Salvia bucharica chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · PV601297.1 · 11–85 bp · −
psbA · PV601297.1 · 421–1,479 bp · −
trnK-UUU · PV601297.1 · 1,711–4,298 bp · −
matK · PV601297.1 · 2,030–3,559 bp · −
rps16 · PV601297.1 · 4,867–5,979 bp · −
trnQ-UUG · PV601297.1 · 6,531–6,602 bp · −
trnS-GCU · PV601297.1 · 7,823–7,910 bp · −
atpA · PV601297.1 · 9,728–11,251 bp · −
atpF · PV601297.1 · 11,347–12,614 bp · −
atpH · PV601297.1 · 12,893–13,138 bp · −
atpI · PV601297.1 · 14,159–14,902 bp · −
rps2 · PV601297.1 · 15,127–15,837 bp · −
rpoC2 · PV601297.1 · 16,051–20,232 bp · −
rpoC1 · PV601297.1 · 20,397–23,213 bp · −
rpoB · PV601297.1 · 23,240–26,452 bp · −
psbM · PV601297.1 · 28,825–28,929 bp · −
trnD-GUC · PV601297.1 · 29,448–29,521 bp · −
trnY-GUA · PV601297.1 · 29,632–29,715 bp · −
trnE-UUC · PV601297.1 · 29,787–29,859 bp · −
trnS-UGA · PV601297.1 · 34,524–34,616 bp · −
trnfM-CAU · PV601297.1 · 35,657–35,730 bp · −
rps14 · PV601297.1 · 35,875–36,177 bp · −
psaB · PV601297.1 · 36,300–38,504 bp · −
psaA · PV601297.1 · 38,530–40,782 bp · −
ycf3 · PV601297.1 · 41,566–43,522 bp · −
rps4 · PV601297.1 · 44,420–45,025 bp · −
trnT-UGU · PV601297.1 · 45,376–45,448 bp · −
ndhJ · PV601297.1 · 47,714–48,208 bp · −
ndhK · PV601297.1 · 48,301–48,978 bp · −
ndhC · PV601297.1 · 49,030–49,392 bp · −
trnV-UAC · PV601297.1 · 50,360–51,008 bp · −
atpE · PV601297.1 · 51,472–51,873 bp · −
atpB · PV601297.1 · 51,870–53,366 bp · −
psbJ · PV601297.1 · 62,873–62,995 bp · −
psbL · PV601297.1 · 63,125–63,241 bp · −
psbF · PV601297.1 · 63,265–63,384 bp · −
psbE · PV601297.1 · 63,399–63,650 bp · −
trnW-CCA · PV601297.1 · 65,054–65,127 bp · −
trnP-UGG · PV601297.1 · 65,301–65,374 bp · −
rpl20 · PV601297.1 · 67,131–67,517 bp · −
rps12 · PV601297.1 · 68,313–68,426 bp · −
rps12 · PV601297.1 · 95,667–96,460 bp · −
clpP · PV601297.1 · 68,549–70,458 bp · −
psbN · PV601297.1 · 72,789–72,920 bp · −
rpoA · PV601297.1 · 76,309–77,316 bp · −
rps11 · PV601297.1 · 77,387–77,803 bp · −
rpl36 · PV601297.1 · 77,913–78,026 bp · −
infA · PV601297.1 · 78,122–78,355 bp · −
rps8 · PV601297.1 · 78,476–78,880 bp · −
rpl14 · PV601297.1 · 79,062–79,430 bp · −
rpl16 · PV601297.1 · 79,553–80,819 bp · −
rps3 · PV601297.1 · 80,962–81,624 bp · −
rpl22 · PV601297.1 · 81,609–82,076 bp · −
rps19 · PV601297.1 · 82,146–82,424 bp · −
rpl2 · PV601297.1 · 82,484–83,971 bp · −
rpl23 · PV601297.1 · 83,990–84,271 bp · −
trnI-CAU · PV601297.1 · 84,437–84,510 bp · −
trnL-CAA · PV601297.1 · 92,032–92,112 bp · −
ndhB · PV601297.1 · 92,664–94,871 bp · −
rps7 · PV601297.1 · 95,146–95,613 bp · −
trnN-GUU · PV601297.1 · 106,514–106,585 bp · −
ndhF · PV601297.1 · 107,939–110,170 bp · −
ndhD · PV601297.1 · 112,927–114,441 bp · −
psaC · PV601297.1 · 114,564–114,809 bp · −
ndhE · PV601297.1 · 115,060–115,365 bp · −
ndhG · PV601297.1 · 115,578–116,108 bp · −
ndhI · PV601297.1 · 116,492–116,998 bp · −
ndhA · PV601297.1 · 117,079–119,175 bp · −
ndhH · PV601297.1 · 119,177–120,358 bp · −
rps15 · PV601297.1 · 120,458–120,730 bp · −
ycf1 · PV601297.1 · 121,120–126,762 bp · −
trnR-ACG · PV601297.1 · 127,577–127,650 bp · −
rrn5 · PV601297.1 · 127,894–128,014 bp · −
rrn4.5 · PV601297.1 · 128,264–128,366 bp · −
rrn23 · PV601297.1 · 128,465–131,275 bp · −
trnA-UGC · PV601297.1 · 131,441–132,318 bp · −
trnI-GAU · PV601297.1 · 132,383–133,402 bp · −
rrn16 · PV601297.1 · 133,701–135,191 bp · −
trnV-GAC · PV601297.1 · 135,418–135,489 bp · −
ycf15 · PV601297.1 · 141,795–142,058 bp · −
ycf2 · PV601297.1 · 142,134–148,967 bp · −
psbK · PV601297.1 · 6,989–7,168 bp · +
psbI · PV601297.1 · 7,567–7,677 bp · +
trnG-UCC · PV601297.1 · 8,615–9,370 bp · +
trnR-UCU · PV601297.1 · 9,551–9,622 bp · +
trnC-GCA · PV601297.1 · 27,576–27,646 bp · +
petN · PV601297.1 · 27,810–27,899 bp · +
trnT-GGU · PV601297.1 · 30,428–30,499 bp · +
psbD · PV601297.1 · 31,849–32,910 bp · +
psbC · PV601297.1 · 32,858–34,279 bp · +
psbZ · PV601297.1 · 34,951–35,139 bp · +
trnG-GCC · PV601297.1 · 35,417–35,487 bp · +
trnS-GGA · PV601297.1 · 44,082–44,168 bp · +
trnL-UAA · PV601297.1 · 46,140–46,714 bp · +
trnF-GAA · PV601297.1 · 46,998–47,070 bp · +
trnM-CAU · PV601297.1 · 51,189–51,261 bp · +
rbcL · PV601297.1 · 54,137–55,591 bp · +
accD · PV601297.1 · 56,288–57,769 bp · +
psaI · PV601297.1 · 58,236–58,346 bp · +
ycf4 · PV601297.1 · 58,793–59,347 bp · +
cemA · PV601297.1 · 60,002–60,691 bp · +
petA · PV601297.1 · 60,894–61,856 bp · +
petL · PV601297.1 · 64,551–64,646 bp · +
petG · PV601297.1 · 64,825–64,938 bp · +
psaJ · PV601297.1 · 65,649–65,783 bp · +
rpl33 · PV601297.1 · 66,221–66,421 bp · +
rps18 · PV601297.1 · 66,592–66,897 bp · +
rps12 · PV601297.1 · 137,106–137,899 bp · +
psbB · PV601297.1 · 70,912–72,438 bp · +
psbT · PV601297.1 · 72,621–72,728 bp · +
psbH · PV601297.1 · 73,026–73,247 bp · +
petB · PV601297.1 · 73,373–74,754 bp · +
petD · PV601297.1 · 74,942–76,132 bp · +
ycf2 · PV601297.1 · 84,599–91,432 bp · +
ycf15 · PV601297.1 · 91,508–91,771 bp · +
trnV-GAC · PV601297.1 · 98,077–98,148 bp · +
rrn16 · PV601297.1 · 98,375–99,865 bp · +
trnI-GAU · PV601297.1 · 100,164–101,183 bp · +
trnA-UGC · PV601297.1 · 101,248–102,125 bp · +
rrn23 · PV601297.1 · 102,291–105,101 bp · +
rrn4.5 · PV601297.1 · 105,200–105,302 bp · +
rrn5 · PV601297.1 · 105,552–105,672 bp · +
trnR-ACG · PV601297.1 · 105,916–105,989 bp · +
ycf1 · PV601297.1 · 106,804–108,072 bp · +
rpl32 · PV601297.1 · 110,619–110,780 bp · +
trnL-UAG · PV601297.1 · 111,528–111,607 bp · +
ccsA · PV601297.1 · 111,721–112,692 bp · +
trnN-GUU · PV601297.1 · 126,981–127,052 bp · +
rps7 · PV601297.1 · 137,953–138,420 bp · +
ndhB · PV601297.1 · 138,695–140,902 bp · +
trnL-CAA · PV601297.1 · 141,454–141,534 bp · +
trnI-CAU · PV601297.1 · 149,056–149,129 bp · +
rpl23 · PV601297.1 · 149,295–149,576 bp · +
rpl2 · PV601297.1 · 149,595–151,082 bp · +
rps19 · PV601297.1 · 151,142–151,184 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Salvia bucharica
ANNOTATED PLASTOME
PV601297.1
151,184 bp · 134 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37796 75592 113388 151184 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG ycf1 rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2 rps19
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
135 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 11 85 75 Locate
psbA gene − 421 1479 1059 Locate
trnK-UUU gene − 1711 4298 2588 Locate
matK gene − 2030 3559 1530 Locate
rps16 gene − 4867 5979 1113 Locate
trnQ-UUG gene − 6531 6602 72 Locate
psbK gene + 6989 7168 180 Locate
psbI gene + 7567 7677 111 Locate
trnS-GCU gene − 7823 7910 88 Locate
trnG-UCC gene + 8615 9370 756 Locate
trnR-UCU gene + 9551 9622 72 Locate
atpA gene − 9728 11251 1524 Locate
atpF gene − 11347 12614 1268 Locate
atpH gene − 12893 13138 246 Locate
atpI gene − 14159 14902 744 Locate
rps2 gene − 15127 15837 711 Locate
rpoC2 gene − 16051 20232 4182 Locate
rpoC1 gene − 20397 23213 2817 Locate
rpoB gene − 23240 26452 3213 Locate
trnC-GCA gene + 27576 27646 71 Locate
petN gene + 27810 27899 90 Locate
psbM gene − 28825 28929 105 Locate
trnD-GUC gene − 29448 29521 74 Locate
trnY-GUA gene − 29632 29715 84 Locate
trnE-UUC gene − 29787 29859 73 Locate
trnT-GGU gene + 30428 30499 72 Locate
psbD gene + 31849 32910 1062 Locate
psbC gene + 32858 34279 1422 Locate
trnS-UGA gene − 34524 34616 93 Locate
psbZ gene + 34951 35139 189 Locate
trnG-GCC gene + 35417 35487 71 Locate
trnfM-CAU gene − 35657 35730 74 Locate
rps14 gene − 35875 36177 303 Locate
psaB gene − 36300 38504 2205 Locate
psaA gene − 38530 40782 2253 Locate
ycf3 gene − 41566 43522 1957 Locate
trnS-GGA gene + 44082 44168 87 Locate
rps4 gene − 44420 45025 606 Locate
trnT-UGU gene − 45376 45448 73 Locate
trnL-UAA gene + 46140 46714 575 Locate
trnF-GAA gene + 46998 47070 73 Locate
ndhJ gene − 47714 48208 495 Locate
ndhK gene − 48301 48978 678 Locate
ndhC gene − 49030 49392 363 Locate
trnV-UAC gene − 50360 51008 649 Locate
trnM-CAU gene + 51189 51261 73 Locate
atpE gene − 51472 51873 402 Locate
atpB gene − 51870 53366 1497 Locate
rbcL gene + 54137 55591 1455 Locate
accD gene + 56288 57769 1482 Locate
psaI gene + 58236 58346 111 Locate
ycf4 gene + 58793 59347 555 Locate
cemA gene + 60002 60691 690 Locate
petA gene + 60894 61856 963 Locate
psbJ gene − 62873 62995 123 Locate
psbL gene − 63125 63241 117 Locate
psbF gene − 63265 63384 120 Locate
psbE gene − 63399 63650 252 Locate
petL gene + 64551 64646 96 Locate
petG gene + 64825 64938 114 Locate
trnW-CCA gene − 65054 65127 74 Locate
trnP-UGG gene − 65301 65374 74 Locate
psaJ gene + 65649 65783 135 Locate
rpl33 gene + 66221 66421 201 Locate
rps18 gene + 66592 66897 306 Locate
rpl20 gene − 67131 67517 387 Locate
rps12 gene − 68313 68426 114 Locate
clpP gene − 68549 70458 1910 Locate
psbB gene + 70912 72438 1527 Locate
psbT gene + 72621 72728 108 Locate
psbN gene − 72789 72920 132 Locate
psbH gene + 73026 73247 222 Locate
petB gene + 73373 74754 1382 Locate
petD gene + 74942 76132 1191 Locate
rpoA gene − 76309 77316 1008 Locate
rps11 gene − 77387 77803 417 Locate
rpl36 gene − 77913 78026 114 Locate
infA gene − 78122 78355 234 Locate
rps8 gene − 78476 78880 405 Locate
rpl14 gene − 79062 79430 369 Locate
rpl16 gene − 79553 80819 1267 Locate
rps3 gene − 80962 81624 663 Locate
rpl22 gene − 81609 82076 468 Locate
rps19 gene − 82146 82424 279 Locate
rpl2 gene − 82484 83971 1488 Locate
rpl23 gene − 83990 84271 282 Locate
trnI-CAU gene − 84437 84510 74 Locate
ycf2 gene + 84599 91432 6834 Locate
ycf15 gene + 91508 91771 264 Locate
trnL-CAA gene − 92032 92112 81 Locate
ndhB gene − 92664 94871 2208 Locate
rps7 gene − 95146 95613 468 Locate
rps12 gene − 95667 96460 794 Locate
trnV-GAC gene + 98077 98148 72 Locate
rrn16 gene + 98375 99865 1491 Locate
trnI-GAU gene + 100164 101183 1020 Locate
trnA-UGC gene + 101248 102125 878 Locate
rrn23 gene + 102291 105101 2811 Locate
rrn4.5 gene + 105200 105302 103 Locate
rrn5 gene + 105552 105672 121 Locate
trnR-ACG gene + 105916 105989 74 Locate
trnN-GUU gene − 106514 106585 72 Locate
ycf1 gene + 106804 108072 1269 Locate
ndhF gene − 107939 110170 2232 Locate
rpl32 gene + 110619 110780 162 Locate
trnL-UAG gene + 111528 111607 80 Locate
ccsA gene + 111721 112692 972 Locate
ndhD gene − 112927 114441 1515 Locate
psaC gene − 114564 114809 246 Locate
ndhE gene − 115060 115365 306 Locate
ndhG gene − 115578 116108 531 Locate
ndhI gene − 116492 116998 507 Locate
ndhA gene − 117079 119175 2097 Locate
ndhH gene − 119177 120358 1182 Locate
rps15 gene − 120458 120730 273 Locate
ycf1 gene − 121120 126762 5643 Locate
trnN-GUU gene + 126981 127052 72 Locate
trnR-ACG gene − 127577 127650 74 Locate
rrn5 gene − 127894 128014 121 Locate
rrn4.5 gene − 128264 128366 103 Locate
rrn23 gene − 128465 131275 2811 Locate
trnA-UGC gene − 131441 132318 878 Locate
trnI-GAU gene − 132383 133402 1020 Locate
rrn16 gene − 133701 135191 1491 Locate
trnV-GAC gene − 135418 135489 72 Locate
rps12 gene + 137106 137899 794 Locate
rps7 gene + 137953 138420 468 Locate
ndhB gene + 138695 140902 2208 Locate
trnL-CAA gene + 141454 141534 81 Locate
ycf15 gene − 141795 142058 264 Locate
ycf2 gene − 142134 148967 6834 Locate
trnI-CAU gene + 149056 149129 74 Locate
rpl23 gene + 149295 149576 282 Locate
rpl2 gene + 149595 151082 1488 Locate
rps19 gene + 151142 151184 43 Locate
Status Available
Accession PV601297.1
Length 151,184 bp
GC content 38.0%
Annotated genes 134
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 15 Ribosomal Protein 27 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources