 · 66,937–67,071 bp · +
rpl33 · NC_031433.1 · 67,531–67,731 bp · +
rps18 · NC_031433.1 · 67,911–68,216 bp · +
rps12 · NC_031433.1 · 138,657–139,450 bp · +
psbB · NC_031433.1 · 72,229–73,755 bp · +
psbT · NC_031433.1 · 73,936–74,043 bp · +
psbH · NC_031433.1 · 74,345–74,566 bp · +
petB · NC_031433.1 · 74,691–76,070 bp · +
petD · NC_031433.1 · 76,257–77,495 bp · +
ycf2 · NC_031433.1 · 86,003–92,857 bp · +
ycf15 · NC_031433.1 · 92,999–93,148 bp · +
tRNA-Val (GAC) · NC_031433.1 · 99,486–99,557 bp · +
rrn16 · NC_031433.1 · 99,885–100,274 bp · +
tRNA-Ile (GAU) · NC_031433.1 · 101,565–102,571 bp · +
tRNA-Ala (UGC) · NC_031433.1 · 102,640–103,518 bp · +
rrn23 · NC_031433.1 · 103,702–106,518 bp · +
rrn4.5 · NC_031433.1 · 106,617–106,719 bp · +
rrn5 · NC_031433.1 · 106,971–107,091 bp · +
tRNA-Arg (ACG) · NC_031433.1 · 107,338–107,411 bp · +
ycf1 · NC_031433.1 · 108,385–109,465 bp · +
rpl32 · NC_031433.1 · 112,169–112,339 bp · +
tRNA-Leu (UAG) · NC_031433.1 · 113,054–113,133 bp · +
ccsA · NC_031433.1 · 113,217–114,215 bp · +
tRNA-Asn (GUU) · NC_031433.1 · 128,449–128,520 bp · +
rps7 · NC_031433.1 · 139,504–139,971 bp · +
ndhB · NC_031433.1 · 140,246–142,457 bp · +
tRNA-Leu (CAA) · NC_031433.1 · 143,014–143,094 bp · +
tRNA-His (CAU) · NC_031433.1 · 150,585–150,658 bp · +
rpl23 · NC_031433.1 · 150,824–151,105 bp · +
rpl2 · NC_031433.1 · 151,124–152,611 bp · +
rps19 · NC_031433.1 · 152,666–152,707 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Pogostemon yatabeanus
ANNOTATED PLASTOME
NC_031433.1
152,707 bp · 134 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 38177 76354 114530 152707 bp
Forward strand 5′ → 3′
psbK psbI tRNA-Gly (UCC) tRNA-Arg (UCU) tRNA-Cys (GCA) petN tRNA-Thr (GGU) psbD psbC psbZ tRNA-Gly (GCC) tRNA-Ser (GGA) tRNA-Leu (UAA) tRNA-Phe (GAA) tRNA-Met (CAU) rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 tRNA-Val (GAC) rrn16 tRNA-Ile (GAU) tRNA-Ala (UGC) rrn23 rrn4.5 rrn5 tRNA-Arg (ACG) ycf1 rpl32 tRNA-Leu (UAG) ccsA tRNA-Asn (GUU) rps12 rps7 ndhB tRNA-Leu (CAA) tRNA-His (CAU) rpl23 rpl2 rps19
tRNA-His (GUG) psbA tRNA-Lys (UUU) matK rps16 tRNA-Gln (UUG) tRNA-Ser (GCU) atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM tRNA-Asp (GUC) tRNA-Tyr (GUA) tRNA-Glu (UUC) tRNA-Ser (UGA) tRNA-fM (CAU) rps14 psaB psaA ycf3 rps4 tRNA-Thr (UGU) ndhJ ndhK ndhC tRNA-Val (UAC) atpE atpB psbJ psbL psbF psbE tRNA-Trp (CCA) tRNA-Pro (UGG) rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 tRNA-His (CAU) tRNA-Leu (CAA) ndhB rps7 rps12 tRNA-Asn (GUU) ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 tRNA-Arg (ACG) rrn5 rrn4.5 rrn23 tRNA-Ala (UGC) tRNA-Ile (GAU) rrn16 tRNA-Val (GAC) ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
135 local segments
Gene Type Group Strand Start End Length
tRNA-His (GUG) gene − 2 76 75 Locate
psbA gene − 282 1340 1059 Locate
tRNA-Lys (UUU) gene − 1573 4156 2584 Locate
matK gene − 1872 3407 1536 Locate
rps16 gene − 5032 6176 1145 Locate
tRNA-Gln (UUG) gene − 7348 7419 72 Locate
psbK gene + 7745 7930 186 Locate
psbI gene + 8287 8397 111 Locate
tRNA-Ser (GCU) gene − 8524 8611 88 Locate
tRNA-Gly (UCC) gene + 9272 10033 762 Locate
tRNA-Arg (UCU) gene + 10228 10302 75 Locate
atpA gene − 10401 11924 1524 Locate
atpF gene − 12015 13279 1265 Locate
atpH gene − 13649 13894 246 Locate
atpI gene − 14860 15603 744 Locate
rps2 gene − 15817 16527 711 Locate
rpoC2 gene − 16749 20909 4161 Locate
rpoC1 gene − 21064 23894 2831 Locate
rpoB gene − 23921 27133 3213 Locate
tRNA-Cys (GCA) gene + 28539 28609 71 Locate
petN gene + 28828 28917 90 Locate
psbM gene − 29898 30002 105 Locate
tRNA-Asp (GUC) gene − 30509 30582 74 Locate
tRNA-Tyr (GUA) gene − 30692 30775 84 Locate
tRNA-Glu (UUC) gene − 30835 30907 73 Locate
tRNA-Thr (GGU) gene + 31479 31550 72 Locate
psbD gene + 32680 33741 1062 Locate
psbC gene + 33689 35110 1422 Locate
tRNA-Ser (UGA) gene − 35346 35438 93 Locate
psbZ gene + 35741 35929 189 Locate
tRNA-Gly (GCC) gene + 36195 36265 71 Locate
tRNA-fM (CAU) gene − 36420 36493 74 Locate
rps14 gene − 36643 36945 303 Locate
psaB gene − 37073 39277 2205 Locate
psaA gene − 39303 41555 2253 Locate
ycf3 gene − 42297 44258 1962 Locate
tRNA-Ser (GGA) gene + 45159 45245 87 Locate
rps4 gene − 45512 46117 606 Locate
tRNA-Thr (UGU) gene − 46464 46536 73 Locate
tRNA-Leu (UAA) gene + 47184 47755 572 Locate
tRNA-Phe (GAA) gene + 48056 48128 73 Locate
ndhJ gene − 48991 49467 477 Locate
ndhK gene − 49569 50246 678 Locate
ndhC gene − 50302 50664 363 Locate
tRNA-Val (UAC) gene − 51472 52128 657 Locate
tRNA-Met (CAU) gene + 52320 52392 73 Locate
atpE gene − 52617 53018 402 Locate
atpB gene − 53015 54511 1497 Locate
rbcL gene + 55295 56755 1461 Locate
accD gene + 57494 58984 1491 Locate
psaI gene + 59694 59804 111 Locate
ycf4 gene + 60242 60796 555 Locate
cemA gene + 61347 62036 690 Locate
petA gene + 62248 63210 963 Locate
psbJ gene − 64136 64258 123 Locate
psbL gene − 64401 64517 117 Locate
psbF gene − 64541 64660 120 Locate
psbE gene − 64675 64926 252 Locate
petL gene + 65858 65953 96 Locate
petG gene + 66129 66242 114 Locate
tRNA-Trp (CCA) gene − 66359 66432 74 Locate
tRNA-Pro (UGG) gene − 66599 66672 74 Locate
psaJ gene + 66937 67071 135 Locate
rpl33 gene + 67531 67731 201 Locate
rps18 gene + 67911 68216 306 Locate
rpl20 gene − 68428 68814 387 Locate
rps12 gene − 69579 69692 114 Locate
clpP gene − 69821 71780 1960 Locate
psbB gene + 72229 73755 1527 Locate
psbT gene + 73936 74043 108 Locate
psbN gene − 74110 74241 132 Locate
psbH gene + 74345 74566 222 Locate
petB gene + 74691 76070 1380 Locate
petD gene + 76257 77495 1239 Locate
rpoA gene − 77666 78673 1008 Locate
rps11 gene − 78745 79161 417 Locate
rpl36 gene − 79264 79377 114 Locate
infA gene − 79473 79706 234 Locate
rps8 gene − 79825 80238 414 Locate
rpl14 gene − 80411 80779 369 Locate
rpl16 gene − 80912 82233 1322 Locate
rps3 gene − 82378 83040 663 Locate
rpl22 gene − 83025 83495 471 Locate
rps19 gene − 83555 83833 279 Locate
rpl2 gene − 83888 85375 1488 Locate
rpl23 gene − 85394 85675 282 Locate
tRNA-His (CAU) gene − 85841 85914 74 Locate
ycf2 gene + 86003 92857 6855 Locate
ycf15 gene + 92999 93148 150 Locate
tRNA-Leu (CAA) gene − 93405 93485 81 Locate
ndhB gene − 94042 96253 2212 Locate
rps7 gene − 96528 96995 468 Locate
rps12 gene − 97049 97842 794 Locate
tRNA-Val (GAC) gene + 99486 99557 72 Locate
rrn16 gene + 99885 100274 390 Locate
tRNA-Ile (GAU) gene + 101565 102571 1007 Locate
tRNA-Ala (UGC) gene + 102640 103518 879 Locate
rrn23 gene + 103702 106518 2817 Locate
rrn4.5 gene + 106617 106719 103 Locate
rrn5 gene + 106971 107091 121 Locate
tRNA-Arg (ACG) gene + 107338 107411 74 Locate
tRNA-Asn (GUU) gene − 107979 108050 72 Locate
ycf1 gene + 108385 109465 1081 Locate
ndhF gene − 109449 111665 2217 Locate
rpl32 gene + 112169 112339 171 Locate
tRNA-Leu (UAG) gene + 113054 113133 80 Locate
ccsA gene + 113217 114215 999 Locate
ndhD gene − 114390 115892 1503 Locate
psaC gene − 116009 116254 246 Locate
ndhE gene − 116507 116812 306 Locate
ndhG gene − 117029 117559 531 Locate
ndhI gene − 117873 118379 507 Locate
ndhA gene − 118495 120634 2140 Locate
ndhH gene − 120636 121817 1182 Locate
rps15 gene − 121928 122200 273 Locate
ycf1 gene − 122586 128114 5529 Locate
tRNA-Asn (GUU) gene + 128449 128520 72 Locate
tRNA-Arg (ACG) gene − 129088 129161 74 Locate
rrn5 gene − 129408 129528 121 Locate
rrn4.5 gene − 129780 129882 103 Locate
rrn23 gene − 129981 132797 2817 Locate
tRNA-Ala (UGC) gene − 132981 133859 879 Locate
tRNA-Ile (GAU) gene − 133928 134934 1007 Locate
rrn16 gene − 136225 136614 390 Locate
tRNA-Val (GAC) gene − 136942 137013 72 Locate
rps12 gene + 138657 139450 794 Locate
rps7 gene + 139504 139971 468 Locate
ndhB gene + 140246 142457 2212 Locate
tRNA-Leu (CAA) gene + 143014 143094 81 Locate
ycf15 gene − 143351 143500 150 Locate
ycf2 gene − 143642 150496 6855 Locate
tRNA-His (CAU) gene + 150585 150658 74 Locate
rpl23 gene + 150824 151105 282 Locate
rpl2 gene + 151124 152611 1488 Locate
rps19 gene + 152666 152707 42 Locate
Status Available
Accession NC_031433.1
Length 152,707 bp
GC content 38.2%
Annotated genes 134
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 15 Ribosomal Protein 27 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 0
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources