Coordinate-aware organelle record

Rotheca serrata chloroplast genome

Available MN814867.1 150,371 bp 130 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

130 features

Gene	Type	Group	Strand	Start	End	Length
atpA	gene	atp-synthase	+	0	1524	1524
trnR-UCU	gene	translation-rna	−	1633	1705	72
trnG-UCC	gene	translation-rna	−	1878	2641	763
trnS-GCU	gene	translation-rna	+	3328	3416	88
psbI	gene	photosystem-ii	−	3508	3619	111
psbK	gene	photosystem-ii	−	4009	4195	186
trnQ-UUG	gene	translation-rna	+	4524	4596	72
trnK-UUU	gene	translation-rna	+	7541	10130	2589
matK	gene	other	+	8292	9828	1536
psbA	gene	photosystem-ii	+	10372	11431	1059
trnH-GUG	gene	translation-rna	+	11895	11969	74
rpl2	gene	ribosomal-protein	−	12051	13528	1477
rpl23	gene	ribosomal-protein	−	13546	13828	282
trnI-CAU	gene	translation-rna	−	13993	14067	74
ycf2	gene	other	+	14161	20392	6231
trnL-CAA	gene	translation-rna	−	20998	21079	81
ndhB	gene	nad-dehydrogenase	−	21527	23740	2213
rps7	gene	ribosomal-protein	−	24015	24483	468
rps12	gene	ribosomal-protein	+	24536	92994	68458
trnV-GAC	gene	translation-rna	+	26887	26959	72
rrn16	gene	ribosomal-rna	−	27185	28675	1490
trnI-GAU	gene	translation-rna	+	28974	29976	1002
trnA-UGC	gene	translation-rna	+	30040	30912	872
rrn23	gene	ribosomal-rna	+	31070	33878	2808
rrn4.5	gene	ribosomal-rna	+	33979	34082	103
rrn5	gene	ribosomal-rna	+	34334	34455	121
trnR-ACG	gene	translation-rna	+	34691	34765	74
trnN-GUU	gene	translation-rna	−	35315	35387	72
ycf1	gene	other	+	35716	36811	1095
ndhF	gene	nad-dehydrogenase	−	36797	39017	2220
rpl32	gene	ribosomal-protein	+	39514	39691	177
trnL-UAG	gene	translation-rna	+	40030	40110	80
ccsA	gene	other	+	40194	41166	972
ndhD	gene	nad-dehydrogenase	−	41381	42884	1503
psaC	gene	photosystem-i	−	43003	43249	246
ndhE	gene	nad-dehydrogenase	−	43499	43805	306
ndhG	gene	nad-dehydrogenase	−	44005	44536	531
ndhI	gene	nad-dehydrogenase	−	44888	45395	507
ndhA	gene	nad-dehydrogenase	−	45475	47550	2075
ndhH	gene	nad-dehydrogenase	−	47551	48733	1182
rps15	gene	ribosomal-protein	−	48837	49110	273
ycf1	gene	other	−	49502	55079	5577
trnN-GUU	gene	translation-rna	+	55408	55480	72
trnR-ACG	gene	translation-rna	−	56030	56104	74
rrn5	gene	ribosomal-rna	−	56340	56461	121
rrn4.5	gene	ribosomal-rna	−	56713	56816	103
rrn23	gene	ribosomal-rna	−	56917	59725	2808
trnA-UGC	gene	translation-rna	−	59883	60755	872
trnI-GAU	gene	translation-rna	−	60819	61821	1002
rrn16	gene	ribosomal-rna	−	62120	63610	1490
trnV-GAC	gene	translation-rna	−	63836	63908	72
rps12	gene	ribosomal-protein	+	65462	92994	27532
rps7	gene	ribosomal-protein	+	66312	66780	468
ndhB	gene	nad-dehydrogenase	+	67055	69268	2213
trnL-CAA	gene	translation-rna	+	69716	69797	81
ycf2	gene	other	−	70403	76634	6231
trnI-CAU	gene	translation-rna	+	76728	76802	74
rpl23	gene	ribosomal-protein	+	76967	77249	282
rpl2	gene	ribosomal-protein	+	77267	78744	1477
rps19	gene	ribosomal-protein	+	78788	79067	279
rpl22	gene	ribosomal-protein	+	79113	79578	465
rps3	gene	ribosomal-protein	+	79562	80231	669
rpl16	gene	ribosomal-protein	+	80389	81635	1246
rpl14	gene	ribosomal-protein	+	81760	82129	369
rps8	gene	ribosomal-protein	+	82353	82758	405
infA	gene	other	+	82879	83113	234
rpl36	gene	ribosomal-protein	+	83207	83321	114
rps11	gene	ribosomal-protein	+	83422	83839	417
rpoA	gene	rna-polymerase	+	83910	84924	1014
petD	gene	cytochrome	−	85087	86327	1240
petB	gene	cytochrome	−	86538	87896	1358
psbH	gene	photosystem-ii	−	88020	88242	222
psbN	gene	photosystem-ii	+	88352	88484	132
psbT	gene	photosystem-ii	−	88544	88652	108
psbB	gene	photosystem-ii	−	88832	90359	1527
clpP	gene	other	+	90800	92750	1950
rpl20	gene	ribosomal-protein	+	93816	94203	387
rps18	gene	ribosomal-protein	−	94438	94744	306
rpl33	gene	ribosomal-protein	−	94920	95121	201
psaJ	gene	photosystem-i	−	95581	95716	135
trnP-UGG	gene	translation-rna	+	95999	96073	74
trnW-CCA	gene	translation-rna	+	96235	96309	74
petG	gene	cytochrome	−	96420	96534	114
petL	gene	cytochrome	−	96715	96811	96
psbE	gene	photosystem-ii	+	97655	97907	252
psbF	gene	photosystem-ii	+	97921	98041	120
psbL	gene	photosystem-ii	+	98064	98181	117
psbJ	gene	photosystem-ii	+	98314	98437	123
petA	gene	cytochrome	−	99403	100366	963
cemA	gene	other	−	100569	101259	690
ycf4	gene	other	−	101911	102466	555
psaI	gene	photosystem-i	−	102896	103007	111
accD	gene	other	−	103677	105195	1518
rbcL	gene	other	−	105850	107284	1434
atpB	gene	atp-synthase	+	108067	109564	1497
atpE	gene	atp-synthase	+	109560	109962	402
trnM-CAU	gene	translation-rna	−	110178	110251	73
trnV-UAC	gene	translation-rna	+	110426	111090	664
ndhC	gene	nad-dehydrogenase	+	111958	112321	363
ndhK	gene	nad-dehydrogenase	+	112374	113031	657
ndhJ	gene	nad-dehydrogenase	+	113143	113620	477
trnP-GAA	gene	translation-rna	−	114233	114306	73
trnL-UAA	gene	translation-rna	−	114616	115179	563
trnT-UGU	gene	translation-rna	+	115855	115928	73
rps4	gene	ribosomal-protein	+	116209	116815	606
trnS-GGA	gene	translation-rna	−	117091	117178	87
ycf3	gene	other	+	117791	119753	1962
psaA	gene	photosystem-i	+	120473	122726	2253
psaB	gene	photosystem-i	+	122751	124956	2205
rps14	gene	ribosomal-protein	+	125084	125387	303
trnM-CAU	gene	translation-rna	+	125536	125610	74
trnG-GCC	gene	translation-rna	−	125735	125806	71
psbZ	gene	photosystem-ii	−	126080	126269	189
trnS-UGA	gene	translation-rna	+	126588	126681	93
psbC	gene	photosystem-ii	−	126924	128346	1422
psbD	gene	photosystem-ii	−	128293	129355	1062
trnT-GGU	gene	translation-rna	−	130716	130788	72
trnE-UUC	gene	translation-rna	+	131318	131391	73
trnY-GUA	gene	translation-rna	+	131450	131534	84
trnD-GUC	gene	translation-rna	+	131641	131715	74
psbM	gene	photosystem-ii	+	132239	132344	105
petN	gene	cytochrome	−	132983	133073	90
trnC-GCA	gene	translation-rna	−	133892	133963	71
rpoB	gene	rna-polymerase	+	135111	138315	3204
rpoC1	gene	rna-polymerase	+	138344	141183	2839
rpoC2	gene	rna-polymerase	+	141349	145531	4182
rps2	gene	ribosomal-protein	+	145743	146454	711
atpI	gene	atp-synthase	+	146699	147443	744
atpH	gene	atp-synthase	+	148419	148665	246
atpF	gene	atp-synthase	+	149039	150286	1247

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeMN814867.1DNA · accDMN814867DNA · atpBMN814867DNA · matKMN814867DNA · ndhFMN814867DNA · psbAMN814867DNA · rbcLMN814867DNA · rps12MN814867DNA · ycf1MN814867