Salvia chienii chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
trnH-GUG · OK094518.1 · 11–84 bp · −
psbA · OK094518.1 · 392–1,450 bp · −
trnK-UUU · OK094518.1 · 1,673–4,266 bp · −
matK · OK094518.1 · 1,972–3,534 bp · −
rps16 · OK094518.1 · 4,836–5,946 bp · −
trnQ-UUG · OK094518.1 · 6,925–6,996 bp · −
trnS-GCU · OK094518.1 · 8,227–8,314 bp · −
atpA · OK094518.1 · 10,119–11,642 bp · −
atpF · OK094518.1 · 11,743–12,989 bp · −
atpH · OK094518.1 · 13,263–13,508 bp · −
atpI · OK094518.1 · 14,478–15,221 bp · −
rps2 · OK094518.1 · 15,448–16,158 bp · −
rpoC2 · OK094518.1 · 16,368–20,555 bp · −
rpoC1 · OK094518.1 · 20,713–23,526 bp · −
rpoB · OK094518.1 · 23,553–26,765 bp · −
psbM · OK094518.1 · 29,207–29,311 bp · −
trnD-GUC · OK094518.1 · 29,831–29,904 bp · −
trnY-GUA · OK094518.1 · 30,015–30,098 bp · −
trnE-UUC · OK094518.1 · 30,170–30,242 bp · −
trnS-UGA · OK094518.1 · 34,908–35,000 bp · −
trnfM-CAU · OK094518.1 · 36,043–36,116 bp · −
rps14 · OK094518.1 · 36,261–36,563 bp · −
psaB · OK094518.1 · 36,686–38,890 bp · −
psaA · OK094518.1 · 38,916–41,168 bp · −
ycf3 · OK094518.1 · 41,952–43,902 bp · −
rps4 · OK094518.1 · 45,082–45,687 bp · −
trnT-UGU · OK094518.1 · 46,076–46,148 bp · −
ndhJ · OK094518.1 · 48,267–48,743 bp · −
ndhK · OK094518.1 · 48,854–49,531 bp · −
ndhC · OK094518.1 · 49,584–49,946 bp · −
trnV-UAC · OK094518.1 · 50,895–51,543 bp · −
atpE · OK094518.1 · 52,000–52,401 bp · −
atpB · OK094518.1 · 52,398–53,894 bp · −
psbJ · OK094518.1 · 63,352–63,474 bp · −
psbL · OK094518.1 · 63,604–63,720 bp · −
psbF · OK094518.1 · 63,744–63,863 bp · −
psbE · OK094518.1 · 63,878–64,129 bp · −
trnW-CCA · OK094518.1 · 65,438–65,511 bp · −
trnP-UGG · OK094518.1 · 65,682–65,755 bp · −
rpl20 · OK094518.1 · 67,535–67,921 bp · −
rps12 · OK094518.1 · 68,732–68,845 bp · −
rps12 · OK094518.1 · 96,103–96,886 bp · −
clpP · OK094518.1 · 68,969–70,878 bp · −
psbN · OK094518.1 · 73,212–73,343 bp · −
rpoA · OK094518.1 · 76,713–77,720 bp · −
rps11 · OK094518.1 · 77,792–78,208 bp · −
rpl36 · OK094518.1 · 78,318–78,431 bp · −
infA · OK094518.1 · 78,527–78,760 bp · −
rps8 · OK094518.1 · 78,887–79,291 bp · −
rpl14 · OK094518.1 · 79,479–79,847 bp · −
rpl16 · OK094518.1 · 79,979–81,259 bp · −
rps3 · OK094518.1 · 81,395–82,057 bp · −
rpl22 · OK094518.1 · 82,042–82,509 bp · −
rps19 · OK094518.1 · 82,579–82,728 bp · −
rpl2 · OK094518.1 · 82,917–84,399 bp · −
rpl23 · OK094518.1 · 84,418–84,699 bp · −
trnI-CAU · OK094518.1 · 84,865–84,938 bp · −
trnL-CAA · OK094518.1 · 92,460–92,540 bp · −
ndhB · OK094518.1 · 93,100–95,253 bp · −
rps7 · OK094518.1 · 95,582–96,049 bp · −
trnN-GUU · OK094518.1 · 106,925–106,996 bp · −
ndhF · OK094518.1 · 108,350–110,566 bp · −
ndhD · OK094518.1 · 113,273–114,814 bp · −
psaC · OK094518.1 · 114,925–115,170 bp · −
ndhE · OK094518.1 · 115,421–115,726 bp · −
ndhG · OK094518.1 · 115,942–116,472 bp · −
ndhI · OK094518.1 · 116,851–117,357 bp · −
ndhA · OK094518.1 · 117,438–119,514 bp · −
ndhH · OK094518.1 · 119,516–120,697 bp · −
rps15 · OK094518.1 · 120,797–121,069 bp · −
ycf1 · OK094518.1 · 121,495–127,011 bp · −
trnR-ACG · OK094518.1 · 127,932–128,005 bp · −
rrn5 · OK094518.1 · 128,249–128,369 bp · −
rrn4.5 · OK094518.1 · 128,625–128,727 bp · −
rrn23 · OK094518.1 · 128,826–131,636 bp · −
trnA-UGC · OK094518.1 · 131,802–132,669 bp · −
trnI-GAU · OK094518.1 · 132,734–133,745 bp · −
rrn16 · OK094518.1 · 134,044–135,534 bp · −
trnV-GAC · OK094518.1 · 135,761–135,832 bp · −
ycf15 · OK094518.1 · 142,146–142,343 bp · −
ycf2 · OK094518.1 · 142,485–149,318 bp · −
psbK · OK094518.1 · 7,389–7,568 bp · +
psbI · OK094518.1 · 7,965–8,075 bp · +
trnG-UCC · OK094518.1 · 9,000–9,752 bp · +
trnR-UCU · OK094518.1 · 9,936–10,007 bp · +
trnC-GCA · OK094518.1 · 27,908–27,978 bp · +
petN · OK094518.1 · 28,141–28,230 bp · +
trnT-GGU · OK094518.1 · 30,781–30,852 bp · +
psbD · OK094518.1 · 32,232–33,293 bp · +
psbC · OK094518.1 · 33,241–34,662 bp · +
psbZ · OK094518.1 · 35,335–35,523 bp · +
trnG-GCC · OK094518.1 · 35,795–35,865 bp · +
trnS-GGA · OK094518.1 · 44,719–44,805 bp · +
trnL-UAA · OK094518.1 · 46,824–47,363 bp · +
trnF-GAA · OK094518.1 · 47,662–47,734 bp · +
trnM-CAU · OK094518.1 · 51,732–51,804 bp · +
rbcL · OK094518.1 · 54,680–56,113 bp · +
accD · OK094518.1 · 56,804–58,291 bp · +
psaI · OK094518.1 · 58,765–58,875 bp · +
ycf4 · OK094518.1 · 59,331–59,885 bp · +
cemA · OK094518.1 · 60,433–61,122 bp · +
petA · OK094518.1 · 61,328–62,290 bp · +
petL · OK094518.1 · 64,936–65,031 bp · +
petG · OK094518.1 · 65,210–65,323 bp · +
psaJ · OK094518.1 · 66,046–66,180 bp · +
rpl33 · OK094518.1 · 66,632–66,832 bp · +
rps18 · OK094518.1 · 66,998–67,303 bp · +
rps12 · OK094518.1 · 137,459–138,242 bp · +
psbB · OK094518.1 · 71,338–72,864 bp · +
psbT · OK094518.1 · 73,044–73,151 bp · +
psbH · OK094518.1 · 73,449–73,670 bp · +
petB · OK094518.1 · 73,796–75,146 bp · +
petD · OK094518.1 · 75,340–76,536 bp · +
ycf2 · OK094518.1 · 85,027–91,860 bp · +
ycf15 · OK094518.1 · 92,002–92,199 bp · +
trnV-GAC · OK094518.1 · 98,505–98,576 bp · +
rrn16 · OK094518.1 · 98,803–100,293 bp · +
trnI-GAU · OK094518.1 · 100,592–101,603 bp · +
trnA-UGC · OK094518.1 · 101,668–102,535 bp · +
rrn23 · OK094518.1 · 102,701–105,511 bp · +
rrn4.5 · OK094518.1 · 105,610–105,712 bp · +
rrn5 · OK094518.1 · 105,968–106,088 bp · +
trnR-ACG · OK094518.1 · 106,332–106,405 bp · +
rpl32 · OK094518.1 · 111,019–111,189 bp · +
trnL-UAG · OK094518.1 · 111,894–111,973 bp · +
ccsA · OK094518.1 · 112,066–113,043 bp · +
trnN-GUU · OK094518.1 · 127,341–127,412 bp · +
rps7 · OK094518.1 · 138,296–138,763 bp · +
ndhB · OK094518.1 · 139,092–141,245 bp · +
trnL-CAA · OK094518.1 · 141,805–141,885 bp · +
trnI-CAU · OK094518.1 · 149,407–149,480 bp · +
rpl23 · OK094518.1 · 149,646–149,927 bp · +
rpl2 · OK094518.1 · 149,946–151,428 bp · +
rps19 · OK094518.1 · 151,488–151,523 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Salvia chienii
ANNOTATED PLASTOME
OK094518.1
151,530 bp · 133 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37882 75765 113648 151530 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2 rps19
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
134 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 11 84 74 Locate
psbA gene − 392 1450 1059 Locate
trnK-UUU gene − 1673 4266 2594 Locate
matK gene − 1972 3534 1563 Locate
rps16 gene − 4836 5946 1111 Locate
trnQ-UUG gene − 6925 6996 72 Locate
psbK gene + 7389 7568 180 Locate
psbI gene + 7965 8075 111 Locate
trnS-GCU gene − 8227 8314 88 Locate
trnG-UCC gene + 9000 9752 753 Locate
trnR-UCU gene + 9936 10007 72 Locate
atpA gene − 10119 11642 1524 Locate
atpF gene − 11743 12989 1247 Locate
atpH gene − 13263 13508 246 Locate
atpI gene − 14478 15221 744 Locate
rps2 gene − 15448 16158 711 Locate
rpoC2 gene − 16368 20555 4188 Locate
rpoC1 gene − 20713 23526 2814 Locate
rpoB gene − 23553 26765 3213 Locate
trnC-GCA gene + 27908 27978 71 Locate
petN gene + 28141 28230 90 Locate
psbM gene − 29207 29311 105 Locate
trnD-GUC gene − 29831 29904 74 Locate
trnY-GUA gene − 30015 30098 84 Locate
trnE-UUC gene − 30170 30242 73 Locate
trnT-GGU gene + 30781 30852 72 Locate
psbD gene + 32232 33293 1062 Locate
psbC gene + 33241 34662 1422 Locate
trnS-UGA gene − 34908 35000 93 Locate
psbZ gene + 35335 35523 189 Locate
trnG-GCC gene + 35795 35865 71 Locate
trnfM-CAU gene − 36043 36116 74 Locate
rps14 gene − 36261 36563 303 Locate
psaB gene − 36686 38890 2205 Locate
psaA gene − 38916 41168 2253 Locate
ycf3 gene − 41952 43902 1951 Locate
trnS-GGA gene + 44719 44805 87 Locate
rps4 gene − 45082 45687 606 Locate
trnT-UGU gene − 46076 46148 73 Locate
trnL-UAA gene + 46824 47363 540 Locate
trnF-GAA gene + 47662 47734 73 Locate
ndhJ gene − 48267 48743 477 Locate
ndhK gene − 48854 49531 678 Locate
ndhC gene − 49584 49946 363 Locate
trnV-UAC gene − 50895 51543 649 Locate
trnM-CAU gene + 51732 51804 73 Locate
atpE gene − 52000 52401 402 Locate
atpB gene − 52398 53894 1497 Locate
rbcL gene + 54680 56113 1434 Locate
accD gene + 56804 58291 1488 Locate
psaI gene + 58765 58875 111 Locate
ycf4 gene + 59331 59885 555 Locate
cemA gene + 60433 61122 690 Locate
petA gene + 61328 62290 963 Locate
psbJ gene − 63352 63474 123 Locate
psbL gene − 63604 63720 117 Locate
psbF gene − 63744 63863 120 Locate
psbE gene − 63878 64129 252 Locate
petL gene + 64936 65031 96 Locate
petG gene + 65210 65323 114 Locate
trnW-CCA gene − 65438 65511 74 Locate
trnP-UGG gene − 65682 65755 74 Locate
psaJ gene + 66046 66180 135 Locate
rpl33 gene + 66632 66832 201 Locate
rps18 gene + 66998 67303 306 Locate
rpl20 gene − 67535 67921 387 Locate
rps12 gene − 68732 68845 114 Locate
clpP gene − 68969 70878 1910 Locate
psbB gene + 71338 72864 1527 Locate
psbT gene + 73044 73151 108 Locate
psbN gene − 73212 73343 132 Locate
psbH gene + 73449 73670 222 Locate
petB gene + 73796 75146 1351 Locate
petD gene + 75340 76536 1197 Locate
rpoA gene − 76713 77720 1008 Locate
rps11 gene − 77792 78208 417 Locate
rpl36 gene − 78318 78431 114 Locate
infA gene − 78527 78760 234 Locate
rps8 gene − 78887 79291 405 Locate
rpl14 gene − 79479 79847 369 Locate
rpl16 gene − 79979 81259 1281 Locate
rps3 gene − 81395 82057 663 Locate
rpl22 gene − 82042 82509 468 Locate
rps19 gene − 82579 82728 150 Locate
rpl2 gene − 82917 84399 1483 Locate
rpl23 gene − 84418 84699 282 Locate
trnI-CAU gene − 84865 84938 74 Locate
ycf2 gene + 85027 91860 6834 Locate
ycf15 gene + 92002 92199 198 Locate
trnL-CAA gene − 92460 92540 81 Locate
ndhB gene − 93100 95253 2154 Locate
rps7 gene − 95582 96049 468 Locate
rps12 gene − 96103 96886 784 Locate
trnV-GAC gene + 98505 98576 72 Locate
rrn16 gene + 98803 100293 1491 Locate
trnI-GAU gene + 100592 101603 1012 Locate
trnA-UGC gene + 101668 102535 868 Locate
rrn23 gene + 102701 105511 2811 Locate
rrn4.5 gene + 105610 105712 103 Locate
rrn5 gene + 105968 106088 121 Locate
trnR-ACG gene + 106332 106405 74 Locate
trnN-GUU gene − 106925 106996 72 Locate
ndhF gene − 108350 110566 2217 Locate
rpl32 gene + 111019 111189 171 Locate
trnL-UAG gene + 111894 111973 80 Locate
ccsA gene + 112066 113043 978 Locate
ndhD gene − 113273 114814 1542 Locate
psaC gene − 114925 115170 246 Locate
ndhE gene − 115421 115726 306 Locate
ndhG gene − 115942 116472 531 Locate
ndhI gene − 116851 117357 507 Locate
ndhA gene − 117438 119514 2077 Locate
ndhH gene − 119516 120697 1182 Locate
rps15 gene − 120797 121069 273 Locate
ycf1 gene − 121495 127011 5517 Locate
trnN-GUU gene + 127341 127412 72 Locate
trnR-ACG gene − 127932 128005 74 Locate
rrn5 gene − 128249 128369 121 Locate
rrn4.5 gene − 128625 128727 103 Locate
rrn23 gene − 128826 131636 2811 Locate
trnA-UGC gene − 131802 132669 868 Locate
trnI-GAU gene − 132734 133745 1012 Locate
rrn16 gene − 134044 135534 1491 Locate
trnV-GAC gene − 135761 135832 72 Locate
rps12 gene + 137459 138242 784 Locate
rps7 gene + 138296 138763 468 Locate
ndhB gene + 139092 141245 2154 Locate
trnL-CAA gene + 141805 141885 81 Locate
ycf15 gene − 142146 142343 198 Locate
ycf2 gene − 142485 149318 6834 Locate
trnI-CAU gene + 149407 149480 74 Locate
rpl23 gene + 149646 149927 282 Locate
rpl2 gene + 149946 151428 1483 Locate
rps19 gene + 151488 151523 36 Locate
Status Available
Accession OK094518.1
Length 151,530 bp
GC content 38.0%
Annotated genes 133
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 14 Ribosomal Protein 27 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 0
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources