Salvia dabieshanensis chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · NC_063912.1 · 11–84 bp · −
psbA · NC_063912.1 · 392–1,450 bp · −
trnK-UUU · NC_063912.1 · 1,672–4,266 bp · −
matK · NC_063912.1 · 1,972–3,534 bp · −
rps16 · NC_063912.1 · 4,830–5,940 bp · −
trnQ-UUG · NC_063912.1 · 6,912–6,983 bp · −
trnS-GCU · NC_063912.1 · 8,216–8,303 bp · −
ATPA · NC_063912.1 · 10,120–11,643 bp · −
ATPF · NC_063912.1 · 11,739–12,986 bp · −
ATPH · NC_063912.1 · 13,260–13,505 bp · −
ATPI · NC_063912.1 · 14,475–15,218 bp · −
rps2 · NC_063912.1 · 15,445–16,155 bp · −
rpoC2 · NC_063912.1 · 16,365–20,552 bp · −
rpoC1 · NC_063912.1 · 20,710–23,523 bp · −
rpoB · NC_063912.1 · 23,550–26,762 bp · −
psbM · NC_063912.1 · 29,204–29,308 bp · −
trnD-GUC · NC_063912.1 · 29,828–29,901 bp · −
trnY-GUA · NC_063912.1 · 30,012–30,095 bp · −
trnE-UUC · NC_063912.1 · 30,167–30,239 bp · −
trnS-UGA · NC_063912.1 · 34,905–34,997 bp · −
trnfM-CAU · NC_063912.1 · 35,985–36,058 bp · −
rps14 · NC_063912.1 · 36,203–36,505 bp · −
psaB · NC_063912.1 · 36,628–38,832 bp · −
psaA · NC_063912.1 · 38,858–41,110 bp · −
ycf3 · NC_063912.1 · 41,894–43,844 bp · −
rps4 · NC_063912.1 · 45,024–45,629 bp · −
trnT-UGU · NC_063912.1 · 46,018–46,090 bp · −
ndhJ · NC_063912.1 · 48,209–48,685 bp · −
ndhK · NC_063912.1 · 48,796–49,473 bp · −
ndhC · NC_063912.1 · 49,526–49,888 bp · −
trnV-UAC · NC_063912.1 · 50,716–51,364 bp · −
ATPE · NC_063912.1 · 51,821–52,222 bp · −
ATPB · NC_063912.1 · 52,219–53,715 bp · −
psbJ · NC_063912.1 · 63,180–63,302 bp · −
psbL · NC_063912.1 · 63,432–63,548 bp · −
psbF · NC_063912.1 · 63,572–63,691 bp · −
psbE · NC_063912.1 · 63,706–63,957 bp · −
trnW-CCA · NC_063912.1 · 65,260–65,333 bp · −
trnP-UGG · NC_063912.1 · 65,504–65,577 bp · −
rpl20 · NC_063912.1 · 67,357–67,743 bp · −
rps12 · NC_063912.1 · 68,555–68,668 bp · −
rps12 · NC_063912.1 · 95,954–96,737 bp · −
clpP · NC_063912.1 · 68,792–70,703 bp · −
psbN · NC_063912.1 · 73,029–73,160 bp · −
rpoA · NC_063912.1 · 76,530–77,537 bp · −
rps11 · NC_063912.1 · 77,609–78,025 bp · −
rpl36 · NC_063912.1 · 78,135–78,248 bp · −
infA · NC_063912.1 · 78,344–78,577 bp · −
rps8 · NC_063912.1 · 78,704–79,108 bp · −
rpl14 · NC_063912.1 · 79,296–79,664 bp · −
rpl16 · NC_063912.1 · 79,796–81,074 bp · −
rps3 · NC_063912.1 · 81,210–81,872 bp · −
rpl22 · NC_063912.1 · 81,857–82,324 bp · −
rps19 · NC_063912.1 · 82,394–82,672 bp · −
rpl2 · NC_063912.1 · 82,732–84,214 bp · −
rpl23 · NC_063912.1 · 84,233–84,514 bp · −
trnI-CAU · NC_063912.1 · 84,680–84,753 bp · −
trnL-CAA · NC_063912.1 · 92,311–92,391 bp · −
ndhB · NC_063912.1 · 92,951–95,104 bp · −
rps7 · NC_063912.1 · 95,433–95,900 bp · −
trnN-GUU · NC_063912.1 · 106,730–106,801 bp · −
ndhF · NC_063912.1 · 108,155–110,389 bp · −
ndhD · NC_063912.1 · 113,079–114,620 bp · −
psaC · NC_063912.1 · 114,730–114,975 bp · −
ndhE · NC_063912.1 · 115,226–115,528 bp · −
ndhG · NC_063912.1 · 115,747–116,277 bp · −
ndhI · NC_063912.1 · 116,655–117,161 bp · −
ndhA · NC_063912.1 · 117,242–119,332 bp · −
ndhH · NC_063912.1 · 119,334–120,569 bp · −
rps15 · NC_063912.1 · 120,615–120,887 bp · −
ycf1 · NC_063912.1 · 121,313–126,940 bp · −
trnR-ACG · NC_063912.1 · 127,750–127,823 bp · −
rrn5 · NC_063912.1 · 128,067–128,187 bp · −
rrn4.5 · NC_063912.1 · 128,412–128,514 bp · −
rrn23 · NC_063912.1 · 128,615–131,423 bp · −
trnA-UGC · NC_063912.1 · 131,589–132,456 bp · −
trnI-GAU · NC_063912.1 · 132,521–133,532 bp · −
rrn16 · NC_063912.1 · 133,831–135,321 bp · −
trnV-GAC · NC_063912.1 · 135,548–135,619 bp · −
ycf15 · NC_063912.1 · 141,910–142,158 bp · −
ycf2 · NC_063912.1 · 142,249–149,118 bp · −
psbK · NC_063912.1 · 7,376–7,555 bp · +
psbI · NC_063912.1 · 7,952–8,062 bp · +
trnG-UCC · NC_063912.1 · 9,000–9,754 bp · +
trnR-UCU · NC_063912.1 · 9,937–10,008 bp · +
trnC-GCA · NC_063912.1 · 27,905–27,975 bp · +
petN · NC_063912.1 · 28,138–28,227 bp · +
trnT-GGU · NC_063912.1 · 30,778–30,849 bp · +
psbD · NC_063912.1 · 32,229–33,290 bp · +
psbC · NC_063912.1 · 33,238–34,659 bp · +
psbZ · NC_063912.1 · 35,332–35,520 bp · +
trnG-GCC · NC_063912.1 · 35,792–35,862 bp · +
trnS-GGA · NC_063912.1 · 44,661–44,747 bp · +
trnL-UAA · NC_063912.1 · 46,766–47,305 bp · +
trnF-GAA · NC_063912.1 · 47,604–47,676 bp · +
trnM-CAU · NC_063912.1 · 51,553–51,625 bp · +
rbcL · NC_063912.1 · 54,480–55,934 bp · +
accD · NC_063912.1 · 56,625–58,112 bp · +
psaI · NC_063912.1 · 58,586–58,696 bp · +
ycf4 · NC_063912.1 · 59,152–59,706 bp · +
cemA · NC_063912.1 · 60,254–60,943 bp · +
petA · NC_063912.1 · 61,149–62,111 bp · +
petL · NC_063912.1 · 64,758–64,853 bp · +
petG · NC_063912.1 · 65,032–65,145 bp · +
psaJ · NC_063912.1 · 65,829–66,002 bp · +
rpl33 · NC_063912.1 · 66,454–66,654 bp · +
rps18 · NC_063912.1 · 66,820–67,125 bp · +
rps12 · NC_063912.1 · 137,223–138,006 bp · +
psbB · NC_063912.1 · 71,163–72,689 bp · +
psbT · NC_063912.1 · 72,861–72,968 bp · +
psbH · NC_063912.1 · 73,266–73,487 bp · +
petB · NC_063912.1 · 73,613–74,963 bp · +
petD · NC_063912.1 · 75,157–76,353 bp · +
ycf2 · NC_063912.1 · 84,842–91,711 bp · +
ycf15 · NC_063912.1 · 91,802–92,050 bp · +
trnV-GAC · NC_063912.1 · 98,341–98,412 bp · +
rrn16 · NC_063912.1 · 98,639–100,129 bp · +
trnI-GAU · NC_063912.1 · 100,428–101,439 bp · +
trnA-UGC · NC_063912.1 · 101,504–102,371 bp · +
rrn23 · NC_063912.1 · 102,537–105,345 bp · +
rrn4.5 · NC_063912.1 · 105,446–105,548 bp · +
rrn5 · NC_063912.1 · 105,773–105,893 bp · +
trnR-ACG · NC_063912.1 · 106,137–106,210 bp · +
rpl32 · NC_063912.1 · 110,824–110,994 bp · +
trnL-UAG · NC_063912.1 · 111,699–111,778 bp · +
ccsA · NC_063912.1 · 111,823–112,848 bp · +
trnN-GUU · NC_063912.1 · 127,159–127,230 bp · +
rps7 · NC_063912.1 · 138,060–138,527 bp · +
ndhB · NC_063912.1 · 138,856–141,009 bp · +
trnL-CAA · NC_063912.1 · 141,569–141,649 bp · +
trnI-CAU · NC_063912.1 · 149,207–149,280 bp · +
rpl23 · NC_063912.1 · 149,446–149,727 bp · +
rpl2 · NC_063912.1 · 149,746–151,228 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Salvia dabieshanensis
ANNOTATED PLASTOME
NC_063912.1
151,330 bp · 132 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37832 75665 113498 151330 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU ATPA ATPF ATPH ATPI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC ATPE ATPB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
133 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 11 84 74 Locate
psbA gene − 392 1450 1059 Locate
trnK-UUU gene − 1672 4266 2595 Locate
matK gene − 1972 3534 1563 Locate
rps16 gene − 4830 5940 1111 Locate
trnQ-UUG gene − 6912 6983 72 Locate
psbK gene + 7376 7555 180 Locate
psbI gene + 7952 8062 111 Locate
trnS-GCU gene − 8216 8303 88 Locate
trnG-UCC gene + 9000 9754 755 Locate
trnR-UCU gene + 9937 10008 72 Locate
ATPA gene − 10120 11643 1524 Locate
ATPF gene − 11739 12986 1248 Locate
ATPH gene − 13260 13505 246 Locate
ATPI gene − 14475 15218 744 Locate
rps2 gene − 15445 16155 711 Locate
rpoC2 gene − 16365 20552 4188 Locate
rpoC1 gene − 20710 23523 2814 Locate
rpoB gene − 23550 26762 3213 Locate
trnC-GCA gene + 27905 27975 71 Locate
petN gene + 28138 28227 90 Locate
psbM gene − 29204 29308 105 Locate
trnD-GUC gene − 29828 29901 74 Locate
trnY-GUA gene − 30012 30095 84 Locate
trnE-UUC gene − 30167 30239 73 Locate
trnT-GGU gene + 30778 30849 72 Locate
psbD gene + 32229 33290 1062 Locate
psbC gene + 33238 34659 1422 Locate
trnS-UGA gene − 34905 34997 93 Locate
psbZ gene + 35332 35520 189 Locate
trnG-GCC gene + 35792 35862 71 Locate
trnfM-CAU gene − 35985 36058 74 Locate
rps14 gene − 36203 36505 303 Locate
psaB gene − 36628 38832 2205 Locate
psaA gene − 38858 41110 2253 Locate
ycf3 gene − 41894 43844 1951 Locate
trnS-GGA gene + 44661 44747 87 Locate
rps4 gene − 45024 45629 606 Locate
trnT-UGU gene − 46018 46090 73 Locate
trnL-UAA gene + 46766 47305 540 Locate
trnF-GAA gene + 47604 47676 73 Locate
ndhJ gene − 48209 48685 477 Locate
ndhK gene − 48796 49473 678 Locate
ndhC gene − 49526 49888 363 Locate
trnV-UAC gene − 50716 51364 649 Locate
trnM-CAU gene + 51553 51625 73 Locate
ATPE gene − 51821 52222 402 Locate
ATPB gene − 52219 53715 1497 Locate
rbcL gene + 54480 55934 1455 Locate
accD gene + 56625 58112 1488 Locate
psaI gene + 58586 58696 111 Locate
ycf4 gene + 59152 59706 555 Locate
cemA gene + 60254 60943 690 Locate
petA gene + 61149 62111 963 Locate
psbJ gene − 63180 63302 123 Locate
psbL gene − 63432 63548 117 Locate
psbF gene − 63572 63691 120 Locate
psbE gene − 63706 63957 252 Locate
petL gene + 64758 64853 96 Locate
petG gene + 65032 65145 114 Locate
trnW-CCA gene − 65260 65333 74 Locate
trnP-UGG gene − 65504 65577 74 Locate
psaJ gene + 65829 66002 174 Locate
rpl33 gene + 66454 66654 201 Locate
rps18 gene + 66820 67125 306 Locate
rpl20 gene − 67357 67743 387 Locate
rps12 gene − 68555 68668 114 Locate
clpP gene − 68792 70703 1912 Locate
psbB gene + 71163 72689 1527 Locate
psbT gene + 72861 72968 108 Locate
psbN gene − 73029 73160 132 Locate
psbH gene + 73266 73487 222 Locate
petB gene + 73613 74963 1351 Locate
petD gene + 75157 76353 1197 Locate
rpoA gene − 76530 77537 1008 Locate
rps11 gene − 77609 78025 417 Locate
rpl36 gene − 78135 78248 114 Locate
infA gene − 78344 78577 234 Locate
rps8 gene − 78704 79108 405 Locate
rpl14 gene − 79296 79664 369 Locate
rpl16 gene − 79796 81074 1279 Locate
rps3 gene − 81210 81872 663 Locate
rpl22 gene − 81857 82324 468 Locate
rps19 gene − 82394 82672 279 Locate
rpl2 gene − 82732 84214 1483 Locate
rpl23 gene − 84233 84514 282 Locate
trnI-CAU gene − 84680 84753 74 Locate
ycf2 gene + 84842 91711 6870 Locate
ycf15 gene + 91802 92050 249 Locate
trnL-CAA gene − 92311 92391 81 Locate
ndhB gene − 92951 95104 2154 Locate
rps7 gene − 95433 95900 468 Locate
rps12 gene − 95954 96737 784 Locate
trnV-GAC gene + 98341 98412 72 Locate
rrn16 gene + 98639 100129 1491 Locate
trnI-GAU gene + 100428 101439 1012 Locate
trnA-UGC gene + 101504 102371 868 Locate
rrn23 gene + 102537 105345 2809 Locate
rrn4.5 gene + 105446 105548 103 Locate
rrn5 gene + 105773 105893 121 Locate
trnR-ACG gene + 106137 106210 74 Locate
trnN-GUU gene − 106730 106801 72 Locate
ndhF gene − 108155 110389 2235 Locate
rpl32 gene + 110824 110994 171 Locate
trnL-UAG gene + 111699 111778 80 Locate
ccsA gene + 111823 112848 1026 Locate
ndhD gene − 113079 114620 1542 Locate
psaC gene − 114730 114975 246 Locate
ndhE gene − 115226 115528 303 Locate
ndhG gene − 115747 116277 531 Locate
ndhI gene − 116655 117161 507 Locate
ndhA gene − 117242 119332 2091 Locate
ndhH gene − 119334 120569 1236 Locate
rps15 gene − 120615 120887 273 Locate
ycf1 gene − 121313 126940 5628 Locate
trnN-GUU gene + 127159 127230 72 Locate
trnR-ACG gene − 127750 127823 74 Locate
rrn5 gene − 128067 128187 121 Locate
rrn4.5 gene − 128412 128514 103 Locate
rrn23 gene − 128615 131423 2809 Locate
trnA-UGC gene − 131589 132456 868 Locate
trnI-GAU gene − 132521 133532 1012 Locate
rrn16 gene − 133831 135321 1491 Locate
trnV-GAC gene − 135548 135619 72 Locate
rps12 gene + 137223 138006 784 Locate
rps7 gene + 138060 138527 468 Locate
ndhB gene + 138856 141009 2154 Locate
trnL-CAA gene + 141569 141649 81 Locate
ycf15 gene − 141910 142158 249 Locate
ycf2 gene − 142249 149118 6870 Locate
trnI-CAU gene + 149207 149280 74 Locate
rpl23 gene + 149446 149727 282 Locate
rpl2 gene + 149746 151228 1483 Locate
Status Available
Accession NC_063912.1
Length 151,330 bp
GC content 38.0%
Annotated genes 132
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 14 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources