Pseudocaryopteris paniculata chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
trnR-UCU · MN814866.1 · 1,629–1,700 bp · −
trnG-UCC · MN814866.1 · 1,838–2,596 bp · −
psbI · MN814866.1 · 3,461–3,571 bp · −
psbK · MN814866.1 · 3,897–4,082 bp · −
rpl2 · MN814866.1 · 12,141–13,632 bp · −
rpl23 · MN814866.1 · 13,651–13,932 bp · −
trnI-CAU · MN814866.1 · 14,098–14,171 bp · −
trnL-CAA · MN814866.1 · 21,661–21,741 bp · −
ndhB · MN814866.1 · 22,291–24,502 bp · −
rps7 · MN814866.1 · 24,766–25,233 bp · −
rps12 · MN814866.1 · 25,287–26,083 bp · −
rrn16 · MN814866.1 · 27,972–29,461 bp · −
trnN-GUU · MN814866.1 · 36,132–36,203 bp · −
ndhF · MN814866.1 · 37,584–39,824 bp · −
ndhD · MN814866.1 · 42,357–43,859 bp · −
psaC · MN814866.1 · 43,978–44,223 bp · −
ndhE · MN814866.1 · 44,474–44,779 bp · −
ndhG · MN814866.1 · 44,890–45,420 bp · −
ndhI · MN814866.1 · 45,753–46,259 bp · −
ndhH · MN814866.1 · 48,335–49,516 bp · −
rps15 · MN814866.1 · 49,613–49,885 bp · −
ycf1 · MN814866.1 · 50,278–55,773 bp · −
trnR-ACG · MN814866.1 · 56,748–56,821 bp · −
rrn5 · MN814866.1 · 57,062–57,182 bp · −
rrn4.5 · MN814866.1 · 57,412–57,514 bp · −
rrn23 · MN814866.1 · 57,616–60,431 bp · −
trnA-UGC · MN814866.1 · 60,593–61,473 bp · −
trnI-GAU · MN814866.1 · 61,538–62,556 bp · −
rrn16 · MN814866.1 · 62,857–64,346 bp · −
trnV-GAC · MN814866.1 · 64,574–64,645 bp · −
ycf2 · MN814866.1 · 71,246–78,058 bp · −
petD · MN814866.1 · 86,526–87,742 bp · −
petB · MN814866.1 · 87,949–89,315 bp · −
psbH · MN814866.1 · 89,436–89,657 bp · −
psbT · MN814866.1 · 89,955–90,062 bp · −
psbB · MN814866.1 · 90,241–91,767 bp · −
rps18 · MN814866.1 · 95,781–96,086 bp · −
rpl33 · MN814866.1 · 96,269–96,469 bp · −
psaJ · MN814866.1 · 96,935–97,069 bp · −
petG · MN814866.1 · 97,779–97,892 bp · −
petL · MN814866.1 · 98,067–98,162 bp · −
petA · MN814866.1 · 100,774–101,736 bp · −
cemA · MN814866.1 · 101,944–102,633 bp · −
ycf4 · MN814866.1 · 103,280–103,834 bp · −
psaI · MN814866.1 · 104,253–104,363 bp · −
accD · MN814866.1 · 105,073–106,605 bp · −
rbcL · MN814866.1 · 107,267–108,730 bp · −
trnM-CAU · MN814866.1 · 111,566–111,638 bp · −
trnP-GAA · MN814866.1 · 115,689–115,761 bp · −
trnL-UAA · MN814866.1 · 116,064–116,641 bp · −
trnS-GGA · MN814866.1 · 118,653–118,739 bp · −
trnG-GCC · MN814866.1 · 127,178–127,248 bp · −
psbZ · MN814866.1 · 127,523–127,711 bp · −
psbC · MN814866.1 · 128,393–129,814 bp · −
psbD · MN814866.1 · 129,762–130,823 bp · −
trnT-GGU · MN814866.1 · 132,149–132,220 bp · −
petN · MN814866.1 · 134,695–134,784 bp · −
trnC-GCA · MN814866.1 · 135,525–135,595 bp · −
atpA · MN814866.1 · 1–1,524 bp · +
trnS-GCU · MN814866.1 · 3,254–3,341 bp · +
trnQ-UUG · MN814866.1 · 4,434–4,505 bp · +
trnK-UUU · MN814866.1 · 7,763–10,340 bp · +
matK · MN814866.1 · 8,504–10,039 bp · +
psbA · MN814866.1 · 10,573–11,631 bp · +
trnH-GUG · MN814866.1 · 11,971–12,044 bp · +
ycf2 · MN814866.1 · 14,260–21,072 bp · +
rps12 · MN814866.1 · 94,281–94,394 bp · +
trnV-GAC · MN814866.1 · 27,673–27,744 bp · +
trnI-GAU · MN814866.1 · 29,762–30,780 bp · +
trnA-UGC · MN814866.1 · 30,845–31,725 bp · +
rrn23 · MN814866.1 · 31,887–34,702 bp · +
rrn4.5 · MN814866.1 · 34,804–34,906 bp · +
rrn5 · MN814866.1 · 35,136–35,256 bp · +
trnR-ACG · MN814866.1 · 35,497–35,570 bp · +
ycf1 · MN814866.1 · 36,545–37,693 bp · +
rpl32 · MN814866.1 · 40,354–40,530 bp · +
trnL-UAG · MN814866.1 · 40,955–41,034 bp · +
ccsA · MN814866.1 · 41,126–42,097 bp · +
trnN-GUU · MN814866.1 · 56,115–56,186 bp · +
rps12 · MN814866.1 · 66,235–67,031 bp · +
rps7 · MN814866.1 · 67,085–67,552 bp · +
ndhB · MN814866.1 · 67,816–70,027 bp · +
trnL-CAA · MN814866.1 · 70,577–70,657 bp · +
trnI-CAU · MN814866.1 · 78,147–78,220 bp · +
rpl23 · MN814866.1 · 78,386–78,667 bp · +
rpl2 · MN814866.1 · 78,686–80,177 bp · +
rps19 · MN814866.1 · 80,231–80,509 bp · +
rpl22 · MN814866.1 · 80,565–81,032 bp · +
rps3 · MN814866.1 · 81,017–81,667 bp · +
rpl16 · MN814866.1 · 81,826–83,111 bp · +
rpl14 · MN814866.1 · 83,238–83,606 bp · +
rps8 · MN814866.1 · 83,775–84,179 bp · +
infA · MN814866.1 · 84,304–84,537 bp · +
rpl36 · MN814866.1 · 84,633–84,746 bp · +
rps11 · MN814866.1 · 84,848–85,264 bp · +
rpoA · MN814866.1 · 85,336–86,349 bp · +
psbN · MN814866.1 · 89,763–89,894 bp · +
clpP · MN814866.1 · 92,213–94,153 bp · +
rpl20 · MN814866.1 · 95,150–95,515 bp · +
trnP-UGG · MN814866.1 · 97,345–97,418 bp · +
trnW-CCA · MN814866.1 · 97,582–97,655 bp · +
psbE · MN814866.1 · 99,068–99,319 bp · +
psbF · MN814866.1 · 99,334–99,453 bp · +
psbL · MN814866.1 · 99,477–99,593 bp · +
psbJ · MN814866.1 · 99,735–99,857 bp · +
atpB · MN814866.1 · 109,470–110,966 bp · +
atpE · MN814866.1 · 110,963–111,364 bp · +
trnV-UAC · MN814866.1 · 111,819–112,490 bp · +
ndhC · MN814866.1 · 113,367–113,729 bp · +
ndhK · MN814866.1 · 113,783–114,460 bp · +
ndhJ · MN814866.1 · 114,571–115,047 bp · +
trnT-UGU · MN814866.1 · 117,325–117,397 bp · +
rps4 · MN814866.1 · 117,757–118,362 bp · +
ycf3 · MN814866.1 · 119,174–121,112 bp · +
psaA · MN814866.1 · 121,876–124,128 bp · +
psaB · MN814866.1 · 124,154–126,358 bp · +
rps14 · MN814866.1 · 126,481–126,783 bp · +
trnM-CAU · MN814866.1 · 126,922–126,995 bp · +
trnS-UGA · MN814866.1 · 128,041–128,133 bp · +
trnE-UUC · MN814866.1 · 132,764–132,836 bp · +
trnY-GUA · MN814866.1 · 132,896–132,979 bp · +
trnD-GUC · MN814866.1 · 133,088–133,161 bp · +
psbM · MN814866.1 · 133,681–133,785 bp · +
rpoB · MN814866.1 · 136,787–139,999 bp · +
rpoC2 · MN814866.1 · 143,005–147,168 bp · +
rps2 · MN814866.1 · 147,346–148,056 bp · +
atpI · MN814866.1 · 148,271–149,014 bp · +
atpH · MN814866.1 · 150,025–150,270 bp · +
atpF · MN814866.1 · 150,635–151,862 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Pseudocaryopteris paniculata
ANNOTATED PLASTOME
MN814866.1
151,953 bp · 128 genes
Gene function
ATP synthase
Transfer RNA
Photosystem II
Other
Ribosomal protein
NADH dehydrogenase
Ribosomal RNA
Photosystem I
RNA polymerase
Cytochrome
0 37988 75976 113965 151953 bp
Forward strand 5′ → 3′
atpA trnS-GCU trnQ-UUG trnK-UUU matK psbA trnH-GUG ycf2 trnV-GAC trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG ycf1 rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2 rps19 rpl22 rps3 rpl16 rpl14 rps8 infA rpl36 rps11 rpoA psbN clpP rps12 rpl20 trnP-UGG trnW-CCA psbE psbF psbL psbJ atpB atpE trnV-UAC ndhC ndhK ndhJ trnT-UGU rps4 ycf3 psaA psaB rps14 trnM-CAU trnS-UGA trnE-UUC trnY-GUA trnD-GUC psbM rpoB rpoC2 rps2 atpI atpH atpF
trnR-UCU trnG-UCC psbI psbK rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 rrn16 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf2 petD petB psbH psbT psbB rps18 rpl33 psaJ petG petL petA cemA ycf4 psaI accD rbcL trnM-CAU trnP-GAA trnL-UAA trnS-GGA trnG-GCC psbZ psbC psbD trnT-GGU petN trnC-GCA
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
129 local segments
Gene Type Group Strand Start End Length
atpA gene + 1 1524 1524 Locate
trnR-UCU gene − 1629 1700 72 Locate
trnG-UCC gene − 1838 2596 759 Locate
trnS-GCU gene + 3254 3341 88 Locate
psbI gene − 3461 3571 111 Locate
psbK gene − 3897 4082 186 Locate
trnQ-UUG gene + 4434 4505 72 Locate
trnK-UUU gene + 7763 10340 2578 Locate
matK gene + 8504 10039 1536 Locate
psbA gene + 10573 11631 1059 Locate
trnH-GUG gene + 11971 12044 74 Locate
rpl2 gene − 12141 13632 1492 Locate
rpl23 gene − 13651 13932 282 Locate
trnI-CAU gene − 14098 14171 74 Locate
ycf2 gene + 14260 21072 6813 Locate
trnL-CAA gene − 21661 21741 81 Locate
ndhB gene − 22291 24502 2212 Locate
rps7 gene − 24766 25233 468 Locate
rps12 gene − 25287 26083 797 Locate
trnV-GAC gene + 27673 27744 72 Locate
rrn16 gene − 27972 29461 1490 Locate
trnI-GAU gene + 29762 30780 1019 Locate
trnA-UGC gene + 30845 31725 881 Locate
rrn23 gene + 31887 34702 2816 Locate
rrn4.5 gene + 34804 34906 103 Locate
rrn5 gene + 35136 35256 121 Locate
trnR-ACG gene + 35497 35570 74 Locate
trnN-GUU gene − 36132 36203 72 Locate
ycf1 gene + 36545 37693 1149 Locate
ndhF gene − 37584 39824 2241 Locate
rpl32 gene + 40354 40530 177 Locate
trnL-UAG gene + 40955 41034 80 Locate
ccsA gene + 41126 42097 972 Locate
ndhD gene − 42357 43859 1503 Locate
psaC gene − 43978 44223 246 Locate
ndhE gene − 44474 44779 306 Locate
ndhG gene − 44890 45420 531 Locate
ndhI gene − 45753 46259 507 Locate
ndhH gene − 48335 49516 1182 Locate
rps15 gene − 49613 49885 273 Locate
ycf1 gene − 50278 55773 5496 Locate
trnN-GUU gene + 56115 56186 72 Locate
trnR-ACG gene − 56748 56821 74 Locate
rrn5 gene − 57062 57182 121 Locate
rrn4.5 gene − 57412 57514 103 Locate
rrn23 gene − 57616 60431 2816 Locate
trnA-UGC gene − 60593 61473 881 Locate
trnI-GAU gene − 61538 62556 1019 Locate
rrn16 gene − 62857 64346 1490 Locate
trnV-GAC gene − 64574 64645 72 Locate
rps12 gene + 66235 67031 797 Locate
rps7 gene + 67085 67552 468 Locate
ndhB gene + 67816 70027 2212 Locate
trnL-CAA gene + 70577 70657 81 Locate
ycf2 gene − 71246 78058 6813 Locate
trnI-CAU gene + 78147 78220 74 Locate
rpl23 gene + 78386 78667 282 Locate
rpl2 gene + 78686 80177 1492 Locate
rps19 gene + 80231 80509 279 Locate
rpl22 gene + 80565 81032 468 Locate
rps3 gene + 81017 81667 651 Locate
rpl16 gene + 81826 83111 1286 Locate
rpl14 gene + 83238 83606 369 Locate
rps8 gene + 83775 84179 405 Locate
infA gene + 84304 84537 234 Locate
rpl36 gene + 84633 84746 114 Locate
rps11 gene + 84848 85264 417 Locate
rpoA gene + 85336 86349 1014 Locate
petD gene − 86526 87742 1217 Locate
petB gene − 87949 89315 1367 Locate
psbH gene − 89436 89657 222 Locate
psbN gene + 89763 89894 132 Locate
psbT gene − 89955 90062 108 Locate
psbB gene − 90241 91767 1527 Locate
clpP gene + 92213 94153 1941 Locate
rps12 gene + 94281 94394 114 Locate
rpl20 gene + 95150 95515 366 Locate
rps18 gene − 95781 96086 306 Locate
rpl33 gene − 96269 96469 201 Locate
psaJ gene − 96935 97069 135 Locate
trnP-UGG gene + 97345 97418 74 Locate
trnW-CCA gene + 97582 97655 74 Locate
petG gene − 97779 97892 114 Locate
petL gene − 98067 98162 96 Locate
psbE gene + 99068 99319 252 Locate
psbF gene + 99334 99453 120 Locate
psbL gene + 99477 99593 117 Locate
psbJ gene + 99735 99857 123 Locate
petA gene − 100774 101736 963 Locate
cemA gene − 101944 102633 690 Locate
ycf4 gene − 103280 103834 555 Locate
psaI gene − 104253 104363 111 Locate
accD gene − 105073 106605 1533 Locate
rbcL gene − 107267 108730 1464 Locate
atpB gene + 109470 110966 1497 Locate
atpE gene + 110963 111364 402 Locate
trnM-CAU gene − 111566 111638 73 Locate
trnV-UAC gene + 111819 112490 672 Locate
ndhC gene + 113367 113729 363 Locate
ndhK gene + 113783 114460 678 Locate
ndhJ gene + 114571 115047 477 Locate
trnP-GAA gene − 115689 115761 73 Locate
trnL-UAA gene − 116064 116641 578 Locate
trnT-UGU gene + 117325 117397 73 Locate
rps4 gene + 117757 118362 606 Locate
trnS-GGA gene − 118653 118739 87 Locate
ycf3 gene + 119174 121112 1939 Locate
psaA gene + 121876 124128 2253 Locate
psaB gene + 124154 126358 2205 Locate
rps14 gene + 126481 126783 303 Locate
trnM-CAU gene + 126922 126995 74 Locate
trnG-GCC gene − 127178 127248 71 Locate
psbZ gene − 127523 127711 189 Locate
trnS-UGA gene + 128041 128133 93 Locate
psbC gene − 128393 129814 1422 Locate
psbD gene − 129762 130823 1062 Locate
trnT-GGU gene − 132149 132220 72 Locate
trnE-UUC gene + 132764 132836 73 Locate
trnY-GUA gene + 132896 132979 84 Locate
trnD-GUC gene + 133088 133161 74 Locate
psbM gene + 133681 133785 105 Locate
petN gene − 134695 134784 90 Locate
trnC-GCA gene − 135525 135595 71 Locate
rpoB gene + 136787 139999 3213 Locate
rpoC2 gene + 143005 147168 4164 Locate
rps2 gene + 147346 148056 711 Locate
atpI gene + 148271 149014 744 Locate
atpH gene + 150025 150270 246 Locate
atpF gene + 150635 151862 1228 Locate
Status Available
Accession MN814866.1
Length 151,953 bp
GC content 38.4%
Annotated genes 128
Gene sequence records 8
Atp Synthase 6 Translation Rna 37 Photosystem Ii 15 Other 13 Ribosomal Protein 25 Nad Dehydrogenase 11 Ribosomal Rna 8 Photosystem I 5 Rna Polymerase 3 Cytochrome 6
SSR 0
Direct 0
Inverted 0
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources