Coordinate-aware organelle record

Pogostemon yatabeanus chloroplast genome

Available NC_031433.1 152,707 bp 134 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

134 features

Gene	Type	Group	Strand	Start	End	Length
tRNA-His (GUG)	gene	translation-rna	−	1	76	75
psbA	gene	photosystem-ii	−	281	1340	1059
tRNA-Lys (UUU)	gene	translation-rna	−	1572	4156	2584
matK	gene	other	−	1871	3407	1536
rps16	gene	ribosomal-protein	−	5031	6176	1145
tRNA-Gln (UUG)	gene	translation-rna	−	7347	7419	72
psbK	gene	photosystem-ii	+	7744	7930	186
psbI	gene	photosystem-ii	+	8286	8397	111
tRNA-Ser (GCU)	gene	translation-rna	−	8523	8611	88
tRNA-Gly (UCC)	gene	translation-rna	+	9271	10033	762
tRNA-Arg (UCU)	gene	translation-rna	+	10227	10302	75
atpA	gene	atp-synthase	−	10400	11924	1524
atpF	gene	atp-synthase	−	12014	13279	1265
atpH	gene	atp-synthase	−	13648	13894	246
atpI	gene	atp-synthase	−	14859	15603	744
rps2	gene	ribosomal-protein	−	15816	16527	711
rpoC2	gene	rna-polymerase	−	16748	20909	4161
rpoC1	gene	rna-polymerase	−	21063	23894	2831
rpoB	gene	rna-polymerase	−	23920	27133	3213
tRNA-Cys (GCA)	gene	translation-rna	+	28538	28609	71
petN	gene	cytochrome	+	28827	28917	90
psbM	gene	photosystem-ii	−	29897	30002	105
tRNA-Asp (GUC)	gene	translation-rna	−	30508	30582	74
tRNA-Tyr (GUA)	gene	translation-rna	−	30691	30775	84
tRNA-Glu (UUC)	gene	translation-rna	−	30834	30907	73
tRNA-Thr (GGU)	gene	translation-rna	+	31478	31550	72
psbD	gene	photosystem-ii	+	32679	33741	1062
psbC	gene	photosystem-ii	+	33688	35110	1422
tRNA-Ser (UGA)	gene	translation-rna	−	35345	35438	93
psbZ	gene	photosystem-ii	+	35740	35929	189
tRNA-Gly (GCC)	gene	translation-rna	+	36194	36265	71
tRNA-fM (CAU)	gene	translation-rna	−	36419	36493	74
rps14	gene	ribosomal-protein	−	36642	36945	303
psaB	gene	photosystem-i	−	37072	39277	2205
psaA	gene	photosystem-i	−	39302	41555	2253
ycf3	gene	other	−	42296	44258	1962
tRNA-Ser (GGA)	gene	translation-rna	+	45158	45245	87
rps4	gene	ribosomal-protein	−	45511	46117	606
tRNA-Thr (UGU)	gene	translation-rna	−	46463	46536	73
tRNA-Leu (UAA)	gene	translation-rna	+	47183	47755	572
tRNA-Phe (GAA)	gene	translation-rna	+	48055	48128	73
ndhJ	gene	nad-dehydrogenase	−	48990	49467	477
ndhK	gene	nad-dehydrogenase	−	49568	50246	678
ndhC	gene	nad-dehydrogenase	−	50301	50664	363
tRNA-Val (UAC)	gene	translation-rna	−	51471	52128	657
tRNA-Met (CAU)	gene	translation-rna	+	52319	52392	73
atpE	gene	atp-synthase	−	52616	53018	402
atpB	gene	atp-synthase	−	53014	54511	1497
rbcL	gene	other	+	55294	56755	1461
accD	gene	other	+	57493	58984	1491
psaI	gene	photosystem-i	+	59693	59804	111
ycf4	gene	other	+	60241	60796	555
cemA	gene	other	+	61346	62036	690
petA	gene	cytochrome	+	62247	63210	963
psbJ	gene	photosystem-ii	−	64135	64258	123
psbL	gene	photosystem-ii	−	64400	64517	117
psbF	gene	photosystem-ii	−	64540	64660	120
psbE	gene	photosystem-ii	−	64674	64926	252
petL	gene	cytochrome	+	65857	65953	96
petG	gene	cytochrome	+	66128	66242	114
tRNA-Trp (CCA)	gene	translation-rna	−	66358	66432	74
tRNA-Pro (UGG)	gene	translation-rna	−	66598	66672	74
psaJ	gene	photosystem-i	+	66936	67071	135
rpl33	gene	ribosomal-protein	+	67530	67731	201
rps18	gene	ribosomal-protein	+	67910	68216	306
rpl20	gene	ribosomal-protein	−	68427	68814	387
rps12	gene	ribosomal-protein	−	69578	97842	28264
rps12	gene	ribosomal-protein	+	69578	139450	69872
clpP	gene	other	−	69820	71780	1960
psbB	gene	photosystem-ii	+	72228	73755	1527
psbT	gene	photosystem-ii	+	73935	74043	108
psbN	gene	photosystem-ii	−	74109	74241	132
psbH	gene	photosystem-ii	+	74344	74566	222
petB	gene	cytochrome	+	74690	76070	1380
petD	gene	cytochrome	+	76256	77495	1239
rpoA	gene	rna-polymerase	−	77665	78673	1008
rps11	gene	ribosomal-protein	−	78744	79161	417
rpl36	gene	ribosomal-protein	−	79263	79377	114
infA	gene	other	−	79472	79706	234
rps8	gene	ribosomal-protein	−	79824	80238	414
rpl14	gene	ribosomal-protein	−	80410	80779	369
rpl16	gene	ribosomal-protein	−	80911	82233	1322
rps3	gene	ribosomal-protein	−	82377	83040	663
rpl22	gene	ribosomal-protein	−	83024	83495	471
rps19	gene	ribosomal-protein	−	83554	83833	279
rpl2	gene	ribosomal-protein	−	83887	85375	1488
rpl23	gene	ribosomal-protein	−	85393	85675	282
tRNA-His (CAU)	gene	translation-rna	−	85840	85914	74
ycf2	gene	other	+	86002	92857	6855
ycf15	gene	other	+	92998	93148	150
tRNA-Leu (CAA)	gene	translation-rna	−	93404	93485	81
ndhB	gene	nad-dehydrogenase	−	94041	96253	2212
rps7	gene	ribosomal-protein	−	96527	96995	468
tRNA-Val (GAC)	gene	translation-rna	+	99485	99557	72
rrn16	gene	ribosomal-rna	+	99884	100274	390
tRNA-Ile (GAU)	gene	translation-rna	+	101564	102571	1007
tRNA-Ala (UGC)	gene	translation-rna	+	102639	103518	879
rrn23	gene	ribosomal-rna	+	103701	106518	2817
rrn4.5	gene	ribosomal-rna	+	106616	106719	103
rrn5	gene	ribosomal-rna	+	106970	107091	121
tRNA-Arg (ACG)	gene	translation-rna	+	107337	107411	74
tRNA-Asn (GUU)	gene	translation-rna	−	107978	108050	72
ycf1	gene	other	+	108384	109465	1081
ndhF	gene	nad-dehydrogenase	−	109448	111665	2217
rpl32	gene	ribosomal-protein	+	112168	112339	171
tRNA-Leu (UAG)	gene	translation-rna	+	113053	113133	80
ccsA	gene	other	+	113216	114215	999
ndhD	gene	nad-dehydrogenase	−	114389	115892	1503
psaC	gene	photosystem-i	−	116008	116254	246
ndhE	gene	nad-dehydrogenase	−	116506	116812	306
ndhG	gene	nad-dehydrogenase	−	117028	117559	531
ndhI	gene	nad-dehydrogenase	−	117872	118379	507
ndhA	gene	nad-dehydrogenase	−	118494	120634	2140
ndhH	gene	nad-dehydrogenase	−	120635	121817	1182
rps15	gene	ribosomal-protein	−	121927	122200	273
ycf1	gene	other	−	122585	128114	5529
tRNA-Asn (GUU)	gene	translation-rna	+	128448	128520	72
tRNA-Arg (ACG)	gene	translation-rna	−	129087	129161	74
rrn5	gene	ribosomal-rna	−	129407	129528	121
rrn4.5	gene	ribosomal-rna	−	129779	129882	103
rrn23	gene	ribosomal-rna	−	129980	132797	2817
tRNA-Ala (UGC)	gene	translation-rna	−	132980	133859	879
tRNA-Ile (GAU)	gene	translation-rna	−	133927	134934	1007
rrn16	gene	ribosomal-rna	−	136224	136614	390
tRNA-Val (GAC)	gene	translation-rna	−	136941	137013	72
rps7	gene	ribosomal-protein	+	139503	139971	468
ndhB	gene	nad-dehydrogenase	+	140245	142457	2212
tRNA-Leu (CAA)	gene	translation-rna	+	143013	143094	81
ycf15	gene	other	−	143350	143500	150
ycf2	gene	other	−	143641	150496	6855
tRNA-His (CAU)	gene	translation-rna	+	150584	150658	74
rpl23	gene	ribosomal-protein	+	150823	151105	282
rpl2	gene	ribosomal-protein	+	151123	152611	1488
rps19	gene	ribosomal-protein	+	152665	152707	42

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_031433.1DNA · accDNC_031433DNA · atpBNC_031433DNA · matKNC_031433DNA · ndhFNC_031433DNA · psbANC_031433DNA · rbcLNC_031433DNA · rps12NC_031433DNA · ycf1NC_031433