Coordinate-aware organelle record

Salvia castanea chloroplast genome

Available NC_067740.1 151,469 bp 134 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

134 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	5	79	74
psbA	gene	photosystem-ii	−	389	1448	1059
trnK-UUU	gene	translation-rna	−	1679	4272	2593
matK	gene	other	−	1978	3541	1563
rps16	gene	ribosomal-protein	−	4843	5955	1112
trnQ-UUG	gene	translation-rna	−	6920	6992	72
psbK	gene	photosystem-ii	+	7378	7558	180
psbI	gene	photosystem-ii	+	7954	8065	111
trnS-GCU	gene	translation-rna	−	8220	8308	88
trnG-UCC	gene	translation-rna	+	8994	9750	756
trnR-UCU	gene	translation-rna	+	9931	10003	72
atpA	gene	atp-synthase	−	10109	11633	1524
atpF	gene	atp-synthase	−	11730	12980	1250
atpH	gene	atp-synthase	−	13245	13491	246
atpI	gene	atp-synthase	−	14480	15224	744
rps2	gene	ribosomal-protein	−	15449	16160	711
rpoC2	gene	rna-polymerase	−	16370	20558	4188
rpoC1	gene	rna-polymerase	−	20715	23536	2821
rpoB	gene	rna-polymerase	−	23562	26775	3213
trnC-GCA	gene	translation-rna	+	27922	27993	71
petN	gene	cytochrome	+	28156	28246	90
psbM	gene	photosystem-ii	−	29245	29350	105
trnD-GUC	gene	translation-rna	−	29870	29944	74
trnY-GUA	gene	translation-rna	−	30054	30138	84
trnE-UUC	gene	translation-rna	−	30203	30276	73
trnT-GGU	gene	translation-rna	+	30814	30886	72
psbD	gene	photosystem-ii	+	32264	33326	1062
psbC	gene	photosystem-ii	+	33273	34695	1422
trnS-UGA	gene	translation-rna	−	34941	35034	93
psbZ	gene	photosystem-ii	+	35368	35557	189
trnG-GCC	gene	translation-rna	+	35828	35899	71
trnfM-CAU	gene	translation-rna	−	36074	36148	74
rps14	gene	ribosomal-protein	−	36292	36595	303
psaB	gene	photosystem-i	−	36722	38927	2205
psaA	gene	photosystem-i	−	38952	41205	2253
ycf3	gene	other	−	41914	43852	1938
trnS-GGA	gene	translation-rna	+	44669	44756	87
rps4	gene	ribosomal-protein	−	45038	45644	606
trnT-UGU	gene	translation-rna	−	46007	46080	73
trnL-UAA	gene	translation-rna	+	46750	47290	540
trnF-GAA	gene	translation-rna	+	47588	47661	73
ndhJ	gene	nad-dehydrogenase	−	48184	48661	477
ndhK	gene	nad-dehydrogenase	−	48771	49449	678
ndhC	gene	nad-dehydrogenase	−	49500	49863	363
trnV-UAC	gene	translation-rna	−	50811	51460	649
trnM-CAU	gene	translation-rna	+	51640	51713	73
atpE	gene	atp-synthase	−	51923	52325	402
atpB	gene	atp-synthase	−	52321	53818	1497
rbcL	gene	other	+	54581	56036	1455
accD	gene	other	+	56735	58223	1488
psaI	gene	photosystem-i	+	58697	58808	111
ycf4	gene	other	+	59255	59810	555
cemA	gene	other	+	60420	61110	690
petA	gene	cytochrome	+	61330	62293	963
psbJ	gene	photosystem-ii	−	63341	63464	123
psbL	gene	photosystem-ii	−	63593	63710	117
psbF	gene	photosystem-ii	−	63733	63853	120
psbE	gene	photosystem-ii	−	63867	64119	252
petL	gene	cytochrome	+	64925	65021	96
petG	gene	cytochrome	+	65199	65313	114
trnW-CCA	gene	translation-rna	−	65427	65501	74
trnP-UGG	gene	translation-rna	−	65679	65753	74
psaJ	gene	photosystem-i	+	66004	66178	174
rpl33	gene	ribosomal-protein	+	66628	66829	201
rps18	gene	ribosomal-protein	+	66994	67300	306
rpl20	gene	ribosomal-protein	−	67520	67907	387
rps12	gene	ribosomal-protein	−	68699	96854	28155
rps12	gene	ribosomal-protein	+	68699	138192	69493
clpP	gene	other	−	68936	70847	1911
psbB	gene	photosystem-ii	+	71295	72822	1527
psbT	gene	photosystem-ii	+	72999	73107	108
psbN	gene	photosystem-ii	−	73167	73299	132
psbH	gene	photosystem-ii	+	73404	73626	222
petB	gene	cytochrome	+	73759	75108	1349
petD	gene	cytochrome	+	75301	76499	1198
rpoA	gene	rna-polymerase	−	76675	77683	1008
rps11	gene	ribosomal-protein	−	77754	78171	417
rpl36	gene	ribosomal-protein	−	78280	78394	114
infA	gene	other	−	78489	78723	234
rps8	gene	ribosomal-protein	−	78849	79254	405
rpl14	gene	ribosomal-protein	−	79441	79810	369
rpl16	gene	ribosomal-protein	−	79941	81224	1283
rps3	gene	ribosomal-protein	−	81359	82022	663
rpl22	gene	ribosomal-protein	−	82006	82474	468
rps19	gene	ribosomal-protein	−	82543	82822	279
rpl2	gene	ribosomal-protein	−	82881	84364	1483
rpl23	gene	ribosomal-protein	−	84382	84664	282
trnI-CAU	gene	translation-rna	−	84829	84903	74
ycf2	gene	other	+	84991	91825	6834
ycf15	gene	other	+	91907	92156	249
trnL-CAA	gene	translation-rna	−	92416	92497	81
ndhB	gene	nad-dehydrogenase	−	93057	95211	2154
rps7	gene	ribosomal-protein	−	95539	96007	468
trnV-GAC	gene	translation-rna	+	98480	98552	72
rrn16	gene	ribosomal-rna	+	98778	100269	1491
trnI-GAU	gene	translation-rna	+	100567	101580	1013
trnA-UGC	gene	translation-rna	+	101644	102521	877
rrn23	gene	ribosomal-rna	+	102686	105495	2809
rrn4.5	gene	ribosomal-rna	+	105595	105698	103
rrn5	gene	ribosomal-rna	+	105953	106074	121
trnR-ACG	gene	translation-rna	+	106317	106391	74
trnN-GUU	gene	translation-rna	−	106865	106937	72
ycf1	gene	other	+	107155	108322	1167
ndhF	gene	nad-dehydrogenase	−	108290	110531	2241
rpl32	gene	ribosomal-protein	+	110963	111134	171
trnL-UAG	gene	translation-rna	+	111846	111926	80
ccsA	gene	other	+	111970	112996	1026
ndhD	gene	nad-dehydrogenase	−	113228	114770	1542
psaC	gene	photosystem-i	−	114866	115112	246
ndhE	gene	nad-dehydrogenase	−	115362	115665	303
ndhG	gene	nad-dehydrogenase	−	115882	116413	531
ndhI	gene	nad-dehydrogenase	−	116793	117300	507
ndhA	gene	nad-dehydrogenase	−	117380	119475	2095
ndhH	gene	nad-dehydrogenase	−	119476	120712	1236
rps15	gene	ribosomal-protein	−	120795	121035	240
ycf1	gene	other	−	121451	127097	5646
trnN-GUU	gene	translation-rna	+	127315	127387	72
trnR-ACG	gene	translation-rna	−	127861	127935	74
rrn5	gene	ribosomal-rna	−	128178	128299	121
rrn4.5	gene	ribosomal-rna	−	128554	128657	103
rrn23	gene	ribosomal-rna	−	128757	131566	2809
trnA-UGC	gene	translation-rna	−	131731	132608	877
trnI-GAU	gene	translation-rna	−	132672	133685	1013
rrn16	gene	ribosomal-rna	−	133983	135474	1491
trnV-GAC	gene	translation-rna	−	135700	135772	72
rps7	gene	ribosomal-protein	+	138245	138713	468
ndhB	gene	nad-dehydrogenase	+	139041	141195	2154
trnL-CAA	gene	translation-rna	+	141755	141836	81
ycf15	gene	other	−	142096	142345	249
ycf2	gene	other	−	142427	149261	6834
trnI-CAU	gene	translation-rna	+	149349	149423	74
rpl23	gene	ribosomal-protein	+	149588	149870	282
rpl2	gene	ribosomal-protein	+	149888	151371	1483
rps19	gene	ribosomal-protein	+	151430	151469	39

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_067740.1DNA · accDNC_067740DNA · atpBNC_067740DNA · matKNC_067740DNA · ndhFNC_067740DNA · psbANC_067740DNA · rbcLNC_067740DNA · rps12NC_067740DNA · ycf1NC_067740