Salvia chanryoenica chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
psbA · NC_040121.1 · 1–1,059 bp · −
trnK-UUU · NC_040121.1 · 1,301–3,893 bp · −
matK · NC_040121.1 · 1,600–3,162 bp · −
rps16 · NC_040121.1 · 4,468–5,602 bp · −
trnS-GCU · NC_040121.1 · 7,889–7,976 bp · −
atpA · NC_040121.1 · 9,762–11,285 bp · −
atpF · NC_040121.1 · 11,381–12,626 bp · −
atpH · NC_040121.1 · 12,892–13,137 bp · −
atpI · NC_040121.1 · 14,120–14,863 bp · −
rps2 · NC_040121.1 · 15,088–15,798 bp · −
rpoC2 · NC_040121.1 · 16,009–20,196 bp · −
rpoC1 · NC_040121.1 · 20,354–23,195 bp · −
rpoB · NC_040121.1 · 23,201–26,413 bp · −
psbM · NC_040121.1 · 28,858–28,962 bp · −
trnS-UGA · NC_040121.1 · 34,571–34,663 bp · −
trnfM-CAU · NC_040121.1 · 35,701–35,774 bp · −
rps14 · NC_040121.1 · 35,919–36,221 bp · −
psaB · NC_040121.1 · 36,344–38,548 bp · −
psaA · NC_040121.1 · 38,574–40,826 bp · −
ycf3 · NC_040121.1 · 41,601–43,544 bp · −
rps4 · NC_040121.1 · 44,732–45,337 bp · −
trnT-UGU · NC_040121.1 · 45,710–45,782 bp · −
ndhJ · NC_040121.1 · 47,907–48,383 bp · −
ndhK · NC_040121.1 · 48,494–49,171 bp · −
ndhC · NC_040121.1 · 49,223–49,585 bp · −
trnV-UAC · NC_040121.1 · 50,534–51,182 bp · −
atpE · NC_040121.1 · 51,654–52,055 bp · −
atpB · NC_040121.1 · 52,052–53,548 bp · −
psbJ · NC_040121.1 · 63,075–63,197 bp · −
psbL · NC_040121.1 · 63,327–63,443 bp · −
psbF · NC_040121.1 · 63,467–63,586 bp · −
psbE · NC_040121.1 · 63,601–63,852 bp · −
trnW-CCA · NC_040121.1 · 65,130–65,203 bp · −
trnP-UGG · NC_040121.1 · 65,382–65,455 bp · −
rpl20 · NC_040121.1 · 67,252–67,638 bp · −
rps12 · NC_040121.1 · 68,447–68,560 bp · −
rps12 · NC_040121.1 · 95,815–96,598 bp · −
clpP · NC_040121.1 · 68,686–70,603 bp · −
psbN · NC_040121.1 · 72,925–73,056 bp · −
rpoA · NC_040121.1 · 76,433–77,440 bp · −
rps11 · NC_040121.1 · 77,512–77,928 bp · −
rpl36 · NC_040121.1 · 78,038–78,151 bp · −
infA · NC_040121.1 · 78,247–78,480 bp · −
rps8 · NC_040121.1 · 78,607–79,011 bp · −
rpl14 · NC_040121.1 · 79,192–79,560 bp · −
rpl16 · NC_040121.1 · 79,692–80,971 bp · −
rps3 · NC_040121.1 · 81,107–81,769 bp · −
rpl22 · NC_040121.1 · 81,754–82,221 bp · −
rps19 · NC_040121.1 · 82,291–82,569 bp · −
rpl2 · NC_040121.1 · 82,629–84,111 bp · −
rpl23 · NC_040121.1 · 84,130–84,411 bp · −
trnI-CAU · NC_040121.1 · 84,577–84,650 bp · −
trnL-CAA · NC_040121.1 · 92,172–92,252 bp · −
ndhB · NC_040121.1 · 92,812–95,019 bp · −
rps7 · NC_040121.1 · 95,294–95,761 bp · −
trnN-GUU · NC_040121.1 · 106,647–106,718 bp · −
ndhF · NC_040121.1 · 108,072–110,288 bp · −
ndhD · NC_040121.1 · 113,019–114,560 bp · −
psaC · NC_040121.1 · 114,659–114,904 bp · −
ndhE · NC_040121.1 · 115,155–115,460 bp · −
ndhG · NC_040121.1 · 115,681–116,211 bp · −
ndhI · NC_040121.1 · 116,600–117,106 bp · −
ndhA · NC_040121.1 · 117,187–119,278 bp · −
ndhH · NC_040121.1 · 119,280–120,461 bp · −
rps15 · NC_040121.1 · 120,561–120,833 bp · −
ycf1 · NC_040121.1 · 121,250–126,793 bp · −
trnR-ACG · NC_040121.1 · 127,714–127,787 bp · −
rrn5 · NC_040121.1 · 128,031–128,151 bp · −
rrn4.5 · NC_040121.1 · 128,407–128,509 bp · −
rrn23 · NC_040121.1 · 128,608–131,418 bp · −
trnA-UGC · NC_040121.1 · 131,584–132,460 bp · −
trnI-GAU · NC_040121.1 · 132,525–133,537 bp · −
rrn16 · NC_040121.1 · 133,836–135,326 bp · −
trnV-GAC · NC_040121.1 · 135,553–135,624 bp · −
ycf2 · NC_040121.1 · 142,269–149,102 bp · −
trnH-GUG · NC_040121.1 · 151,325–151,399 bp · −
trnQ-UUG · NC_040121.1 · 6,570–6,641 bp · +
psbK · NC_040121.1 · 7,028–7,207 bp · +
psbI · NC_040121.1 · 7,614–7,724 bp · +
trnG-UCC · NC_040121.1 · 8,650–9,402 bp · +
trnR-UCU · NC_040121.1 · 9,581–9,655 bp · +
trnC-GCA · NC_040121.1 · 27,567–27,642 bp · +
petN · NC_040121.1 · 27,801–27,890 bp · +
trnD-GUC · NC_040121.1 · 29,488–29,561 bp · +
trnY-GUA · NC_040121.1 · 29,672–29,755 bp · +
trnE-UUC · NC_040121.1 · 29,827–29,896 bp · +
trnT-GGU · NC_040121.1 · 30,450–30,521 bp · +
psbD · NC_040121.1 · 31,894–32,955 bp · +
psbC · NC_040121.1 · 32,903–34,324 bp · +
psbZ · NC_040121.1 · 34,998–35,186 bp · +
trnG-GCC · NC_040121.1 · 35,457–35,527 bp · +
trnS-GGA · NC_040121.1 · 44,369–44,455 bp · +
trnL-UAA · NC_040121.1 · 46,442–47,001 bp · +
trnL-UAA · NC_040121.1 · 46,462–46,498 bp · +
trnL-UAA · NC_040121.1 · 46,952–47,001 bp · +
trnF-GAA · NC_040121.1 · 47,300–47,372 bp · +
trnM-CAU · NC_040121.1 · 51,371–51,443 bp · +
rbcL · NC_040121.1 · 54,333–55,772 bp · +
accD · NC_040121.1 · 56,500–57,945 bp · +
psaI · NC_040121.1 · 58,437–58,547 bp · +
ycf4 · NC_040121.1 · 58,996–59,550 bp · +
cemA · NC_040121.1 · 60,161–60,850 bp · +
petA · NC_040121.1 · 61,071–62,033 bp · +
petL · NC_040121.1 · 64,659–64,754 bp · +
petG · NC_040121.1 · 64,902–65,015 bp · +
psaJ · NC_040121.1 · 65,747–65,881 bp · +
rpl33 · NC_040121.1 · 66,332–66,532 bp · +
rps18 · NC_040121.1 · 66,714–67,019 bp · +
rps12 · NC_040121.1 · 137,243–138,026 bp · +
psbB · NC_040121.1 · 71,046–72,572 bp · +
psbT · NC_040121.1 · 72,757–72,864 bp · +
psbH · NC_040121.1 · 73,162–73,383 bp · +
petB · NC_040121.1 · 73,509–74,866 bp · +
petD · NC_040121.1 · 75,060–76,256 bp · +
ycf2 · NC_040121.1 · 84,739–91,572 bp · +
trnV-GAC · NC_040121.1 · 98,217–98,288 bp · +
rrn16 · NC_040121.1 · 98,515–100,005 bp · +
trnI-GAU · NC_040121.1 · 100,304–101,316 bp · +
trnA-UGC · NC_040121.1 · 101,381–102,257 bp · +
rrn23 · NC_040121.1 · 102,423–105,233 bp · +
rrn4.5 · NC_040121.1 · 105,332–105,434 bp · +
rrn5 · NC_040121.1 · 105,690–105,810 bp · +
trnR-ACG · NC_040121.1 · 106,054–106,127 bp · +
ycf1 · NC_040121.1 · 107,048–108,205 bp · +
rpl32 · NC_040121.1 · 110,738–110,908 bp · +
trnL-UAG · NC_040121.1 · 111,632–111,711 bp · +
ccsA · NC_040121.1 · 111,804–112,781 bp · +
trnN-GUU · NC_040121.1 · 127,123–127,194 bp · +
rps7 · NC_040121.1 · 138,080–138,547 bp · +
ndhB · NC_040121.1 · 138,822–141,029 bp · +
trnL-CAA · NC_040121.1 · 141,589–141,669 bp · +
trnI-CAU · NC_040121.1 · 149,191–149,264 bp · +
rpl23 · NC_040121.1 · 149,430–149,711 bp · +
rpl2 · NC_040121.1 · 149,730–151,212 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Salvia chanryoenica
ANNOTATED PLASTOME
NC_040121.1
151,689 bp · 132 genes
Gene function
Photosystem II
Transfer RNA
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37922 75844 113767 151689 bp
Forward strand 5′ → 3′
trnQ-UUG psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnD-GUC trnY-GUA trnE-UUC trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnL-UAA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG ycf1 rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
psbA trnK-UUU matK rps16 trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf2 trnH-GUG
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
134 local segments
Gene Type Group Strand Start End Length
psbA gene − 1 1059 1059 Locate
trnK-UUU gene − 1301 3893 2593 Locate
matK gene − 1600 3162 1563 Locate
rps16 gene − 4468 5602 1135 Locate
trnQ-UUG gene + 6570 6641 72 Locate
psbK gene + 7028 7207 180 Locate
psbI gene + 7614 7724 111 Locate
trnS-GCU gene − 7889 7976 88 Locate
trnG-UCC gene + 8650 9402 753 Locate
trnR-UCU gene + 9581 9655 75 Locate
atpA gene − 9762 11285 1524 Locate
atpF gene − 11381 12626 1246 Locate
atpH gene − 12892 13137 246 Locate
atpI gene − 14120 14863 744 Locate
rps2 gene − 15088 15798 711 Locate
rpoC2 gene − 16009 20196 4188 Locate
rpoC1 gene − 20354 23195 2842 Locate
rpoB gene − 23201 26413 3213 Locate
trnC-GCA gene + 27567 27642 76 Locate
petN gene + 27801 27890 90 Locate
psbM gene − 28858 28962 105 Locate
trnD-GUC gene + 29488 29561 74 Locate
trnY-GUA gene + 29672 29755 84 Locate
trnE-UUC gene + 29827 29896 70 Locate
trnT-GGU gene + 30450 30521 72 Locate
psbD gene + 31894 32955 1062 Locate
psbC gene + 32903 34324 1422 Locate
trnS-UGA gene − 34571 34663 93 Locate
psbZ gene + 34998 35186 189 Locate
trnG-GCC gene + 35457 35527 71 Locate
trnfM-CAU gene − 35701 35774 74 Locate
rps14 gene − 35919 36221 303 Locate
psaB gene − 36344 38548 2205 Locate
psaA gene − 38574 40826 2253 Locate
ycf3 gene − 41601 43544 1944 Locate
trnS-GGA gene + 44369 44455 87 Locate
rps4 gene − 44732 45337 606 Locate
trnT-UGU gene − 45710 45782 73 Locate
trnL-UAA gene + 46442 47001 560 Locate
trnL-UAA tRNA + 46462 46498 37 Locate
trnL-UAA tRNA + 46952 47001 50 Locate
trnF-GAA gene + 47300 47372 73 Locate
ndhJ gene − 47907 48383 477 Locate
ndhK gene − 48494 49171 678 Locate
ndhC gene − 49223 49585 363 Locate
trnV-UAC gene − 50534 51182 649 Locate
trnM-CAU gene + 51371 51443 73 Locate
atpE gene − 51654 52055 402 Locate
atpB gene − 52052 53548 1497 Locate
rbcL gene + 54333 55772 1440 Locate
accD gene + 56500 57945 1446 Locate
psaI gene + 58437 58547 111 Locate
ycf4 gene + 58996 59550 555 Locate
cemA gene + 60161 60850 690 Locate
petA gene + 61071 62033 963 Locate
psbJ gene − 63075 63197 123 Locate
psbL gene − 63327 63443 117 Locate
psbF gene − 63467 63586 120 Locate
psbE gene − 63601 63852 252 Locate
petL gene + 64659 64754 96 Locate
petG gene + 64902 65015 114 Locate
trnW-CCA gene − 65130 65203 74 Locate
trnP-UGG gene − 65382 65455 74 Locate
psaJ gene + 65747 65881 135 Locate
rpl33 gene + 66332 66532 201 Locate
rps18 gene + 66714 67019 306 Locate
rpl20 gene − 67252 67638 387 Locate
rps12 gene − 68447 68560 114 Locate
clpP gene − 68686 70603 1918 Locate
psbB gene + 71046 72572 1527 Locate
psbT gene + 72757 72864 108 Locate
psbN gene − 72925 73056 132 Locate
psbH gene + 73162 73383 222 Locate
petB gene + 73509 74866 1358 Locate
petD gene + 75060 76256 1197 Locate
rpoA gene − 76433 77440 1008 Locate
rps11 gene − 77512 77928 417 Locate
rpl36 gene − 78038 78151 114 Locate
infA gene − 78247 78480 234 Locate
rps8 gene − 78607 79011 405 Locate
rpl14 gene − 79192 79560 369 Locate
rpl16 gene − 79692 80971 1280 Locate
rps3 gene − 81107 81769 663 Locate
rpl22 gene − 81754 82221 468 Locate
rps19 gene − 82291 82569 279 Locate
rpl2 gene − 82629 84111 1483 Locate
rpl23 gene − 84130 84411 282 Locate
trnI-CAU gene − 84577 84650 74 Locate
ycf2 gene + 84739 91572 6834 Locate
trnL-CAA gene − 92172 92252 81 Locate
ndhB gene − 92812 95019 2208 Locate
rps7 gene − 95294 95761 468 Locate
rps12 gene − 95815 96598 784 Locate
trnV-GAC gene + 98217 98288 72 Locate
rrn16 gene + 98515 100005 1491 Locate
trnI-GAU gene + 100304 101316 1013 Locate
trnA-UGC gene + 101381 102257 877 Locate
rrn23 gene + 102423 105233 2811 Locate
rrn4.5 gene + 105332 105434 103 Locate
rrn5 gene + 105690 105810 121 Locate
trnR-ACG gene + 106054 106127 74 Locate
trnN-GUU gene − 106647 106718 72 Locate
ycf1 gene + 107048 108205 1158 Locate
ndhF gene − 108072 110288 2217 Locate
rpl32 gene + 110738 110908 171 Locate
trnL-UAG gene + 111632 111711 80 Locate
ccsA gene + 111804 112781 978 Locate
ndhD gene − 113019 114560 1542 Locate
psaC gene − 114659 114904 246 Locate
ndhE gene − 115155 115460 306 Locate
ndhG gene − 115681 116211 531 Locate
ndhI gene − 116600 117106 507 Locate
ndhA gene − 117187 119278 2092 Locate
ndhH gene − 119280 120461 1182 Locate
rps15 gene − 120561 120833 273 Locate
ycf1 gene − 121250 126793 5544 Locate
trnN-GUU gene + 127123 127194 72 Locate
trnR-ACG gene − 127714 127787 74 Locate
rrn5 gene − 128031 128151 121 Locate
rrn4.5 gene − 128407 128509 103 Locate
rrn23 gene − 128608 131418 2811 Locate
trnA-UGC gene − 131584 132460 877 Locate
trnI-GAU gene − 132525 133537 1013 Locate
rrn16 gene − 133836 135326 1491 Locate
trnV-GAC gene − 135553 135624 72 Locate
rps12 gene + 137243 138026 784 Locate
rps7 gene + 138080 138547 468 Locate
ndhB gene + 138822 141029 2208 Locate
trnL-CAA gene + 141589 141669 81 Locate
ycf2 gene − 142269 149102 6834 Locate
trnI-CAU gene + 149191 149264 74 Locate
rpl23 gene + 149430 149711 282 Locate
rpl2 gene + 149730 151212 1483 Locate
trnH-GUG gene − 151325 151399 75 Locate
Status Available
Accession NC_040121.1
Length 151,689 bp
GC content 38.0%
Annotated genes 132
Gene sequence records 8
Photosystem Ii 15 Translation Rna 39 Other 13 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 0
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources