Salvia dorystaechas chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
LSC
IR
SSC
IR
trnH-GUG · NC_084050.1 · 2–75 bp · −
psbA · NC_084050.1 · 400–1,458 bp · −
trnK-UUU · NC_084050.1 · 1,698–4,291 bp · −
matK · NC_084050.1 · 2,019–3,554 bp · −
rps16 · NC_084050.1 · 4,864–5,961 bp · −
trnQ-UUG · NC_084050.1 · 6,943–7,014 bp · −
trnS-GCU · NC_084050.1 · 8,259–8,346 bp · −
atpA · NC_084050.1 · 10,154–11,677 bp · −
atpF · NC_084050.1 · 11,772–13,017 bp · −
atpH · NC_084050.1 · 13,290–13,535 bp · −
atpI · NC_084050.1 · 14,558–15,301 bp · −
rps2 · NC_084050.1 · 15,527–16,237 bp · −
rpoC2 · NC_084050.1 · 16,440–20,627 bp · −
rpoC1 · NC_084050.1 · 20,793–23,581 bp · −
rpoB · NC_084050.1 · 23,608–26,820 bp · −
psbM · NC_084050.1 · 29,259–29,363 bp · −
trnD-GUC · NC_084050.1 · 29,880–29,953 bp · −
trnY-GUA · NC_084050.1 · 30,064–30,147 bp · −
trnE-UUC · NC_084050.1 · 30,219–30,291 bp · −
trnS-UGA · NC_084050.1 · 34,989–35,081 bp · −
trnfM-CAU · NC_084050.1 · 36,100–36,173 bp · −
rps14 · NC_084050.1 · 36,318–36,620 bp · −
psaB · NC_084050.1 · 36,743–38,947 bp · −
psaA · NC_084050.1 · 38,973–41,225 bp · −
ycf3 · NC_084050.1 · 42,009–43,965 bp · −
rps4 · NC_084050.1 · 45,166–45,771 bp · −
trnT-UGU · NC_084050.1 · 46,129–46,201 bp · −
ndhJ · NC_084050.1 · 48,393–48,869 bp · −
ndhK · NC_084050.1 · 48,980–49,657 bp · −
ndhC · NC_084050.1 · 49,709–50,071 bp · −
trnV-UAC · NC_084050.1 · 51,014–51,659 bp · −
atpE · NC_084050.1 · 52,123–52,524 bp · −
atpB · NC_084050.1 · 52,521–54,017 bp · −
psbJ · NC_084050.1 · 63,534–63,656 bp · −
psbL · NC_084050.1 · 63,791–63,907 bp · −
psbF · NC_084050.1 · 63,931–64,050 bp · −
psbE · NC_084050.1 · 64,065–64,316 bp · −
trnW-CCA · NC_084050.1 · 65,711–65,784 bp · −
trnP-UGG · NC_084050.1 · 65,989–66,062 bp · −
rpl20 · NC_084050.1 · 67,850–68,236 bp · −
rps12 · NC_084050.1 · 69,044–69,157 bp · −
rps12 · NC_084050.1 · 96,449–97,232 bp · −
clpP · NC_084050.1 · 69,281–71,197 bp · −
psbN · NC_084050.1 · 73,520–73,651 bp · −
rpoA · NC_084050.1 · 77,034–78,041 bp · −
rps11 · NC_084050.1 · 78,112–78,528 bp · −
rpl36 · NC_084050.1 · 78,639–78,752 bp · −
infA · NC_084050.1 · 78,848–79,081 bp · −
rps8 · NC_084050.1 · 79,208–79,612 bp · −
rpl14 · NC_084050.1 · 79,791–80,159 bp · −
rpl16 · NC_084050.1 · 80,291–81,564 bp · −
rps3 · NC_084050.1 · 81,700–82,362 bp · −
rpl22 · NC_084050.1 · 82,347–82,820 bp · −
rps19 · NC_084050.1 · 82,890–83,168 bp · −
rpl2 · NC_084050.1 · 83,228–84,713 bp · −
rpl23 · NC_084050.1 · 84,732–85,013 bp · −
trnI-CAU · NC_084050.1 · 85,179–85,252 bp · −
trnL-CAA · NC_084050.1 · 92,798–92,878 bp · −
ndhB · NC_084050.1 · 93,446–95,599 bp · −
rps7 · NC_084050.1 · 95,928–96,395 bp · −
trnN-GUU · NC_084050.1 · 107,281–107,352 bp · −
ndhF · NC_084050.1 · 108,700–110,928 bp · −
ndhD · NC_084050.1 · 113,670–115,211 bp · −
psaC · NC_084050.1 · 115,308–115,553 bp · −
ndhE · NC_084050.1 · 115,799–116,101 bp · −
ndhG · NC_084050.1 · 116,316–116,846 bp · −
ndhI · NC_084050.1 · 117,233–117,739 bp · −
ndhA · NC_084050.1 · 117,820–119,919 bp · −
ndhH · NC_084050.1 · 119,921–121,156 bp · −
rps15 · NC_084050.1 · 121,202–121,474 bp · −
ycf1 · NC_084050.1 · 121,891–127,536 bp · −
trnR-ACG · NC_084050.1 · 128,325–128,398 bp · −
rrn5 · NC_084050.1 · 128,642–128,762 bp · −
rrn4.5 · NC_084050.1 · 129,018–129,120 bp · −
rrn23 · NC_084050.1 · 129,221–132,029 bp · −
trnA-UGC · NC_084050.1 · 132,197–133,073 bp · −
trnI-GAU · NC_084050.1 · 133,138–134,156 bp · −
rrn16 · NC_084050.1 · 134,455–135,945 bp · −
trnV-GAC · NC_084050.1 · 136,172–136,243 bp · −
ycf15 · NC_084050.1 · 142,570–142,818 bp · −
ycf2 · NC_084050.1 · 142,909–149,766 bp · −
psbK · NC_084050.1 · 7,401–7,586 bp · +
psbI · NC_084050.1 · 7,981–8,091 bp · +
trnG-UCC · NC_084050.1 · 9,039–9,794 bp · +
trnR-UCU · NC_084050.1 · 9,975–10,046 bp · +
trnC-GCA · NC_084050.1 · 27,973–28,043 bp · +
petN · NC_084050.1 · 28,199–28,288 bp · +
trnT-GGU · NC_084050.1 · 30,861–30,932 bp · +
psbD · NC_084050.1 · 32,313–33,374 bp · +
psbC · NC_084050.1 · 33,322–34,743 bp · +
psbZ · NC_084050.1 · 35,409–35,597 bp · +
trnG-GCC · NC_084050.1 · 35,875–35,945 bp · +
trnS-GGA · NC_084050.1 · 44,796–44,882 bp · +
trnL-UAA · NC_084050.1 · 46,899–47,482 bp · +
trnF-GAA · NC_084050.1 · 47,781–47,853 bp · +
trnM-CAU · NC_084050.1 · 51,840–51,912 bp · +
rbcL · NC_084050.1 · 54,790–56,256 bp · +
accD · NC_084050.1 · 56,928–58,382 bp · +
psaI · NC_084050.1 · 58,852–58,962 bp · +
ycf4 · NC_084050.1 · 59,407–59,961 bp · +
cemA · NC_084050.1 · 60,613–61,302 bp · +
petA · NC_084050.1 · 61,524–62,486 bp · +
petL · NC_084050.1 · 65,209–65,304 bp · +
petG · NC_084050.1 · 65,483–65,596 bp · +
psaJ · NC_084050.1 · 66,364–66,498 bp · +
rpl33 · NC_084050.1 · 66,939–67,139 bp · +
rps18 · NC_084050.1 · 67,312–67,617 bp · +
rps12 · NC_084050.1 · 137,875–138,658 bp · +
psbB · NC_084050.1 · 71,642–73,168 bp · +
psbT · NC_084050.1 · 73,353–73,454 bp · +
psbH · NC_084050.1 · 73,757–73,978 bp · +
petB · NC_084050.1 · 74,104–75,479 bp · +
petD · NC_084050.1 · 75,667–76,857 bp · +
ycf2 · NC_084050.1 · 85,341–92,198 bp · +
ycf15 · NC_084050.1 · 92,289–92,537 bp · +
trnV-GAC · NC_084050.1 · 98,864–98,935 bp · +
rrn16 · NC_084050.1 · 99,162–100,652 bp · +
trnI-GAU · NC_084050.1 · 100,951–101,969 bp · +
trnA-UGC · NC_084050.1 · 102,034–102,910 bp · +
rrn23 · NC_084050.1 · 103,078–105,886 bp · +
rrn4.5 · NC_084050.1 · 105,987–106,089 bp · +
rrn5 · NC_084050.1 · 106,345–106,465 bp · +
trnR-ACG · NC_084050.1 · 106,709–106,782 bp · +
ycf1 · NC_084050.1 · 107,571–108,731 bp · +
rpl32 · NC_084050.1 · 111,378–111,548 bp · +
trnL-UAG · NC_084050.1 · 112,288–112,367 bp · +
ccsA · NC_084050.1 · 112,464–113,441 bp · +
trnN-GUU · NC_084050.1 · 127,755–127,826 bp · +
rps7 · NC_084050.1 · 138,712–139,179 bp · +
ndhB · NC_084050.1 · 139,508–141,661 bp · +
trnL-CAA · NC_084050.1 · 142,229–142,309 bp · +
trnI-CAU · NC_084050.1 · 149,855–149,928 bp · +
rpl23 · NC_084050.1 · 150,094–150,375 bp · +
rpl2 · NC_084050.1 · 150,394–151,879 bp · +
rps19 · NC_084050.1 · 151,939–151,980 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Salvia dorystaechas
ANNOTATED PLASTOME
NC_084050.1
151,994 bp · 134 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37998 75997 113996 151994 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG ycf1 rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2 rps19
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
135 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 2 75 74 Locate
psbA gene − 400 1458 1059 Locate
trnK-UUU gene − 1698 4291 2594 Locate
matK gene − 2019 3554 1536 Locate
rps16 gene − 4864 5961 1098 Locate
trnQ-UUG gene − 6943 7014 72 Locate
psbK gene + 7401 7586 186 Locate
psbI gene + 7981 8091 111 Locate
trnS-GCU gene − 8259 8346 88 Locate
trnG-UCC gene + 9039 9794 756 Locate
trnR-UCU gene + 9975 10046 72 Locate
atpA gene − 10154 11677 1524 Locate
atpF gene − 11772 13017 1246 Locate
atpH gene − 13290 13535 246 Locate
atpI gene − 14558 15301 744 Locate
rps2 gene − 15527 16237 711 Locate
rpoC2 gene − 16440 20627 4188 Locate
rpoC1 gene − 20793 23581 2789 Locate
rpoB gene − 23608 26820 3213 Locate
trnC-GCA gene + 27973 28043 71 Locate
petN gene + 28199 28288 90 Locate
psbM gene − 29259 29363 105 Locate
trnD-GUC gene − 29880 29953 74 Locate
trnY-GUA gene − 30064 30147 84 Locate
trnE-UUC gene − 30219 30291 73 Locate
trnT-GGU gene + 30861 30932 72 Locate
psbD gene + 32313 33374 1062 Locate
psbC gene + 33322 34743 1422 Locate
trnS-UGA gene − 34989 35081 93 Locate
psbZ gene + 35409 35597 189 Locate
trnG-GCC gene + 35875 35945 71 Locate
trnfM-CAU gene − 36100 36173 74 Locate
rps14 gene − 36318 36620 303 Locate
psaB gene − 36743 38947 2205 Locate
psaA gene − 38973 41225 2253 Locate
ycf3 gene − 42009 43965 1957 Locate
trnS-GGA gene + 44796 44882 87 Locate
rps4 gene − 45166 45771 606 Locate
trnT-UGU gene − 46129 46201 73 Locate
trnL-UAA gene + 46899 47482 584 Locate
trnF-GAA gene + 47781 47853 73 Locate
ndhJ gene − 48393 48869 477 Locate
ndhK gene − 48980 49657 678 Locate
ndhC gene − 49709 50071 363 Locate
trnV-UAC gene − 51014 51659 646 Locate
trnM-CAU gene + 51840 51912 73 Locate
atpE gene − 52123 52524 402 Locate
atpB gene − 52521 54017 1497 Locate
rbcL gene + 54790 56256 1467 Locate
accD gene + 56928 58382 1455 Locate
psaI gene + 58852 58962 111 Locate
ycf4 gene + 59407 59961 555 Locate
cemA gene + 60613 61302 690 Locate
petA gene + 61524 62486 963 Locate
psbJ gene − 63534 63656 123 Locate
psbL gene − 63791 63907 117 Locate
psbF gene − 63931 64050 120 Locate
psbE gene − 64065 64316 252 Locate
petL gene + 65209 65304 96 Locate
petG gene + 65483 65596 114 Locate
trnW-CCA gene − 65711 65784 74 Locate
trnP-UGG gene − 65989 66062 74 Locate
psaJ gene + 66364 66498 135 Locate
rpl33 gene + 66939 67139 201 Locate
rps18 gene + 67312 67617 306 Locate
rpl20 gene − 67850 68236 387 Locate
rps12 gene − 69044 69157 114 Locate
clpP gene − 69281 71197 1917 Locate
psbB gene + 71642 73168 1527 Locate
psbT gene + 73353 73454 102 Locate
psbN gene − 73520 73651 132 Locate
psbH gene + 73757 73978 222 Locate
petB gene + 74104 75479 1376 Locate
petD gene + 75667 76857 1191 Locate
rpoA gene − 77034 78041 1008 Locate
rps11 gene − 78112 78528 417 Locate
rpl36 gene − 78639 78752 114 Locate
infA gene − 78848 79081 234 Locate
rps8 gene − 79208 79612 405 Locate
rpl14 gene − 79791 80159 369 Locate
rpl16 gene − 80291 81564 1274 Locate
rps3 gene − 81700 82362 663 Locate
rpl22 gene − 82347 82820 474 Locate
rps19 gene − 82890 83168 279 Locate
rpl2 gene − 83228 84713 1486 Locate
rpl23 gene − 84732 85013 282 Locate
trnI-CAU gene − 85179 85252 74 Locate
ycf2 gene + 85341 92198 6858 Locate
ycf15 gene + 92289 92537 249 Locate
trnL-CAA gene − 92798 92878 81 Locate
ndhB gene − 93446 95599 2154 Locate
rps7 gene − 95928 96395 468 Locate
rps12 gene − 96449 97232 784 Locate
trnV-GAC gene + 98864 98935 72 Locate
rrn16 gene + 99162 100652 1491 Locate
trnI-GAU gene + 100951 101969 1019 Locate
trnA-UGC gene + 102034 102910 877 Locate
rrn23 gene + 103078 105886 2809 Locate
rrn4.5 gene + 105987 106089 103 Locate
rrn5 gene + 106345 106465 121 Locate
trnR-ACG gene + 106709 106782 74 Locate
trnN-GUU gene − 107281 107352 72 Locate
ycf1 gene + 107571 108731 1161 Locate
ndhF gene − 108700 110928 2229 Locate
rpl32 gene + 111378 111548 171 Locate
trnL-UAG gene + 112288 112367 80 Locate
ccsA gene + 112464 113441 978 Locate
ndhD gene − 113670 115211 1542 Locate
psaC gene − 115308 115553 246 Locate
ndhE gene − 115799 116101 303 Locate
ndhG gene − 116316 116846 531 Locate
ndhI gene − 117233 117739 507 Locate
ndhA gene − 117820 119919 2100 Locate
ndhH gene − 119921 121156 1236 Locate
rps15 gene − 121202 121474 273 Locate
ycf1 gene − 121891 127536 5646 Locate
trnN-GUU gene + 127755 127826 72 Locate
trnR-ACG gene − 128325 128398 74 Locate
rrn5 gene − 128642 128762 121 Locate
rrn4.5 gene − 129018 129120 103 Locate
rrn23 gene − 129221 132029 2809 Locate
trnA-UGC gene − 132197 133073 877 Locate
trnI-GAU gene − 133138 134156 1019 Locate
rrn16 gene − 134455 135945 1491 Locate
trnV-GAC gene − 136172 136243 72 Locate
rps12 gene + 137875 138658 784 Locate
rps7 gene + 138712 139179 468 Locate
ndhB gene + 139508 141661 2154 Locate
trnL-CAA gene + 142229 142309 81 Locate
ycf15 gene − 142570 142818 249 Locate
ycf2 gene − 142909 149766 6858 Locate
trnI-CAU gene + 149855 149928 74 Locate
rpl23 gene + 150094 150375 282 Locate
rpl2 gene + 150394 151879 1486 Locate
rps19 gene + 151939 151980 42 Locate
Status Available
Accession NC_084050.1
Length 151,994 bp
GC content 38.0%
Annotated genes 134
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 15 Ribosomal Protein 27 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources