Salvia bowleyana chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · NC_063911.1 · 11–84 bp · −
psbA · NC_063911.1 · 392–1,450 bp · −
trnK-UUU · NC_063911.1 · 1,672–4,266 bp · −
matK · NC_063911.1 · 1,972–3,534 bp · −
rps16 · NC_063911.1 · 4,836–5,946 bp · −
trnQ-UUG · NC_063911.1 · 6,917–6,988 bp · −
trnS-GCU · NC_063911.1 · 8,219–8,306 bp · −
ATPA · NC_063911.1 · 10,111–11,634 bp · −
ATPF · NC_063911.1 · 11,729–12,977 bp · −
ATPH · NC_063911.1 · 13,251–13,496 bp · −
ATPI · NC_063911.1 · 14,466–15,209 bp · −
rps2 · NC_063911.1 · 15,436–16,146 bp · −
rpoC2 · NC_063911.1 · 16,357–20,544 bp · −
rpoC1 · NC_063911.1 · 20,702–23,515 bp · −
rpoB · NC_063911.1 · 23,542–26,754 bp · −
psbM · NC_063911.1 · 29,196–29,300 bp · −
trnD-GUC · NC_063911.1 · 29,820–29,893 bp · −
trnY-GUA · NC_063911.1 · 30,004–30,087 bp · −
trnE-UUC · NC_063911.1 · 30,159–30,231 bp · −
trnS-UGA · NC_063911.1 · 34,897–34,989 bp · −
trnfM-CAU · NC_063911.1 · 36,033–36,106 bp · −
rps14 · NC_063911.1 · 36,251–36,553 bp · −
psaB · NC_063911.1 · 36,676–38,880 bp · −
psaA · NC_063911.1 · 38,906–41,158 bp · −
ycf3 · NC_063911.1 · 41,942–43,891 bp · −
rps4 · NC_063911.1 · 45,070–45,675 bp · −
trnT-UGU · NC_063911.1 · 46,064–46,136 bp · −
ndhJ · NC_063911.1 · 48,255–48,731 bp · −
ndhK · NC_063911.1 · 48,842–49,519 bp · −
ndhC · NC_063911.1 · 49,572–49,934 bp · −
trnV-UAC · NC_063911.1 · 50,883–51,531 bp · −
ATPE · NC_063911.1 · 51,988–52,389 bp · −
ATPB · NC_063911.1 · 52,386–53,882 bp · −
psbJ · NC_063911.1 · 63,341–63,463 bp · −
psbL · NC_063911.1 · 63,593–63,709 bp · −
psbF · NC_063911.1 · 63,733–63,852 bp · −
psbE · NC_063911.1 · 63,867–64,118 bp · −
trnW-CCA · NC_063911.1 · 65,427–65,500 bp · −
trnP-UGG · NC_063911.1 · 65,671–65,744 bp · −
rpl20 · NC_063911.1 · 67,524–67,910 bp · −
rps12 · NC_063911.1 · 68,721–68,834 bp · −
rps12 · NC_063911.1 · 96,134–96,914 bp · −
clpP · NC_063911.1 · 68,958–70,866 bp · −
psbN · NC_063911.1 · 73,201–73,332 bp · −
rpoA · NC_063911.1 · 76,709–77,716 bp · −
rps11 · NC_063911.1 · 77,788–78,204 bp · −
rpl36 · NC_063911.1 · 78,314–78,427 bp · −
infA · NC_063911.1 · 78,523–78,756 bp · −
rps8 · NC_063911.1 · 78,883–79,287 bp · −
rpl14 · NC_063911.1 · 79,475–79,843 bp · −
rpl16 · NC_063911.1 · 79,975–81,254 bp · −
rps3 · NC_063911.1 · 81,390–82,052 bp · −
rpl22 · NC_063911.1 · 82,037–82,504 bp · −
rps19 · NC_063911.1 · 82,574–82,852 bp · −
rpl2 · NC_063911.1 · 82,912–84,394 bp · −
rpl23 · NC_063911.1 · 84,413–84,694 bp · −
trnI-CAU · NC_063911.1 · 84,860–84,933 bp · −
trnL-CAA · NC_063911.1 · 92,491–92,571 bp · −
ndhB · NC_063911.1 · 93,131–95,284 bp · −
rps7 · NC_063911.1 · 95,613–96,080 bp · −
trnN-GUU · NC_063911.1 · 106,910–106,981 bp · −
ndhF · NC_063911.1 · 108,335–110,569 bp · −
ndhD · NC_063911.1 · 113,259–114,800 bp · −
psaC · NC_063911.1 · 114,909–115,154 bp · −
ndhE · NC_063911.1 · 115,405–115,707 bp · −
ndhG · NC_063911.1 · 115,926–116,456 bp · −
ndhI · NC_063911.1 · 116,833–117,339 bp · −
ndhA · NC_063911.1 · 117,420–119,510 bp · −
ndhH · NC_063911.1 · 119,512–120,747 bp · −
rps15 · NC_063911.1 · 120,793–121,065 bp · −
ycf1 · NC_063911.1 · 121,491–127,118 bp · −
trnR-ACG · NC_063911.1 · 127,928–128,001 bp · −
rrn5 · NC_063911.1 · 128,245–128,365 bp · −
rrn4.5 · NC_063911.1 · 128,590–128,692 bp · −
rrn23 · NC_063911.1 · 128,793–131,601 bp · −
trnA-UGC · NC_063911.1 · 131,767–132,634 bp · −
trnI-GAU · NC_063911.1 · 132,699–133,710 bp · −
rrn16 · NC_063911.1 · 134,009–135,499 bp · −
trnV-GAC · NC_063911.1 · 135,726–135,797 bp · −
ycf15 · NC_063911.1 · 142,088–142,336 bp · −
ycf2 · NC_063911.1 · 142,427–149,296 bp · −
psbK · NC_063911.1 · 7,381–7,560 bp · +
psbI · NC_063911.1 · 7,957–8,067 bp · +
trnG-UCC · NC_063911.1 · 8,990–9,744 bp · +
trnR-UCU · NC_063911.1 · 9,928–9,999 bp · +
trnC-GCA · NC_063911.1 · 27,897–27,967 bp · +
petN · NC_063911.1 · 28,130–28,219 bp · +
trnT-GGU · NC_063911.1 · 30,770–30,841 bp · +
psbD · NC_063911.1 · 32,221–33,282 bp · +
psbC · NC_063911.1 · 33,230–34,651 bp · +
psbZ · NC_063911.1 · 35,324–35,512 bp · +
trnG-GCC · NC_063911.1 · 35,784–35,854 bp · +
trnS-GGA · NC_063911.1 · 44,708–44,794 bp · +
trnL-UAA · NC_063911.1 · 46,812–47,351 bp · +
trnF-GAA · NC_063911.1 · 47,650–47,722 bp · +
trnM-CAU · NC_063911.1 · 51,720–51,792 bp · +
rbcL · NC_063911.1 · 54,647–56,101 bp · +
accD · NC_063911.1 · 56,792–58,279 bp · +
psaI · NC_063911.1 · 58,753–58,863 bp · +
ycf4 · NC_063911.1 · 59,319–59,873 bp · +
cemA · NC_063911.1 · 60,421–61,110 bp · +
petA · NC_063911.1 · 61,316–62,278 bp · +
petL · NC_063911.1 · 64,925–65,020 bp · +
petG · NC_063911.1 · 65,199–65,312 bp · +
psaJ · NC_063911.1 · 65,996–66,169 bp · +
rpl33 · NC_063911.1 · 66,621–66,821 bp · +
rps18 · NC_063911.1 · 66,987–67,292 bp · +
rps12 · NC_063911.1 · 137,404–138,184 bp · +
psbB · NC_063911.1 · 71,326–72,852 bp · +
psbT · NC_063911.1 · 73,033–73,140 bp · +
psbH · NC_063911.1 · 73,438–73,659 bp · +
petB · NC_063911.1 · 73,785–75,135 bp · +
petD · NC_063911.1 · 75,329–76,532 bp · +
ycf2 · NC_063911.1 · 85,022–91,891 bp · +
ycf15 · NC_063911.1 · 91,982–92,230 bp · +
trnV-GAC · NC_063911.1 · 98,521–98,592 bp · +
rrn16 · NC_063911.1 · 98,819–100,309 bp · +
trnI-GAU · NC_063911.1 · 100,608–101,619 bp · +
trnA-UGC · NC_063911.1 · 101,684–102,551 bp · +
rrn23 · NC_063911.1 · 102,717–105,525 bp · +
rrn4.5 · NC_063911.1 · 105,626–105,728 bp · +
rrn5 · NC_063911.1 · 105,953–106,073 bp · +
trnR-ACG · NC_063911.1 · 106,317–106,390 bp · +
rpl32 · NC_063911.1 · 111,004–111,174 bp · +
trnL-UAG · NC_063911.1 · 111,879–111,958 bp · +
ccsA · NC_063911.1 · 112,051–113,028 bp · +
trnN-GUU · NC_063911.1 · 127,337–127,408 bp · +
rps7 · NC_063911.1 · 138,238–138,705 bp · +
ndhB · NC_063911.1 · 139,034–141,187 bp · +
trnL-CAA · NC_063911.1 · 141,747–141,827 bp · +
trnI-CAU · NC_063911.1 · 149,385–149,458 bp · +
rpl23 · NC_063911.1 · 149,624–149,905 bp · +
rpl2 · NC_063911.1 · 149,924–151,406 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Salvia bowleyana
ANNOTATED PLASTOME
NC_063911.1
151,508 bp · 132 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37877 75754 113631 151508 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU ATPA ATPF ATPH ATPI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC ATPE ATPB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
133 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 11 84 74 Locate
psbA gene − 392 1450 1059 Locate
trnK-UUU gene − 1672 4266 2595 Locate
matK gene − 1972 3534 1563 Locate
rps16 gene − 4836 5946 1111 Locate
trnQ-UUG gene − 6917 6988 72 Locate
psbK gene + 7381 7560 180 Locate
psbI gene + 7957 8067 111 Locate
trnS-GCU gene − 8219 8306 88 Locate
trnG-UCC gene + 8990 9744 755 Locate
trnR-UCU gene + 9928 9999 72 Locate
ATPA gene − 10111 11634 1524 Locate
ATPF gene − 11729 12977 1249 Locate
ATPH gene − 13251 13496 246 Locate
ATPI gene − 14466 15209 744 Locate
rps2 gene − 15436 16146 711 Locate
rpoC2 gene − 16357 20544 4188 Locate
rpoC1 gene − 20702 23515 2814 Locate
rpoB gene − 23542 26754 3213 Locate
trnC-GCA gene + 27897 27967 71 Locate
petN gene + 28130 28219 90 Locate
psbM gene − 29196 29300 105 Locate
trnD-GUC gene − 29820 29893 74 Locate
trnY-GUA gene − 30004 30087 84 Locate
trnE-UUC gene − 30159 30231 73 Locate
trnT-GGU gene + 30770 30841 72 Locate
psbD gene + 32221 33282 1062 Locate
psbC gene + 33230 34651 1422 Locate
trnS-UGA gene − 34897 34989 93 Locate
psbZ gene + 35324 35512 189 Locate
trnG-GCC gene + 35784 35854 71 Locate
trnfM-CAU gene − 36033 36106 74 Locate
rps14 gene − 36251 36553 303 Locate
psaB gene − 36676 38880 2205 Locate
psaA gene − 38906 41158 2253 Locate
ycf3 gene − 41942 43891 1950 Locate
trnS-GGA gene + 44708 44794 87 Locate
rps4 gene − 45070 45675 606 Locate
trnT-UGU gene − 46064 46136 73 Locate
trnL-UAA gene + 46812 47351 540 Locate
trnF-GAA gene + 47650 47722 73 Locate
ndhJ gene − 48255 48731 477 Locate
ndhK gene − 48842 49519 678 Locate
ndhC gene − 49572 49934 363 Locate
trnV-UAC gene − 50883 51531 649 Locate
trnM-CAU gene + 51720 51792 73 Locate
ATPE gene − 51988 52389 402 Locate
ATPB gene − 52386 53882 1497 Locate
rbcL gene + 54647 56101 1455 Locate
accD gene + 56792 58279 1488 Locate
psaI gene + 58753 58863 111 Locate
ycf4 gene + 59319 59873 555 Locate
cemA gene + 60421 61110 690 Locate
petA gene + 61316 62278 963 Locate
psbJ gene − 63341 63463 123 Locate
psbL gene − 63593 63709 117 Locate
psbF gene − 63733 63852 120 Locate
psbE gene − 63867 64118 252 Locate
petL gene + 64925 65020 96 Locate
petG gene + 65199 65312 114 Locate
trnW-CCA gene − 65427 65500 74 Locate
trnP-UGG gene − 65671 65744 74 Locate
psaJ gene + 65996 66169 174 Locate
rpl33 gene + 66621 66821 201 Locate
rps18 gene + 66987 67292 306 Locate
rpl20 gene − 67524 67910 387 Locate
rps12 gene − 68721 68834 114 Locate
clpP gene − 68958 70866 1909 Locate
psbB gene + 71326 72852 1527 Locate
psbT gene + 73033 73140 108 Locate
psbN gene − 73201 73332 132 Locate
psbH gene + 73438 73659 222 Locate
petB gene + 73785 75135 1351 Locate
petD gene + 75329 76532 1204 Locate
rpoA gene − 76709 77716 1008 Locate
rps11 gene − 77788 78204 417 Locate
rpl36 gene − 78314 78427 114 Locate
infA gene − 78523 78756 234 Locate
rps8 gene − 78883 79287 405 Locate
rpl14 gene − 79475 79843 369 Locate
rpl16 gene − 79975 81254 1280 Locate
rps3 gene − 81390 82052 663 Locate
rpl22 gene − 82037 82504 468 Locate
rps19 gene − 82574 82852 279 Locate
rpl2 gene − 82912 84394 1483 Locate
rpl23 gene − 84413 84694 282 Locate
trnI-CAU gene − 84860 84933 74 Locate
ycf2 gene + 85022 91891 6870 Locate
ycf15 gene + 91982 92230 249 Locate
trnL-CAA gene − 92491 92571 81 Locate
ndhB gene − 93131 95284 2154 Locate
rps7 gene − 95613 96080 468 Locate
rps12 gene − 96134 96914 781 Locate
trnV-GAC gene + 98521 98592 72 Locate
rrn16 gene + 98819 100309 1491 Locate
trnI-GAU gene + 100608 101619 1012 Locate
trnA-UGC gene + 101684 102551 868 Locate
rrn23 gene + 102717 105525 2809 Locate
rrn4.5 gene + 105626 105728 103 Locate
rrn5 gene + 105953 106073 121 Locate
trnR-ACG gene + 106317 106390 74 Locate
trnN-GUU gene − 106910 106981 72 Locate
ndhF gene − 108335 110569 2235 Locate
rpl32 gene + 111004 111174 171 Locate
trnL-UAG gene + 111879 111958 80 Locate
ccsA gene + 112051 113028 978 Locate
ndhD gene − 113259 114800 1542 Locate
psaC gene − 114909 115154 246 Locate
ndhE gene − 115405 115707 303 Locate
ndhG gene − 115926 116456 531 Locate
ndhI gene − 116833 117339 507 Locate
ndhA gene − 117420 119510 2091 Locate
ndhH gene − 119512 120747 1236 Locate
rps15 gene − 120793 121065 273 Locate
ycf1 gene − 121491 127118 5628 Locate
trnN-GUU gene + 127337 127408 72 Locate
trnR-ACG gene − 127928 128001 74 Locate
rrn5 gene − 128245 128365 121 Locate
rrn4.5 gene − 128590 128692 103 Locate
rrn23 gene − 128793 131601 2809 Locate
trnA-UGC gene − 131767 132634 868 Locate
trnI-GAU gene − 132699 133710 1012 Locate
rrn16 gene − 134009 135499 1491 Locate
trnV-GAC gene − 135726 135797 72 Locate
rps12 gene + 137404 138184 781 Locate
rps7 gene + 138238 138705 468 Locate
ndhB gene + 139034 141187 2154 Locate
trnL-CAA gene + 141747 141827 81 Locate
ycf15 gene − 142088 142336 249 Locate
ycf2 gene − 142427 149296 6870 Locate
trnI-CAU gene + 149385 149458 74 Locate
rpl23 gene + 149624 149905 282 Locate
rpl2 gene + 149924 151406 1483 Locate
Status Available
Accession NC_063911.1
Length 151,508 bp
GC content 38.0%
Annotated genes 132
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 14 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources