Coordinate-aware organelle record

Salvia forsskaolei chloroplast genome

Available NC_084047.1 151,745 bp 134 coordinate-linked features
LSCIRSSCIR0 kb13 kb26 kb39 kb52 kb65 kb78 kb91 kb104 kb117 kb130 kb143 kbtrnH-GUG · gene · 9-82 bp · − strandpsbA · gene · 368-1,426 bp · − strandtrnK-UUU · gene · 1,658-4,247 bp · − strandmatK · gene · 1,970-3,499 bp · − strandrps16 · gene · 4,813-5,923 bp · − strandtrnQ-UUG · gene · 6,490-6,561 bp · − strandpsbK · gene · 6,955-7,134 bp · + strandpsbI · gene · 7,526-7,636 bp · + strandtrnS-GCU · gene · 7,776-7,863 bp · − strandtrnG-UCC · gene · 8,575-9,330 bp · + strandtrnR-UCU · gene · 9,511-9,582 bp · + strandatpA · gene · 9,688-11,211 bp · − strandatpF · gene · 11,308-12,559 bp · − strandatpH · gene · 12,839-13,084 bp · − strandatpI · gene · 14,136-14,879 bp · − strandrps2 · gene · 15,112-15,822 bp · − strandrpoC2 · gene · 16,040-20,227 bp · − strandrpoC1 · gene · 20,392-23,214 bp · − strandrpoB · gene · 23,241-26,453 bp · − strandtrnC-GCA · gene · 27,594-27,664 bp · + strandpetN · gene · 27,828-27,917 bp · + strandpsbM · gene · 28,908-29,012 bp · − strandtrnD-GUC · gene · 29,531-29,604 bp · − strandtrnY-GUA · gene · 29,715-29,798 bp · − strandtrnE-UUC · gene · 29,868-29,940 bp · − strandtrnT-GGU · gene · 30,525-30,596 bp · + strandpsbD · gene · 31,862-32,923 bp · + strandpsbC · gene · 32,871-34,292 bp · + strandtrnS-UGA · gene · 34,536-34,628 bp · − strandpsbZ · gene · 34,964-35,152 bp · + strandtrnG-GCC · gene · 35,432-35,502 bp · + strandtrnfM-CAU · gene · 35,681-35,754 bp · − strandrps14 · gene · 35,899-36,201 bp · − strandpsaB · gene · 36,324-38,528 bp · − strandpsaA · gene · 38,554-40,806 bp · − strandycf3 · gene · 41,605-43,566 bp · − strandtrnS-GGA · gene · 44,452-44,538 bp · + strandrps4 · gene · 44,810-45,415 bp · − strandtrnT-UGU · gene · 45,766-45,838 bp · − strandtrnL-UAA · gene · 46,529-47,106 bp · + strandtrnF-GAA · gene · 47,390-47,462 bp · + strandndhJ · gene · 48,103-48,579 bp · − strandndhK · gene · 48,690-49,448 bp · − strandndhC · gene · 49,418-49,780 bp · − strandtrnV-UAC · gene · 50,732-51,380 bp · − strandtrnM-CAU · gene · 51,561-51,633 bp · + strandatpE · gene · 51,844-52,245 bp · − strandatpB · gene · 52,242-53,738 bp · − strandrbcL · gene · 54,529-55,983 bp · + strandaccD · gene · 56,682-58,169 bp · + strandpsaI · gene · 58,654-58,764 bp · + strandycf4 · gene · 59,209-59,763 bp · + strandcemA · gene · 60,436-61,125 bp · + strandpetA · gene · 61,333-62,295 bp · + strandpsbJ · gene · 63,317-63,439 bp · − strandpsbL · gene · 63,569-63,685 bp · − strandpsbF · gene · 63,709-63,828 bp · − strandpsbE · gene · 63,843-64,094 bp · − strandpetL · gene · 65,003-65,098 bp · + strandpetG · gene · 65,277-65,390 bp · + strandtrnW-CCA · gene · 65,506-65,579 bp · − strandtrnP-UGG · gene · 65,758-65,831 bp · − strandpsaJ · gene · 66,052-66,240 bp · + strandrpl33 · gene · 66,675-66,875 bp · + strandrps18 · gene · 67,046-67,351 bp · + strandrpl20 · gene · 67,584-67,970 bp · − strandrps12 · gene · 68,767-96,969 bp · − strandrps12 · gene · 68,767-138,451 bp · + strandclpP · gene · 69,003-70,938 bp · − strandpsbB · gene · 71,392-72,918 bp · + strandpsbT · gene · 73,102-73,209 bp · + strandpsbN · gene · 73,270-73,401 bp · − strandpsbH · gene · 73,507-73,728 bp · + strandpetB · gene · 73,854-75,230 bp · + strandpetD · gene · 75,418-76,608 bp · + strandrpoA · gene · 76,785-77,792 bp · − strandrps11 · gene · 77,863-78,279 bp · − strandrpl36 · gene · 78,389-78,502 bp · − strandinfA · gene · 78,598-78,831 bp · − strandrps8 · gene · 78,952-79,356 bp · − strandrpl14 · gene · 79,533-79,901 bp · − strandrpl16 · gene · 80,030-81,310 bp · − strandrps3 · gene · 81,464-82,126 bp · − strandrpl22 · gene · 82,111-82,578 bp · − strandrps19 · gene · 82,648-82,926 bp · − strandrpl2 · gene · 82,987-84,474 bp · − strandrpl23 · gene · 84,493-84,774 bp · − strandtrnI-CAU · gene · 84,940-85,013 bp · − strandycf2 · gene · 85,102-91,941 bp · + strandycf15 · gene · 92,032-92,280 bp · + strandtrnL-CAA · gene · 92,541-92,621 bp · − strandndhB · gene · 93,173-95,326 bp · − strandrps7 · gene · 95,655-96,122 bp · − strandtrnV-GAC · gene · 98,590-98,661 bp · + strandrrn16 · gene · 98,888-100,378 bp · + strandtrnI-GAU · gene · 100,677-101,696 bp · + strandtrnA-UGC · gene · 101,769-102,646 bp · + strandrrn23 · gene · 102,810-105,620 bp · + strandrrn4.5 · gene · 105,721-105,823 bp · + strandrrn5 · gene · 106,073-106,193 bp · + strandtrnR-ACG · gene · 106,443-106,516 bp · + strandtrnN-GUU · gene · 107,035-107,106 bp · − strandycf1 · gene · 107,325-108,501 bp · + strandndhF · gene · 108,466-110,697 bp · − strandrpl32 · gene · 111,145-111,342 bp · + strandtrnL-UAG · gene · 112,068-112,147 bp · + strandccsA · gene · 112,197-113,216 bp · + strandndhD · gene · 113,445-114,986 bp · − strandpsaC · gene · 115,083-115,328 bp · − strandndhE · gene · 115,583-115,885 bp · − strandndhG · gene · 116,103-116,633 bp · − strandndhI · gene · 117,020-117,526 bp · − strandndhA · gene · 117,607-119,705 bp · − strandndhH · gene · 119,707-120,942 bp · − strandrps15 · gene · 120,988-121,260 bp · − strandycf1 · gene · 121,654-127,302 bp · − strandtrnN-GUU · gene · 127,521-127,592 bp · + strandtrnR-ACG · gene · 128,111-128,184 bp · − strandrrn5 · gene · 128,434-128,554 bp · − strandrrn4.5 · gene · 128,804-128,906 bp · − strandrrn23 · gene · 129,007-131,817 bp · − strandtrnA-UGC · gene · 131,981-132,858 bp · − strandtrnI-GAU · gene · 132,931-133,950 bp · − strandrrn16 · gene · 134,249-135,739 bp · − strandtrnV-GAC · gene · 135,966-136,037 bp · − strandrps7 · gene · 138,505-138,972 bp · + strandndhB · gene · 139,301-141,454 bp · + strandtrnL-CAA · gene · 142,006-142,086 bp · + strandycf15 · gene · 142,347-142,595 bp · − strandycf2 · gene · 142,686-149,525 bp · − strandtrnI-CAU · gene · 149,614-149,687 bp · + strandrpl23 · gene · 149,853-150,134 bp · + strandrpl2 · gene · 150,153-151,640 bp · + strandrps19 · gene · 151,701-151,742 bp · + strandSalvia forsskaoleiANNOTATED PLASTOMENC_084047.1151,745 bp · 134 genesOuter ring: forward strand · inner ring: reverse strand · click a gene to open its pageGene functionTranslation RnaPhotosystem IiOtherRibosomal ProteinAtp SynthaseRna PolymeraseCytochromePhotosystem INad DehydrogenaseRibosomal RnaVerified annotationSource: NCBI GenBankAccession: NC_084047.1Features: 134 coordinate-linked genesHover for coordinates · click for gene page

Gene-position browser

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134 features
GeneTypeGroupStrandStartEndLength
trnH-GUGgenetranslation-rna−88274
psbAgenephotosystem-ii−36714261059
trnK-UUUgenetranslation-rna−165742472590
matKgeneother−196934991530
rps16generibosomal-protein−481259231111
trnQ-UUGgenetranslation-rna−6489656172
psbKgenephotosystem-ii+69547134180
psbIgenephotosystem-ii+75257636111
trnS-GCUgenetranslation-rna−7775786388
trnG-UCCgenetranslation-rna+85749330756
trnR-UCUgenetranslation-rna+9510958272
atpAgeneatp-synthase−9687112111524
atpFgeneatp-synthase−11307125591252
atpHgeneatp-synthase−1283813084246
atpIgeneatp-synthase−1413514879744
rps2generibosomal-protein−1511115822711
rpoC2generna-polymerase−16039202274188
rpoC1generna-polymerase−20391232142823
rpoBgenerna-polymerase−23240264533213
trnC-GCAgenetranslation-rna+275932766471
petNgenecytochrome+278272791790
psbMgenephotosystem-ii−2890729012105
trnD-GUCgenetranslation-rna−295302960474
trnY-GUAgenetranslation-rna−297142979884
trnE-UUCgenetranslation-rna−298672994073
trnT-GGUgenetranslation-rna+305243059672
psbDgenephotosystem-ii+31861329231062
psbCgenephotosystem-ii+32870342921422
trnS-UGAgenetranslation-rna−345353462893
psbZgenephotosystem-ii+3496335152189
trnG-GCCgenetranslation-rna+354313550271
trnfM-CAUgenetranslation-rna−356803575474
rps14generibosomal-protein−3589836201303
psaBgenephotosystem-i−36323385282205
psaAgenephotosystem-i−38553408062253
ycf3geneother−41604435661962
trnS-GGAgenetranslation-rna+444514453887
rps4generibosomal-protein−4480945415606
trnT-UGUgenetranslation-rna−457654583873
trnL-UAAgenetranslation-rna+4652847106578
trnF-GAAgenetranslation-rna+473894746273
ndhJgenenad-dehydrogenase−4810248579477
ndhKgenenad-dehydrogenase−4868949448759
ndhCgenenad-dehydrogenase−4941749780363
trnV-UACgenetranslation-rna−5073151380649
trnM-CAUgenetranslation-rna+515605163373
atpEgeneatp-synthase−5184352245402
atpBgeneatp-synthase−52241537381497
rbcLgeneother+54528559831455
accDgeneother+56681581691488
psaIgenephotosystem-i+5865358764111
ycf4geneother+5920859763555
cemAgeneother+6043561125690
petAgenecytochrome+6133262295963
psbJgenephotosystem-ii−6331663439123
psbLgenephotosystem-ii−6356863685117
psbFgenephotosystem-ii−6370863828120
psbEgenephotosystem-ii−6384264094252
petLgenecytochrome+650026509896
petGgenecytochrome+6527665390114
trnW-CCAgenetranslation-rna−655056557974
trnP-UGGgenetranslation-rna−657576583174
psaJgenephotosystem-i+6605166240189
rpl33generibosomal-protein+6667466875201
rps18generibosomal-protein+6704567351306
rpl20generibosomal-protein−6758367970387
rps12generibosomal-protein−687669696928203
rps12generibosomal-protein+6876613845169685
clpPgeneother−69002709381936
psbBgenephotosystem-ii+71391729181527
psbTgenephotosystem-ii+7310173209108
psbNgenephotosystem-ii−7326973401132
psbHgenephotosystem-ii+7350673728222
petBgenecytochrome+73853752301377
petDgenecytochrome+75417766081191
rpoAgenerna-polymerase−76784777921008
rps11generibosomal-protein−7786278279417
rpl36generibosomal-protein−7838878502114
infAgeneother−7859778831234
rps8generibosomal-protein−7895179356405
rpl14generibosomal-protein−7953279901369
rpl16generibosomal-protein−80029813101281
rps3generibosomal-protein−8146382126663
rpl22generibosomal-protein−8211082578468
rps19generibosomal-protein−8264782926279
rpl2generibosomal-protein−82986844741488
rpl23generibosomal-protein−8449284774282
trnI-CAUgenetranslation-rna−849398501374
ycf2geneother+85101919416840
ycf15geneother+9203192280249
trnL-CAAgenetranslation-rna−925409262181
ndhBgenenad-dehydrogenase−93172953262154
rps7generibosomal-protein−9565496122468
trnV-GACgenetranslation-rna+985899866172
rrn16generibosomal-rna+988871003781491
trnI-GAUgenetranslation-rna+1006761016961020
trnA-UGCgenetranslation-rna+101768102646878
rrn23generibosomal-rna+1028091056202811
rrn4.5generibosomal-rna+105720105823103
rrn5generibosomal-rna+106072106193121
trnR-ACGgenetranslation-rna+10644210651674
trnN-GUUgenetranslation-rna−10703410710672
ycf1geneother+1073241085011177
ndhFgenenad-dehydrogenase−1084651106972232
rpl32generibosomal-protein+111144111342198
trnL-UAGgenetranslation-rna+11206711214780
ccsAgeneother+1121961132161020
ndhDgenenad-dehydrogenase−1134441149861542
psaCgenephotosystem-i−115082115328246
ndhEgenenad-dehydrogenase−115582115885303
ndhGgenenad-dehydrogenase−116102116633531
ndhIgenenad-dehydrogenase−117019117526507
ndhAgenenad-dehydrogenase−1176061197052099
ndhHgenenad-dehydrogenase−1197061209421236
rps15generibosomal-protein−120987121260273
ycf1geneother−1216531273025649
trnN-GUUgenetranslation-rna+12752012759272
trnR-ACGgenetranslation-rna−12811012818474
rrn5generibosomal-rna−128433128554121
rrn4.5generibosomal-rna−128803128906103
rrn23generibosomal-rna−1290061318172811
trnA-UGCgenetranslation-rna−131980132858878
trnI-GAUgenetranslation-rna−1329301339501020
rrn16generibosomal-rna−1342481357391491
trnV-GACgenetranslation-rna−13596513603772
rps7generibosomal-protein+138504138972468
ndhBgenenad-dehydrogenase+1393001414542154
trnL-CAAgenetranslation-rna+14200514208681
ycf15geneother−142346142595249
ycf2geneother−1426851495256840
trnI-CAUgenetranslation-rna+14961314968774
rpl23generibosomal-protein+149852150134282
rpl2generibosomal-protein+1501521516401488
rps19generibosomal-protein+15170015174242

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources