Salvia castanea f. tomentosa chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
trnH-GUG · MW387501.1 · 12–85 bp · −
psbA · MW387501.1 · 395–1,453 bp · −
trnK-UUU · MW387501.1 · 1,685–4,278 bp · −
matK · MW387501.1 · 1,984–3,546 bp · −
rps16 · MW387501.1 · 4,850–5,965 bp · −
trnQ-UUG · MW387501.1 · 6,928–6,999 bp · −
trnS-GCU · MW387501.1 · 8,235–8,322 bp · −
atpA · MW387501.1 · 10,119–11,642 bp · −
atpF · MW387501.1 · 11,755–13,004 bp · −
atpH · MW387501.1 · 13,270–13,515 bp · −
atpI · MW387501.1 · 14,515–15,258 bp · −
rps2 · MW387501.1 · 15,490–16,200 bp · −
rpoC2 · MW387501.1 · 16,409–20,596 bp · −
rpoC1 · MW387501.1 · 20,754–23,595 bp · −
rpoB · MW387501.1 · 23,601–26,813 bp · −
psbM · MW387501.1 · 29,267–29,371 bp · −
trnD-GUC · MW387501.1 · 29,892–29,965 bp · −
trnY-GUA · MW387501.1 · 30,076–30,159 bp · −
trnE-UUC · MW387501.1 · 30,225–30,297 bp · −
trnS-UGA · MW387501.1 · 34,948–35,040 bp · −
trnfM-CAU · MW387501.1 · 36,081–36,154 bp · −
rps14 · MW387501.1 · 36,299–36,601 bp · −
psaB · MW387501.1 · 36,724–38,928 bp · −
psaA · MW387501.1 · 38,954–41,206 bp · −
ycf3 · MW387501.1 · 41,990–43,926 bp · −
rps4 · MW387501.1 · 45,106–45,711 bp · −
trnT-UGU · MW387501.1 · 46,076–46,148 bp · −
ndhJ · MW387501.1 · 48,256–48,732 bp · −
ndhK · MW387501.1 · 48,843–49,520 bp · −
ndhC · MW387501.1 · 49,572–49,934 bp · −
trnV-UAC · MW387501.1 · 50,884–51,532 bp · −
atpE · MW387501.1 · 52,004–52,405 bp · −
atpB · MW387501.1 · 52,402–53,898 bp · −
psbJ · MW387501.1 · 63,431–63,553 bp · −
psbL · MW387501.1 · 63,683–63,799 bp · −
psbF · MW387501.1 · 63,823–63,942 bp · −
psbE · MW387501.1 · 63,957–64,208 bp · −
trnW-CCA · MW387501.1 · 65,516–65,589 bp · −
trnP-UGG · MW387501.1 · 65,768–65,841 bp · −
rpl20 · MW387501.1 · 67,620–68,006 bp · −
rps12 · MW387501.1 · 68,816–68,929 bp · −
rps12 · MW387501.1 · 96,185–96,978 bp · −
clpP · MW387501.1 · 69,053–70,975 bp · −
psbN · MW387501.1 · 73,289–73,420 bp · −
rpoA · MW387501.1 · 76,798–77,805 bp · −
rps11 · MW387501.1 · 77,877–78,293 bp · −
rpl36 · MW387501.1 · 78,403–78,516 bp · −
infA · MW387501.1 · 78,612–78,845 bp · −
rps8 · MW387501.1 · 78,972–79,376 bp · −
rpl14 · MW387501.1 · 79,567–79,935 bp · −
rpl16 · MW387501.1 · 80,067–81,341 bp · −
rps3 · MW387501.1 · 81,477–82,139 bp · −
rpl22 · MW387501.1 · 82,124–82,591 bp · −
rps19 · MW387501.1 · 82,661–82,939 bp · −
rpl2 · MW387501.1 · 82,999–84,481 bp · −
rpl23 · MW387501.1 · 84,500–84,781 bp · −
trnI-CAU · MW387501.1 · 84,947–85,020 bp · −
trnL-CAA · MW387501.1 · 92,542–92,622 bp · −
ndhB · MW387501.1 · 93,182–95,389 bp · −
rps7 · MW387501.1 · 95,664–96,131 bp · −
trnN-GUU · MW387501.1 · 106,990–107,061 bp · −
ndhF · MW387501.1 · 108,415–110,631 bp · −
ndhD · MW387501.1 · 113,344–114,885 bp · −
psaC · MW387501.1 · 114,983–115,228 bp · −
ndhE · MW387501.1 · 115,479–115,784 bp · −
ndhG · MW387501.1 · 115,999–116,529 bp · −
ndhI · MW387501.1 · 116,910–117,416 bp · −
ndhA · MW387501.1 · 117,497–119,591 bp · −
ndhH · MW387501.1 · 119,593–120,774 bp · −
rps15 · MW387501.1 · 120,874–121,146 bp · −
ycf1 · MW387501.1 · 121,563–127,097 bp · −
trnR-ACG · MW387501.1 · 127,973–128,046 bp · −
rrn5 · MW387501.1 · 128,290–128,410 bp · −
rrn4.5 · MW387501.1 · 128,666–128,768 bp · −
rrn23 · MW387501.1 · 128,867–131,677 bp · −
trnA-UGC · MW387501.1 · 131,843–132,719 bp · −
trnI-GAU · MW387501.1 · 132,784–133,796 bp · −
rrn16 · MW387501.1 · 134,095–135,585 bp · −
trnV-GAC · MW387501.1 · 135,812–135,883 bp · −
ycf15 · MW387501.1 · 142,207–142,455 bp · −
ycf2 · MW387501.1 · 142,546–149,379 bp · −
psbK · MW387501.1 · 7,386–7,565 bp · +
psbI · MW387501.1 · 7,962–8,072 bp · +
trnG-UCC · MW387501.1 · 9,008–9,758 bp · +
trnR-UCU · MW387501.1 · 9,941–10,012 bp · +
trnC-GCA · MW387501.1 · 27,967–28,037 bp · +
petN · MW387501.1 · 28,201–28,290 bp · +
trnT-GGU · MW387501.1 · 30,836–30,907 bp · +
psbD · MW387501.1 · 32,272–33,333 bp · +
psbC · MW387501.1 · 33,281–34,702 bp · +
psbZ · MW387501.1 · 35,375–35,563 bp · +
trnG-GCC · MW387501.1 · 35,835–35,905 bp · +
trnS-GGA · MW387501.1 · 44,743–44,829 bp · +
trnL-UAA · MW387501.1 · 46,818–47,357 bp · +
trnF-GAA · MW387501.1 · 47,657–47,729 bp · +
trnM-CAU · MW387501.1 · 51,721–51,793 bp · +
rbcL · MW387501.1 · 54,683–56,116 bp · +
accD · MW387501.1 · 56,820–58,307 bp · +
psaI · MW387501.1 · 58,782–58,892 bp · +
ycf4 · MW387501.1 · 59,340–59,894 bp · +
cemA · MW387501.1 · 60,505–61,194 bp · +
petA · MW387501.1 · 61,415–62,377 bp · +
petL · MW387501.1 · 65,014–65,109 bp · +
petG · MW387501.1 · 65,288–65,401 bp · +
psaJ · MW387501.1 · 66,132–66,266 bp · +
rpl33 · MW387501.1 · 66,717–66,917 bp · +
rps18 · MW387501.1 · 67,083–67,388 bp · +
rps12 · MW387501.1 · 137,510–138,303 bp · +
psbB · MW387501.1 · 71,424–72,950 bp · +
psbT · MW387501.1 · 73,121–73,228 bp · +
psbH · MW387501.1 · 73,526–73,747 bp · +
petB · MW387501.1 · 73,881–75,230 bp · +
petD · MW387501.1 · 75,424–76,621 bp · +
ycf2 · MW387501.1 · 85,109–91,942 bp · +
ycf15 · MW387501.1 · 92,033–92,281 bp · +
trnV-GAC · MW387501.1 · 98,605–98,676 bp · +
rrn16 · MW387501.1 · 98,903–100,393 bp · +
trnI-GAU · MW387501.1 · 100,692–101,704 bp · +
trnA-UGC · MW387501.1 · 101,769–102,645 bp · +
rrn23 · MW387501.1 · 102,811–105,621 bp · +
rrn4.5 · MW387501.1 · 105,720–105,822 bp · +
rrn5 · MW387501.1 · 106,078–106,198 bp · +
trnR-ACG · MW387501.1 · 106,442–106,515 bp · +
ycf1 · MW387501.1 · 107,391–108,548 bp · +
rpl32 · MW387501.1 · 111,078–111,248 bp · +
trnL-UAG · MW387501.1 · 111,961–112,040 bp · +
ccsA · MW387501.1 · 112,133–113,110 bp · +
trnN-GUU · MW387501.1 · 127,427–127,498 bp · +
rps7 · MW387501.1 · 138,357–138,824 bp · +
ndhB · MW387501.1 · 139,099–141,306 bp · +
trnL-CAA · MW387501.1 · 141,866–141,946 bp · +
trnI-CAU · MW387501.1 · 149,468–149,541 bp · +
rpl23 · MW387501.1 · 149,707–149,988 bp · +
rpl2 · MW387501.1 · 150,007–151,489 bp · +
rps19 · MW387501.1 · 151,549–151,590 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Salvia castanea f. tomentosa
ANNOTATED PLASTOME
MW387501.1
151,590 bp · 134 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37898 75795 113692 151590 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG ycf1 rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2 rps19
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
135 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 12 85 74 Locate
psbA gene − 395 1453 1059 Locate
trnK-UUU gene − 1685 4278 2594 Locate
matK gene − 1984 3546 1563 Locate
rps16 gene − 4850 5965 1116 Locate
trnQ-UUG gene − 6928 6999 72 Locate
psbK gene + 7386 7565 180 Locate
psbI gene + 7962 8072 111 Locate
trnS-GCU gene − 8235 8322 88 Locate
trnG-UCC gene + 9008 9758 751 Locate
trnR-UCU gene + 9941 10012 72 Locate
atpA gene − 10119 11642 1524 Locate
atpF gene − 11755 13004 1250 Locate
atpH gene − 13270 13515 246 Locate
atpI gene − 14515 15258 744 Locate
rps2 gene − 15490 16200 711 Locate
rpoC2 gene − 16409 20596 4188 Locate
rpoC1 gene − 20754 23595 2842 Locate
rpoB gene − 23601 26813 3213 Locate
trnC-GCA gene + 27967 28037 71 Locate
petN gene + 28201 28290 90 Locate
psbM gene − 29267 29371 105 Locate
trnD-GUC gene − 29892 29965 74 Locate
trnY-GUA gene − 30076 30159 84 Locate
trnE-UUC gene − 30225 30297 73 Locate
trnT-GGU gene + 30836 30907 72 Locate
psbD gene + 32272 33333 1062 Locate
psbC gene + 33281 34702 1422 Locate
trnS-UGA gene − 34948 35040 93 Locate
psbZ gene + 35375 35563 189 Locate
trnG-GCC gene + 35835 35905 71 Locate
trnfM-CAU gene − 36081 36154 74 Locate
rps14 gene − 36299 36601 303 Locate
psaB gene − 36724 38928 2205 Locate
psaA gene − 38954 41206 2253 Locate
ycf3 gene − 41990 43926 1937 Locate
trnS-GGA gene + 44743 44829 87 Locate
rps4 gene − 45106 45711 606 Locate
trnT-UGU gene − 46076 46148 73 Locate
trnL-UAA gene + 46818 47357 540 Locate
trnF-GAA gene + 47657 47729 73 Locate
ndhJ gene − 48256 48732 477 Locate
ndhK gene − 48843 49520 678 Locate
ndhC gene − 49572 49934 363 Locate
trnV-UAC gene − 50884 51532 649 Locate
trnM-CAU gene + 51721 51793 73 Locate
atpE gene − 52004 52405 402 Locate
atpB gene − 52402 53898 1497 Locate
rbcL gene + 54683 56116 1434 Locate
accD gene + 56820 58307 1488 Locate
psaI gene + 58782 58892 111 Locate
ycf4 gene + 59340 59894 555 Locate
cemA gene + 60505 61194 690 Locate
petA gene + 61415 62377 963 Locate
psbJ gene − 63431 63553 123 Locate
psbL gene − 63683 63799 117 Locate
psbF gene − 63823 63942 120 Locate
psbE gene − 63957 64208 252 Locate
petL gene + 65014 65109 96 Locate
petG gene + 65288 65401 114 Locate
trnW-CCA gene − 65516 65589 74 Locate
trnP-UGG gene − 65768 65841 74 Locate
psaJ gene + 66132 66266 135 Locate
rpl33 gene + 66717 66917 201 Locate
rps18 gene + 67083 67388 306 Locate
rpl20 gene − 67620 68006 387 Locate
rps12 gene − 68816 68929 114 Locate
clpP gene − 69053 70975 1923 Locate
psbB gene + 71424 72950 1527 Locate
psbT gene + 73121 73228 108 Locate
psbN gene − 73289 73420 132 Locate
psbH gene + 73526 73747 222 Locate
petB gene + 73881 75230 1350 Locate
petD gene + 75424 76621 1198 Locate
rpoA gene − 76798 77805 1008 Locate
rps11 gene − 77877 78293 417 Locate
rpl36 gene − 78403 78516 114 Locate
infA gene − 78612 78845 234 Locate
rps8 gene − 78972 79376 405 Locate
rpl14 gene − 79567 79935 369 Locate
rpl16 gene − 80067 81341 1275 Locate
rps3 gene − 81477 82139 663 Locate
rpl22 gene − 82124 82591 468 Locate
rps19 gene − 82661 82939 279 Locate
rpl2 gene − 82999 84481 1483 Locate
rpl23 gene − 84500 84781 282 Locate
trnI-CAU gene − 84947 85020 74 Locate
ycf2 gene + 85109 91942 6834 Locate
ycf15 gene + 92033 92281 249 Locate
trnL-CAA gene − 92542 92622 81 Locate
ndhB gene − 93182 95389 2208 Locate
rps7 gene − 95664 96131 468 Locate
rps12 gene − 96185 96978 794 Locate
trnV-GAC gene + 98605 98676 72 Locate
rrn16 gene + 98903 100393 1491 Locate
trnI-GAU gene + 100692 101704 1013 Locate
trnA-UGC gene + 101769 102645 877 Locate
rrn23 gene + 102811 105621 2811 Locate
rrn4.5 gene + 105720 105822 103 Locate
rrn5 gene + 106078 106198 121 Locate
trnR-ACG gene + 106442 106515 74 Locate
trnN-GUU gene − 106990 107061 72 Locate
ycf1 gene + 107391 108548 1158 Locate
ndhF gene − 108415 110631 2217 Locate
rpl32 gene + 111078 111248 171 Locate
trnL-UAG gene + 111961 112040 80 Locate
ccsA gene + 112133 113110 978 Locate
ndhD gene − 113344 114885 1542 Locate
psaC gene − 114983 115228 246 Locate
ndhE gene − 115479 115784 306 Locate
ndhG gene − 115999 116529 531 Locate
ndhI gene − 116910 117416 507 Locate
ndhA gene − 117497 119591 2095 Locate
ndhH gene − 119593 120774 1182 Locate
rps15 gene − 120874 121146 273 Locate
ycf1 gene − 121563 127097 5535 Locate
trnN-GUU gene + 127427 127498 72 Locate
trnR-ACG gene − 127973 128046 74 Locate
rrn5 gene − 128290 128410 121 Locate
rrn4.5 gene − 128666 128768 103 Locate
rrn23 gene − 128867 131677 2811 Locate
trnA-UGC gene − 131843 132719 877 Locate
trnI-GAU gene − 132784 133796 1013 Locate
rrn16 gene − 134095 135585 1491 Locate
trnV-GAC gene − 135812 135883 72 Locate
rps12 gene + 137510 138303 794 Locate
rps7 gene + 138357 138824 468 Locate
ndhB gene + 139099 141306 2208 Locate
trnL-CAA gene + 141866 141946 81 Locate
ycf15 gene − 142207 142455 249 Locate
ycf2 gene − 142546 149379 6834 Locate
trnI-CAU gene + 149468 149541 74 Locate
rpl23 gene + 149707 149988 282 Locate
rpl2 gene + 150007 151489 1483 Locate
rps19 gene + 151549 151590 42 Locate
Status Available
Accession MW387501.1
Length 151,590 bp
GC content 38.0%
Annotated genes 134
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 15 Ribosomal Protein 27 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 0
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources