Prunella vulgaris subsp. vulgaris chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · PP272174.1 · 11–84 bp · −
psbA · PP272174.1 · 362–1,420 bp · −
trnK-UUU · PP272174.1 · 1,646–4,219 bp · −
matK · PP272174.1 · 1,962–3,488 bp · −
rps16 · PP272174.1 · 4,767–5,849 bp · −
trnQ-UUG · PP272174.1 · 6,635–6,706 bp · −
trnS-GCU · PP272174.1 · 7,898–7,985 bp · −
atpA · PP272174.1 · 9,781–11,304 bp · −
atpF · PP272174.1 · 11,400–12,649 bp · −
atpH · PP272174.1 · 12,923–13,168 bp · −
atpI · PP272174.1 · 14,204–14,947 bp · −
rps2 · PP272174.1 · 15,179–15,889 bp · −
rpoC2 · PP272174.1 · 16,104–20,297 bp · −
rpoC1 · PP272174.1 · 20,451–23,278 bp · −
rpoB · PP272174.1 · 23,305–26,517 bp · −
psbM · PP272174.1 · 29,026–29,130 bp · −
trnD-GUC · PP272174.1 · 29,643–29,716 bp · −
trnY-GUA · PP272174.1 · 29,827–29,910 bp · −
trnE-UUC · PP272174.1 · 29,982–30,054 bp · −
trnS-UGA · PP272174.1 · 34,709–34,801 bp · −
trnfM-CAU · PP272174.1 · 35,841–35,914 bp · −
rps14 · PP272174.1 · 36,059–36,361 bp · −
psaB · PP272174.1 · 36,483–38,687 bp · −
psaA · PP272174.1 · 38,713–40,965 bp · −
ycf3 · PP272174.1 · 41,844–43,804 bp · −
rps4 · PP272174.1 · 45,015–45,620 bp · −
trnT-UGU · PP272174.1 · 45,972–46,044 bp · −
ndhJ · PP272174.1 · 48,311–48,787 bp · −
ndhK · PP272174.1 · 48,901–49,578 bp · −
ndhC · PP272174.1 · 49,630–49,992 bp · −
trnV-UAC · PP272174.1 · 50,941–51,596 bp · −
atpE · PP272174.1 · 52,054–52,455 bp · −
atpB · PP272174.1 · 52,452–53,912 bp · −
psbJ · PP272174.1 · 63,272–63,394 bp · −
psbL · PP272174.1 · 63,529–63,645 bp · −
psbF · PP272174.1 · 63,669–63,788 bp · −
psbE · PP272174.1 · 63,803–64,054 bp · −
trnW-CCA · PP272174.1 · 65,424–65,497 bp · −
trnP-UGG · PP272174.1 · 65,666–65,739 bp · −
rpl20 · PP272174.1 · 67,446–67,832 bp · −
rps12 · PP272174.1 · 68,632–68,745 bp · −
rps12 · PP272174.1 · 96,001–96,794 bp · −
clpP · PP272174.1 · 68,874–70,779 bp · −
psbN · PP272174.1 · 73,115–73,246 bp · −
rpoA · PP272174.1 · 76,654–77,655 bp · −
rps11 · PP272174.1 · 77,726–78,142 bp · −
rpl36 · PP272174.1 · 78,248–78,361 bp · −
infA · PP272174.1 · 78,457–78,690 bp · −
rps8 · PP272174.1 · 78,818–79,222 bp · −
rpl14 · PP272174.1 · 79,410–79,778 bp · −
rpl16 · PP272174.1 · 79,910–81,138 bp · −
rps3 · PP272174.1 · 81,303–81,965 bp · −
rpl22 · PP272174.1 · 81,950–82,417 bp · −
rps19 · PP272174.1 · 82,481–82,759 bp · −
rpl2 · PP272174.1 · 82,819–84,314 bp · −
rpl23 · PP272174.1 · 84,333–84,614 bp · −
trnI-CAU · PP272174.1 · 84,780–84,853 bp · −
trnL-CAA · PP272174.1 · 92,367–92,447 bp · −
ndhB · PP272174.1 · 93,007–95,214 bp · −
rps7 · PP272174.1 · 95,480–95,947 bp · −
trnN-GUU · PP272174.1 · 106,867–106,938 bp · −
ndhF · PP272174.1 · 108,292–110,523 bp · −
ndhD · PP272174.1 · 113,018–114,547 bp · −
psaC · PP272174.1 · 114,641–114,886 bp · −
ndhE · PP272174.1 · 115,139–115,444 bp · −
ndhG · PP272174.1 · 115,674–116,204 bp · −
ndhI · PP272174.1 · 116,597–117,103 bp · −
ndhA · PP272174.1 · 117,184–119,281 bp · −
ndhH · PP272174.1 · 119,283–120,464 bp · −
rps15 · PP272174.1 · 120,564–120,836 bp · −
ycf1 · PP272174.1 · 121,273–126,819 bp · −
trnR-ACG · PP272174.1 · 127,745–127,818 bp · −
rrn5 · PP272174.1 · 128,062–128,182 bp · −
rrn4.5 · PP272174.1 · 128,443–128,545 bp · −
rrn23 · PP272174.1 · 128,644–131,460 bp · −
trnA-UGC · PP272174.1 · 131,613–132,490 bp · −
trnI-GAU · PP272174.1 · 132,560–133,577 bp · −
rrn16 · PP272174.1 · 133,881–135,371 bp · −
trnV-GAC · PP272174.1 · 135,598–135,669 bp · −
ycf15 · PP272174.1 · 141,910–142,107 bp · −
ycf2 · PP272174.1 · 142,249–149,145 bp · −
psbK · PP272174.1 · 7,119–7,298 bp · +
psbI · PP272174.1 · 7,681–7,791 bp · +
trnG-UCC · PP272174.1 · 8,661–9,417 bp · +
trnR-UCU · PP272174.1 · 9,605–9,676 bp · +
trnC-GCA · PP272174.1 · 27,686–27,756 bp · +
petN · PP272174.1 · 27,912–28,001 bp · +
trnT-GGU · PP272174.1 · 30,615–30,686 bp · +
psbD · PP272174.1 · 32,026–33,087 bp · +
psbC · PP272174.1 · 33,035–34,456 bp · +
psbZ · PP272174.1 · 35,142–35,330 bp · +
trnG-GCC · PP272174.1 · 35,609–35,679 bp · +
trnS-GGA · PP272174.1 · 44,647–44,733 bp · +
trnL-UAA · PP272174.1 · 46,721–47,305 bp · +
trnF-GAA · PP272174.1 · 47,600–47,672 bp · +
trnM-CAU · PP272174.1 · 51,777–51,849 bp · +
rbcL · PP272174.1 · 54,723–56,156 bp · +
accD · PP272174.1 · 56,822–58,309 bp · +
psaI · PP272174.1 · 58,789–58,899 bp · +
ycf4 · PP272174.1 · 59,341–59,895 bp · +
cemA · PP272174.1 · 60,356–61,045 bp · +
petA · PP272174.1 · 61,270–62,232 bp · +
petL · PP272174.1 · 64,920–65,015 bp · +
petG · PP272174.1 · 65,201–65,314 bp · +
psaJ · PP272174.1 · 66,019–66,153 bp · +
rpl33 · PP272174.1 · 66,534–66,734 bp · +
rps18 · PP272174.1 · 66,903–67,208 bp · +
rps12 · PP272174.1 · 137,293–138,086 bp · +
psbB · PP272174.1 · 71,230–72,756 bp · +
psbT · PP272174.1 · 72,939–73,040 bp · +
psbH · PP272174.1 · 73,352–73,573 bp · +
petB · PP272174.1 · 73,699–75,067 bp · +
petD · PP272174.1 · 75,255–76,458 bp · +
ycf2 · PP272174.1 · 84,942–91,838 bp · +
ycf15 · PP272174.1 · 91,980–92,177 bp · +
trnV-GAC · PP272174.1 · 98,418–98,489 bp · +
rrn16 · PP272174.1 · 98,716–100,206 bp · +
trnI-GAU · PP272174.1 · 100,510–101,527 bp · +
trnA-UGC · PP272174.1 · 101,597–102,474 bp · +
rrn23 · PP272174.1 · 102,627–105,443 bp · +
rrn4.5 · PP272174.1 · 105,542–105,644 bp · +
rrn5 · PP272174.1 · 105,905–106,025 bp · +
trnR-ACG · PP272174.1 · 106,269–106,342 bp · +
ycf1 · PP272174.1 · 107,268–108,398 bp · +
rpl32 · PP272174.1 · 110,982–111,152 bp · +
trnL-UAG · PP272174.1 · 111,647–111,726 bp · +
ccsA · PP272174.1 · 111,825–112,802 bp · +
trnN-GUU · PP272174.1 · 127,149–127,220 bp · +
rps7 · PP272174.1 · 138,140–138,607 bp · +
ndhB · PP272174.1 · 138,873–141,080 bp · +
trnL-CAA · PP272174.1 · 141,640–141,720 bp · +
trnI-CAU · PP272174.1 · 149,234–149,307 bp · +
rpl23 · PP272174.1 · 149,473–149,754 bp · +
rpl2 · PP272174.1 · 149,773–151,268 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Prunella vulgaris subsp. vulgaris
ANNOTATED PLASTOME
PP272174.1
151,370 bp · 133 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37842 75685 113528 151370 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG ycf1 rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
134 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 11 84 74 Locate
psbA gene − 362 1420 1059 Locate
trnK-UUU gene − 1646 4219 2574 Locate
matK gene − 1962 3488 1527 Locate
rps16 gene − 4767 5849 1083 Locate
trnQ-UUG gene − 6635 6706 72 Locate
psbK gene + 7119 7298 180 Locate
psbI gene + 7681 7791 111 Locate
trnS-GCU gene − 7898 7985 88 Locate
trnG-UCC gene + 8661 9417 757 Locate
trnR-UCU gene + 9605 9676 72 Locate
atpA gene − 9781 11304 1524 Locate
atpF gene − 11400 12649 1250 Locate
atpH gene − 12923 13168 246 Locate
atpI gene − 14204 14947 744 Locate
rps2 gene − 15179 15889 711 Locate
rpoC2 gene − 16104 20297 4194 Locate
rpoC1 gene − 20451 23278 2828 Locate
rpoB gene − 23305 26517 3213 Locate
trnC-GCA gene + 27686 27756 71 Locate
petN gene + 27912 28001 90 Locate
psbM gene − 29026 29130 105 Locate
trnD-GUC gene − 29643 29716 74 Locate
trnY-GUA gene − 29827 29910 84 Locate
trnE-UUC gene − 29982 30054 73 Locate
trnT-GGU gene + 30615 30686 72 Locate
psbD gene + 32026 33087 1062 Locate
psbC gene + 33035 34456 1422 Locate
trnS-UGA gene − 34709 34801 93 Locate
psbZ gene + 35142 35330 189 Locate
trnG-GCC gene + 35609 35679 71 Locate
trnfM-CAU gene − 35841 35914 74 Locate
rps14 gene − 36059 36361 303 Locate
psaB gene − 36483 38687 2205 Locate
psaA gene − 38713 40965 2253 Locate
ycf3 gene − 41844 43804 1961 Locate
trnS-GGA gene + 44647 44733 87 Locate
rps4 gene − 45015 45620 606 Locate
trnT-UGU gene − 45972 46044 73 Locate
trnL-UAA gene + 46721 47305 585 Locate
trnF-GAA gene + 47600 47672 73 Locate
ndhJ gene − 48311 48787 477 Locate
ndhK gene − 48901 49578 678 Locate
ndhC gene − 49630 49992 363 Locate
trnV-UAC gene − 50941 51596 656 Locate
trnM-CAU gene + 51777 51849 73 Locate
atpE gene − 52054 52455 402 Locate
atpB gene − 52452 53912 1461 Locate
rbcL gene + 54723 56156 1434 Locate
accD gene + 56822 58309 1488 Locate
psaI gene + 58789 58899 111 Locate
ycf4 gene + 59341 59895 555 Locate
cemA gene + 60356 61045 690 Locate
petA gene + 61270 62232 963 Locate
psbJ gene − 63272 63394 123 Locate
psbL gene − 63529 63645 117 Locate
psbF gene − 63669 63788 120 Locate
psbE gene − 63803 64054 252 Locate
petL gene + 64920 65015 96 Locate
petG gene + 65201 65314 114 Locate
trnW-CCA gene − 65424 65497 74 Locate
trnP-UGG gene − 65666 65739 74 Locate
psaJ gene + 66019 66153 135 Locate
rpl33 gene + 66534 66734 201 Locate
rps18 gene + 66903 67208 306 Locate
rpl20 gene − 67446 67832 387 Locate
rps12 gene − 68632 68745 114 Locate
clpP gene − 68874 70779 1906 Locate
psbB gene + 71230 72756 1527 Locate
psbT gene + 72939 73040 102 Locate
psbN gene − 73115 73246 132 Locate
psbH gene + 73352 73573 222 Locate
petB gene + 73699 75067 1369 Locate
petD gene + 75255 76458 1204 Locate
rpoA gene − 76654 77655 1002 Locate
rps11 gene − 77726 78142 417 Locate
rpl36 gene − 78248 78361 114 Locate
infA gene − 78457 78690 234 Locate
rps8 gene − 78818 79222 405 Locate
rpl14 gene − 79410 79778 369 Locate
rpl16 gene − 79910 81138 1229 Locate
rps3 gene − 81303 81965 663 Locate
rpl22 gene − 81950 82417 468 Locate
rps19 gene − 82481 82759 279 Locate
rpl2 gene − 82819 84314 1496 Locate
rpl23 gene − 84333 84614 282 Locate
trnI-CAU gene − 84780 84853 74 Locate
ycf2 gene + 84942 91838 6897 Locate
ycf15 gene + 91980 92177 198 Locate
trnL-CAA gene − 92367 92447 81 Locate
ndhB gene − 93007 95214 2208 Locate
rps7 gene − 95480 95947 468 Locate
rps12 gene − 96001 96794 794 Locate
trnV-GAC gene + 98418 98489 72 Locate
rrn16 gene + 98716 100206 1491 Locate
trnI-GAU gene + 100510 101527 1018 Locate
trnA-UGC gene + 101597 102474 878 Locate
rrn23 gene + 102627 105443 2817 Locate
rrn4.5 gene + 105542 105644 103 Locate
rrn5 gene + 105905 106025 121 Locate
trnR-ACG gene + 106269 106342 74 Locate
trnN-GUU gene − 106867 106938 72 Locate
ycf1 gene + 107268 108398 1131 Locate
ndhF gene − 108292 110523 2232 Locate
rpl32 gene + 110982 111152 171 Locate
trnL-UAG gene + 111647 111726 80 Locate
ccsA gene + 111825 112802 978 Locate
ndhD gene − 113018 114547 1530 Locate
psaC gene − 114641 114886 246 Locate
ndhE gene − 115139 115444 306 Locate
ndhG gene − 115674 116204 531 Locate
ndhI gene − 116597 117103 507 Locate
ndhA gene − 117184 119281 2098 Locate
ndhH gene − 119283 120464 1182 Locate
rps15 gene − 120564 120836 273 Locate
ycf1 gene − 121273 126819 5547 Locate
trnN-GUU gene + 127149 127220 72 Locate
trnR-ACG gene − 127745 127818 74 Locate
rrn5 gene − 128062 128182 121 Locate
rrn4.5 gene − 128443 128545 103 Locate
rrn23 gene − 128644 131460 2817 Locate
trnA-UGC gene − 131613 132490 878 Locate
trnI-GAU gene − 132560 133577 1018 Locate
rrn16 gene − 133881 135371 1491 Locate
trnV-GAC gene − 135598 135669 72 Locate
rps12 gene + 137293 138086 794 Locate
rps7 gene + 138140 138607 468 Locate
ndhB gene + 138873 141080 2208 Locate
trnL-CAA gene + 141640 141720 81 Locate
ycf15 gene − 141910 142107 198 Locate
ycf2 gene − 142249 149145 6897 Locate
trnI-CAU gene + 149234 149307 74 Locate
rpl23 gene + 149473 149754 282 Locate
rpl2 gene + 149773 151268 1496 Locate
Status Available
Accession PP272174.1
Length 151,370 bp
GC content 37.9%
Annotated genes 133
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 15 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources