Coordinate-aware organelle record

Pseudocaryopteris paniculata chloroplast genome

Available MN814866.1 151,953 bp 128 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

128 features

Gene	Type	Group	Strand	Start	End	Length
atpA	gene	atp-synthase	+	0	1524	1524
trnR-UCU	gene	translation-rna	−	1628	1700	72
trnG-UCC	gene	translation-rna	−	1837	2596	759
trnS-GCU	gene	translation-rna	+	3253	3341	88
psbI	gene	photosystem-ii	−	3460	3571	111
psbK	gene	photosystem-ii	−	3896	4082	186
trnQ-UUG	gene	translation-rna	+	4433	4505	72
trnK-UUU	gene	translation-rna	+	7762	10340	2578
matK	gene	other	+	8503	10039	1536
psbA	gene	photosystem-ii	+	10572	11631	1059
trnH-GUG	gene	translation-rna	+	11970	12044	74
rpl2	gene	ribosomal-protein	−	12140	13632	1492
rpl23	gene	ribosomal-protein	−	13650	13932	282
trnI-CAU	gene	translation-rna	−	14097	14171	74
ycf2	gene	other	+	14259	21072	6813
trnL-CAA	gene	translation-rna	−	21660	21741	81
ndhB	gene	nad-dehydrogenase	−	22290	24502	2212
rps7	gene	ribosomal-protein	−	24765	25233	468
rps12	gene	ribosomal-protein	+	25286	94394	69108
trnV-GAC	gene	translation-rna	+	27672	27744	72
rrn16	gene	ribosomal-rna	−	27971	29461	1490
trnI-GAU	gene	translation-rna	+	29761	30780	1019
trnA-UGC	gene	translation-rna	+	30844	31725	881
rrn23	gene	ribosomal-rna	+	31886	34702	2816
rrn4.5	gene	ribosomal-rna	+	34803	34906	103
rrn5	gene	ribosomal-rna	+	35135	35256	121
trnR-ACG	gene	translation-rna	+	35496	35570	74
trnN-GUU	gene	translation-rna	−	36131	36203	72
ycf1	gene	other	+	36544	37693	1149
ndhF	gene	nad-dehydrogenase	−	37583	39824	2241
rpl32	gene	ribosomal-protein	+	40353	40530	177
trnL-UAG	gene	translation-rna	+	40954	41034	80
ccsA	gene	other	+	41125	42097	972
ndhD	gene	nad-dehydrogenase	−	42356	43859	1503
psaC	gene	photosystem-i	−	43977	44223	246
ndhE	gene	nad-dehydrogenase	−	44473	44779	306
ndhG	gene	nad-dehydrogenase	−	44889	45420	531
ndhI	gene	nad-dehydrogenase	−	45752	46259	507
ndhH	gene	nad-dehydrogenase	−	48334	49516	1182
rps15	gene	ribosomal-protein	−	49612	49885	273
ycf1	gene	other	−	50277	55773	5496
trnN-GUU	gene	translation-rna	+	56114	56186	72
trnR-ACG	gene	translation-rna	−	56747	56821	74
rrn5	gene	ribosomal-rna	−	57061	57182	121
rrn4.5	gene	ribosomal-rna	−	57411	57514	103
rrn23	gene	ribosomal-rna	−	57615	60431	2816
trnA-UGC	gene	translation-rna	−	60592	61473	881
trnI-GAU	gene	translation-rna	−	61537	62556	1019
rrn16	gene	ribosomal-rna	−	62856	64346	1490
trnV-GAC	gene	translation-rna	−	64573	64645	72
rps12	gene	ribosomal-protein	+	66234	94394	28160
rps7	gene	ribosomal-protein	+	67084	67552	468
ndhB	gene	nad-dehydrogenase	+	67815	70027	2212
trnL-CAA	gene	translation-rna	+	70576	70657	81
ycf2	gene	other	−	71245	78058	6813
trnI-CAU	gene	translation-rna	+	78146	78220	74
rpl23	gene	ribosomal-protein	+	78385	78667	282
rpl2	gene	ribosomal-protein	+	78685	80177	1492
rps19	gene	ribosomal-protein	+	80230	80509	279
rpl22	gene	ribosomal-protein	+	80564	81032	468
rps3	gene	ribosomal-protein	+	81016	81667	651
rpl16	gene	ribosomal-protein	+	81825	83111	1286
rpl14	gene	ribosomal-protein	+	83237	83606	369
rps8	gene	ribosomal-protein	+	83774	84179	405
infA	gene	other	+	84303	84537	234
rpl36	gene	ribosomal-protein	+	84632	84746	114
rps11	gene	ribosomal-protein	+	84847	85264	417
rpoA	gene	rna-polymerase	+	85335	86349	1014
petD	gene	cytochrome	−	86525	87742	1217
petB	gene	cytochrome	−	87948	89315	1367
psbH	gene	photosystem-ii	−	89435	89657	222
psbN	gene	photosystem-ii	+	89762	89894	132
psbT	gene	photosystem-ii	−	89954	90062	108
psbB	gene	photosystem-ii	−	90240	91767	1527
clpP	gene	other	+	92212	94153	1941
rpl20	gene	ribosomal-protein	+	95149	95515	366
rps18	gene	ribosomal-protein	−	95780	96086	306
rpl33	gene	ribosomal-protein	−	96268	96469	201
psaJ	gene	photosystem-i	−	96934	97069	135
trnP-UGG	gene	translation-rna	+	97344	97418	74
trnW-CCA	gene	translation-rna	+	97581	97655	74
petG	gene	cytochrome	−	97778	97892	114
petL	gene	cytochrome	−	98066	98162	96
psbE	gene	photosystem-ii	+	99067	99319	252
psbF	gene	photosystem-ii	+	99333	99453	120
psbL	gene	photosystem-ii	+	99476	99593	117
psbJ	gene	photosystem-ii	+	99734	99857	123
petA	gene	cytochrome	−	100773	101736	963
cemA	gene	other	−	101943	102633	690
ycf4	gene	other	−	103279	103834	555
psaI	gene	photosystem-i	−	104252	104363	111
accD	gene	other	−	105072	106605	1533
rbcL	gene	other	−	107266	108730	1464
atpB	gene	atp-synthase	+	109469	110966	1497
atpE	gene	atp-synthase	+	110962	111364	402
trnM-CAU	gene	translation-rna	−	111565	111638	73
trnV-UAC	gene	translation-rna	+	111818	112490	672
ndhC	gene	nad-dehydrogenase	+	113366	113729	363
ndhK	gene	nad-dehydrogenase	+	113782	114460	678
ndhJ	gene	nad-dehydrogenase	+	114570	115047	477
trnP-GAA	gene	translation-rna	−	115688	115761	73
trnL-UAA	gene	translation-rna	−	116063	116641	578
trnT-UGU	gene	translation-rna	+	117324	117397	73
rps4	gene	ribosomal-protein	+	117756	118362	606
trnS-GGA	gene	translation-rna	−	118652	118739	87
ycf3	gene	other	+	119173	121112	1939
psaA	gene	photosystem-i	+	121875	124128	2253
psaB	gene	photosystem-i	+	124153	126358	2205
rps14	gene	ribosomal-protein	+	126480	126783	303
trnM-CAU	gene	translation-rna	+	126921	126995	74
trnG-GCC	gene	translation-rna	−	127177	127248	71
psbZ	gene	photosystem-ii	−	127522	127711	189
trnS-UGA	gene	translation-rna	+	128040	128133	93
psbC	gene	photosystem-ii	−	128392	129814	1422
psbD	gene	photosystem-ii	−	129761	130823	1062
trnT-GGU	gene	translation-rna	−	132148	132220	72
trnE-UUC	gene	translation-rna	+	132763	132836	73
trnY-GUA	gene	translation-rna	+	132895	132979	84
trnD-GUC	gene	translation-rna	+	133087	133161	74
psbM	gene	photosystem-ii	+	133680	133785	105
petN	gene	cytochrome	−	134694	134784	90
trnC-GCA	gene	translation-rna	−	135524	135595	71
rpoB	gene	rna-polymerase	+	136786	139999	3213
rpoC2	gene	rna-polymerase	+	143004	147168	4164
rps2	gene	ribosomal-protein	+	147345	148056	711
atpI	gene	atp-synthase	+	148270	149014	744
atpH	gene	atp-synthase	+	150024	150270	246
atpF	gene	atp-synthase	+	150634	151862	1228

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeMN814866.1DNA · accDMN814866DNA · atpBMN814866DNA · matKMN814866DNA · ndhFMN814866DNA · psbAMN814866DNA · rbcLMN814866DNA · rps12MN814866DNA · ycf1MN814866