Coordinate-aware organelle record

Salvia digitaloides chloroplast genome

Available NC_050895.1 152,159 bp 134 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

134 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	11	85	74
psbA	gene	photosystem-ii	−	394	1453	1059
trnK-UUU	gene	translation-rna	−	1684	4280	2596
matK	gene	other	−	2018	3548	1530
rps16	gene	ribosomal-protein	−	4854	5974	1120
trnQ-UUG	gene	translation-rna	−	6949	7021	72
psbK	gene	photosystem-ii	+	7391	7580	189
psbI	gene	photosystem-ii	+	7973	8084	111
trnS-GCU	gene	translation-rna	−	8240	8328	88
trnG-UCC	gene	translation-rna	+	9013	9766	753
trnR-UCU	gene	translation-rna	+	9959	10031	72
atpA	gene	atp-synthase	−	10139	11663	1524
atpF	gene	atp-synthase	−	11768	13011	1243
atpH	gene	atp-synthase	−	13277	13523	246
atpI	gene	atp-synthase	−	14524	15268	744
rps2	gene	ribosomal-protein	−	15492	16203	711
rpoC2	gene	rna-polymerase	−	16402	20581	4179
rpoC1	gene	rna-polymerase	−	20739	23553	2814
rpoB	gene	rna-polymerase	−	23579	26792	3213
trnC-GCA	gene	translation-rna	+	27935	28006	71
petN	gene	cytochrome	+	28176	28266	90
psbM	gene	photosystem-ii	−	28983	29088	105
trnD-GUC	gene	translation-rna	−	29609	29683	74
trnY-GUA	gene	translation-rna	−	29793	29877	84
trnE-UUC	gene	translation-rna	−	29942	30015	73
trnT-GGU	gene	translation-rna	+	30554	30626	72
psbD	gene	photosystem-ii	+	32003	33065	1062
psbC	gene	photosystem-ii	+	33012	34434	1422
trnS-UGA	gene	translation-rna	−	34679	34772	93
psbZ	gene	photosystem-ii	+	35106	35295	189
trnG-GCC	gene	translation-rna	+	35566	35637	71
trnfM-CAU	gene	translation-rna	−	35810	35884	74
rps14	gene	ribosomal-protein	−	36028	36331	303
psaB	gene	photosystem-i	−	36453	38658	2205
psaA	gene	photosystem-i	−	38683	40936	2253
ycf3	gene	other	−	41725	43686	1961
trnS-GGA	gene	translation-rna	+	44504	44591	87
rps4	gene	ribosomal-protein	−	44867	45473	606
trnT-UGU	gene	translation-rna	−	45845	45918	73
trnL-UAA	gene	translation-rna	+	46595	47136	541
trnF-GAA	gene	translation-rna	+	47434	47507	73
ndhJ	gene	nad-dehydrogenase	−	48044	48521	477
ndhK	gene	nad-dehydrogenase	−	48631	49309	678
ndhC	gene	nad-dehydrogenase	−	49360	49723	363
trnV-UAC	gene	translation-rna	−	50664	51313	649
trnM-CAU	gene	translation-rna	+	51493	51566	73
atpE	gene	atp-synthase	−	51776	52178	402
atpB	gene	atp-synthase	−	52174	53671	1497
rbcL	gene	other	+	54434	55889	1455
accD	gene	other	+	57369	58911	1542
psaI	gene	photosystem-i	+	59385	59496	111
ycf4	gene	other	+	59942	60497	555
cemA	gene	other	+	61110	61800	690
petA	gene	cytochrome	+	62020	62983	963
psbJ	gene	photosystem-ii	−	63979	64102	123
psbL	gene	photosystem-ii	−	64231	64453	222
psbF	gene	photosystem-ii	−	64371	64491	120
psbE	gene	photosystem-ii	−	64505	64757	252
petL	gene	cytochrome	+	65532	65628	96
petG	gene	cytochrome	+	65806	65920	114
trnW-CCA	gene	translation-rna	−	66034	66108	74
trnP-UGG	gene	translation-rna	−	66286	66360	74
psaJ	gene	photosystem-i	+	66649	66784	135
rpl33	gene	ribosomal-protein	+	67234	67435	201
rps18	gene	ribosomal-protein	+	67600	67906	306
rpl20	gene	ribosomal-protein	−	68137	68524	387
rps12	gene	ribosomal-protein	−	69321	97481	28160
rps12	gene	ribosomal-protein	+	69321	138872	69551
clpP	gene	other	−	69558	71478	1920
psbB	gene	photosystem-ii	+	71926	73453	1527
psbT	gene	photosystem-ii	+	73633	73741	108
psbN	gene	photosystem-ii	−	73801	73933	132
psbH	gene	photosystem-ii	+	74038	74260	222
petB	gene	cytochrome	+	74393	75737	1344
petD	gene	cytochrome	+	75930	77127	1197
rpoA	gene	rna-polymerase	−	77303	78311	1008
rps11	gene	ribosomal-protein	−	78382	78799	417
rpl36	gene	ribosomal-protein	−	78908	79022	114
infA	gene	other	−	79117	79351	234
rps8	gene	ribosomal-protein	−	79477	79882	405
rpl14	gene	ribosomal-protein	−	80066	80435	369
rpl16	gene	ribosomal-protein	−	80566	81844	1278
rps3	gene	ribosomal-protein	−	81979	82642	663
rpl22	gene	ribosomal-protein	−	82626	83094	468
rps19	gene	ribosomal-protein	−	83163	83442	279
rpl2	gene	ribosomal-protein	−	83501	84984	1483
rpl23	gene	ribosomal-protein	−	85002	85284	282
trnI-CAU	gene	translation-rna	−	85449	85523	74
ycf2	gene	other	+	85611	92445	6834
ycf15	gene	other	+	92520	92784	264
trnL-CAA	gene	translation-rna	−	93044	93125	81
ndhB	gene	nad-dehydrogenase	−	93684	95838	2154
rps7	gene	ribosomal-protein	−	96166	96634	468
trnV-GAC	gene	translation-rna	+	99101	99173	72
rrn16	gene	ribosomal-rna	+	99399	100890	1491
trnI-GAU	gene	translation-rna	+	101188	102201	1013
trnA-UGC	gene	translation-rna	+	102265	103142	877
rrn23	gene	ribosomal-rna	+	103307	106116	2809
rrn4.5	gene	ribosomal-rna	+	106216	106319	103
rrn5	gene	ribosomal-rna	+	106574	106695	121
trnR-ACG	gene	translation-rna	+	106938	107012	74
trnN-GUU	gene	translation-rna	−	107531	107603	72
ycf1	gene	other	+	107932	109090	1158
ndhF	gene	nad-dehydrogenase	−	108956	111191	2235
rpl32	gene	ribosomal-protein	+	111616	111787	171
trnL-UAG	gene	translation-rna	+	112497	112577	80
ccsA	gene	other	+	112621	113647	1026
ndhD	gene	nad-dehydrogenase	−	113876	115418	1542
psaC	gene	photosystem-i	−	115516	115762	246
ndhE	gene	nad-dehydrogenase	−	116013	116316	303
ndhG	gene	nad-dehydrogenase	−	116533	117064	531
ndhI	gene	nad-dehydrogenase	−	117446	117953	507
ndhA	gene	nad-dehydrogenase	−	118033	120130	2097
ndhH	gene	nad-dehydrogenase	−	120131	121367	1236
rps15	gene	ribosomal-protein	−	121412	121685	273
ycf1	gene	other	−	122092	127738	5646
trnN-GUU	gene	translation-rna	+	127956	128028	72
trnR-ACG	gene	translation-rna	−	128547	128621	74
rrn5	gene	ribosomal-rna	−	128864	128985	121
rrn4.5	gene	ribosomal-rna	−	129240	129343	103
rrn23	gene	ribosomal-rna	−	129443	132252	2809
trnA-UGC	gene	translation-rna	−	132417	133294	877
trnI-GAU	gene	translation-rna	−	133358	134371	1013
rrn16	gene	ribosomal-rna	−	134669	136160	1491
trnV-GAC	gene	translation-rna	−	136386	136458	72
rps7	gene	ribosomal-protein	+	138925	139393	468
ndhB	gene	nad-dehydrogenase	+	139721	141875	2154
trnL-CAA	gene	translation-rna	+	142434	142515	81
ycf15	gene	other	−	142775	143039	264
ycf2	gene	other	−	143114	149948	6834
trnI-CAU	gene	translation-rna	+	150036	150110	74
rpl23	gene	ribosomal-protein	+	150275	150557	282
rpl2	gene	ribosomal-protein	+	150575	152058	1483
rps19	gene	ribosomal-protein	+	152117	152159	42

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_050895.1DNA · accDNC_050895DNA · atpBNC_050895DNA · matKNC_050895DNA · ndhFNC_050895DNA · psbANC_050895DNA · rbcLNC_050895DNA · rps12NC_050895DNA · ycf1NC_050895