Salvia forsskaolei chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
LSC
IR
SSC
IR
trnH-GUG · NC_084047.1 · 9–82 bp · −
psbA · NC_084047.1 · 368–1,426 bp · −
trnK-UUU · NC_084047.1 · 1,658–4,247 bp · −
matK · NC_084047.1 · 1,970–3,499 bp · −
rps16 · NC_084047.1 · 4,813–5,923 bp · −
trnQ-UUG · NC_084047.1 · 6,490–6,561 bp · −
trnS-GCU · NC_084047.1 · 7,776–7,863 bp · −
atpA · NC_084047.1 · 9,688–11,211 bp · −
atpF · NC_084047.1 · 11,308–12,559 bp · −
atpH · NC_084047.1 · 12,839–13,084 bp · −
atpI · NC_084047.1 · 14,136–14,879 bp · −
rps2 · NC_084047.1 · 15,112–15,822 bp · −
rpoC2 · NC_084047.1 · 16,040–20,227 bp · −
rpoC1 · NC_084047.1 · 20,392–23,214 bp · −
rpoB · NC_084047.1 · 23,241–26,453 bp · −
psbM · NC_084047.1 · 28,908–29,012 bp · −
trnD-GUC · NC_084047.1 · 29,531–29,604 bp · −
trnY-GUA · NC_084047.1 · 29,715–29,798 bp · −
trnE-UUC · NC_084047.1 · 29,868–29,940 bp · −
trnS-UGA · NC_084047.1 · 34,536–34,628 bp · −
trnfM-CAU · NC_084047.1 · 35,681–35,754 bp · −
rps14 · NC_084047.1 · 35,899–36,201 bp · −
psaB · NC_084047.1 · 36,324–38,528 bp · −
psaA · NC_084047.1 · 38,554–40,806 bp · −
ycf3 · NC_084047.1 · 41,605–43,566 bp · −
rps4 · NC_084047.1 · 44,810–45,415 bp · −
trnT-UGU · NC_084047.1 · 45,766–45,838 bp · −
ndhJ · NC_084047.1 · 48,103–48,579 bp · −
ndhK · NC_084047.1 · 48,690–49,448 bp · −
ndhC · NC_084047.1 · 49,418–49,780 bp · −
trnV-UAC · NC_084047.1 · 50,732–51,380 bp · −
atpE · NC_084047.1 · 51,844–52,245 bp · −
atpB · NC_084047.1 · 52,242–53,738 bp · −
psbJ · NC_084047.1 · 63,317–63,439 bp · −
psbL · NC_084047.1 · 63,569–63,685 bp · −
psbF · NC_084047.1 · 63,709–63,828 bp · −
psbE · NC_084047.1 · 63,843–64,094 bp · −
trnW-CCA · NC_084047.1 · 65,506–65,579 bp · −
trnP-UGG · NC_084047.1 · 65,758–65,831 bp · −
rpl20 · NC_084047.1 · 67,584–67,970 bp · −
rps12 · NC_084047.1 · 68,767–68,880 bp · −
rps12 · NC_084047.1 · 96,176–96,969 bp · −
clpP · NC_084047.1 · 69,003–70,938 bp · −
psbN · NC_084047.1 · 73,270–73,401 bp · −
rpoA · NC_084047.1 · 76,785–77,792 bp · −
rps11 · NC_084047.1 · 77,863–78,279 bp · −
rpl36 · NC_084047.1 · 78,389–78,502 bp · −
infA · NC_084047.1 · 78,598–78,831 bp · −
rps8 · NC_084047.1 · 78,952–79,356 bp · −
rpl14 · NC_084047.1 · 79,533–79,901 bp · −
rpl16 · NC_084047.1 · 80,030–81,310 bp · −
rps3 · NC_084047.1 · 81,464–82,126 bp · −
rpl22 · NC_084047.1 · 82,111–82,578 bp · −
rps19 · NC_084047.1 · 82,648–82,926 bp · −
rpl2 · NC_084047.1 · 82,987–84,474 bp · −
rpl23 · NC_084047.1 · 84,493–84,774 bp · −
trnI-CAU · NC_084047.1 · 84,940–85,013 bp · −
trnL-CAA · NC_084047.1 · 92,541–92,621 bp · −
ndhB · NC_084047.1 · 93,173–95,326 bp · −
rps7 · NC_084047.1 · 95,655–96,122 bp · −
trnN-GUU · NC_084047.1 · 107,035–107,106 bp · −
ndhF · NC_084047.1 · 108,466–110,697 bp · −
ndhD · NC_084047.1 · 113,445–114,986 bp · −
psaC · NC_084047.1 · 115,083–115,328 bp · −
ndhE · NC_084047.1 · 115,583–115,885 bp · −
ndhG · NC_084047.1 · 116,103–116,633 bp · −
ndhI · NC_084047.1 · 117,020–117,526 bp · −
ndhA · NC_084047.1 · 117,607–119,705 bp · −
ndhH · NC_084047.1 · 119,707–120,942 bp · −
rps15 · NC_084047.1 · 120,988–121,260 bp · −
ycf1 · NC_084047.1 · 121,654–127,302 bp · −
trnR-ACG · NC_084047.1 · 128,111–128,184 bp · −
rrn5 · NC_084047.1 · 128,434–128,554 bp · −
rrn4.5 · NC_084047.1 · 128,804–128,906 bp · −
rrn23 · NC_084047.1 · 129,007–131,817 bp · −
trnA-UGC · NC_084047.1 · 131,981–132,858 bp · −
trnI-GAU · NC_084047.1 · 132,931–133,950 bp · −
rrn16 · NC_084047.1 · 134,249–135,739 bp · −
trnV-GAC · NC_084047.1 · 135,966–136,037 bp · −
ycf15 · NC_084047.1 · 142,347–142,595 bp · −
ycf2 · NC_084047.1 · 142,686–149,525 bp · −
psbK · NC_084047.1 · 6,955–7,134 bp · +
psbI · NC_084047.1 · 7,526–7,636 bp · +
trnG-UCC · NC_084047.1 · 8,575–9,330 bp · +
trnR-UCU · NC_084047.1 · 9,511–9,582 bp · +
trnC-GCA · NC_084047.1 · 27,594–27,664 bp · +
petN · NC_084047.1 · 27,828–27,917 bp · +
trnT-GGU · NC_084047.1 · 30,525–30,596 bp · +
psbD · NC_084047.1 · 31,862–32,923 bp · +
psbC · NC_084047.1 · 32,871–34,292 bp · +
psbZ · NC_084047.1 · 34,964–35,152 bp · +
trnG-GCC · NC_084047.1 · 35,432–35,502 bp · +
trnS-GGA · NC_084047.1 · 44,452–44,538 bp · +
trnL-UAA · NC_084047.1 · 46,529–47,106 bp · +
trnF-GAA · NC_084047.1 · 47,390–47,462 bp · +
trnM-CAU · NC_084047.1 · 51,561–51,633 bp · +
rbcL · NC_084047.1 · 54,529–55,983 bp · +
accD · NC_084047.1 · 56,682–58,169 bp · +
psaI · NC_084047.1 · 58,654–58,764 bp · +
ycf4 · NC_084047.1 · 59,209–59,763 bp · +
cemA · NC_084047.1 · 60,436–61,125 bp · +
petA · NC_084047.1 · 61,333–62,295 bp · +
petL · NC_084047.1 · 65,003–65,098 bp · +
petG · NC_084047.1 · 65,277–65,390 bp · +
psaJ · NC_084047.1 · 66,052–66,240 bp · +
rpl33 · NC_084047.1 · 66,675–66,875 bp · +
rps18 · NC_084047.1 · 67,046–67,351 bp · +
rps12 · NC_084047.1 · 137,658–138,451 bp · +
psbB · NC_084047.1 · 71,392–72,918 bp · +
psbT · NC_084047.1 · 73,102–73,209 bp · +
psbH · NC_084047.1 · 73,507–73,728 bp · +
petB · NC_084047.1 · 73,854–75,230 bp · +
petD · NC_084047.1 · 75,418–76,608 bp · +
ycf2 · NC_084047.1 · 85,102–91,941 bp · +
ycf15 · NC_084047.1 · 92,032–92,280 bp · +
trnV-GAC · NC_084047.1 · 98,590–98,661 bp · +
rrn16 · NC_084047.1 · 98,888–100,378 bp · +
trnI-GAU · NC_084047.1 · 100,677–101,696 bp · +
trnA-UGC · NC_084047.1 · 101,769–102,646 bp · +
rrn23 · NC_084047.1 · 102,810–105,620 bp · +
rrn4.5 · NC_084047.1 · 105,721–105,823 bp · +
rrn5 · NC_084047.1 · 106,073–106,193 bp · +
trnR-ACG · NC_084047.1 · 106,443–106,516 bp · +
ycf1 · NC_084047.1 · 107,325–108,501 bp · +
rpl32 · NC_084047.1 · 111,145–111,342 bp · +
trnL-UAG · NC_084047.1 · 112,068–112,147 bp · +
ccsA · NC_084047.1 · 112,197–113,216 bp · +
trnN-GUU · NC_084047.1 · 127,521–127,592 bp · +
rps7 · NC_084047.1 · 138,505–138,972 bp · +
ndhB · NC_084047.1 · 139,301–141,454 bp · +
trnL-CAA · NC_084047.1 · 142,006–142,086 bp · +
trnI-CAU · NC_084047.1 · 149,614–149,687 bp · +
rpl23 · NC_084047.1 · 149,853–150,134 bp · +
rpl2 · NC_084047.1 · 150,153–151,640 bp · +
rps19 · NC_084047.1 · 151,701–151,742 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Salvia forsskaolei
ANNOTATED PLASTOME
NC_084047.1
151,745 bp · 134 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37936 75872 113809 151745 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG ycf1 rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2 rps19
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
135 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 9 82 74 Locate
psbA gene − 368 1426 1059 Locate
trnK-UUU gene − 1658 4247 2590 Locate
matK gene − 1970 3499 1530 Locate
rps16 gene − 4813 5923 1111 Locate
trnQ-UUG gene − 6490 6561 72 Locate
psbK gene + 6955 7134 180 Locate
psbI gene + 7526 7636 111 Locate
trnS-GCU gene − 7776 7863 88 Locate
trnG-UCC gene + 8575 9330 756 Locate
trnR-UCU gene + 9511 9582 72 Locate
atpA gene − 9688 11211 1524 Locate
atpF gene − 11308 12559 1252 Locate
atpH gene − 12839 13084 246 Locate
atpI gene − 14136 14879 744 Locate
rps2 gene − 15112 15822 711 Locate
rpoC2 gene − 16040 20227 4188 Locate
rpoC1 gene − 20392 23214 2823 Locate
rpoB gene − 23241 26453 3213 Locate
trnC-GCA gene + 27594 27664 71 Locate
petN gene + 27828 27917 90 Locate
psbM gene − 28908 29012 105 Locate
trnD-GUC gene − 29531 29604 74 Locate
trnY-GUA gene − 29715 29798 84 Locate
trnE-UUC gene − 29868 29940 73 Locate
trnT-GGU gene + 30525 30596 72 Locate
psbD gene + 31862 32923 1062 Locate
psbC gene + 32871 34292 1422 Locate
trnS-UGA gene − 34536 34628 93 Locate
psbZ gene + 34964 35152 189 Locate
trnG-GCC gene + 35432 35502 71 Locate
trnfM-CAU gene − 35681 35754 74 Locate
rps14 gene − 35899 36201 303 Locate
psaB gene − 36324 38528 2205 Locate
psaA gene − 38554 40806 2253 Locate
ycf3 gene − 41605 43566 1962 Locate
trnS-GGA gene + 44452 44538 87 Locate
rps4 gene − 44810 45415 606 Locate
trnT-UGU gene − 45766 45838 73 Locate
trnL-UAA gene + 46529 47106 578 Locate
trnF-GAA gene + 47390 47462 73 Locate
ndhJ gene − 48103 48579 477 Locate
ndhK gene − 48690 49448 759 Locate
ndhC gene − 49418 49780 363 Locate
trnV-UAC gene − 50732 51380 649 Locate
trnM-CAU gene + 51561 51633 73 Locate
atpE gene − 51844 52245 402 Locate
atpB gene − 52242 53738 1497 Locate
rbcL gene + 54529 55983 1455 Locate
accD gene + 56682 58169 1488 Locate
psaI gene + 58654 58764 111 Locate
ycf4 gene + 59209 59763 555 Locate
cemA gene + 60436 61125 690 Locate
petA gene + 61333 62295 963 Locate
psbJ gene − 63317 63439 123 Locate
psbL gene − 63569 63685 117 Locate
psbF gene − 63709 63828 120 Locate
psbE gene − 63843 64094 252 Locate
petL gene + 65003 65098 96 Locate
petG gene + 65277 65390 114 Locate
trnW-CCA gene − 65506 65579 74 Locate
trnP-UGG gene − 65758 65831 74 Locate
psaJ gene + 66052 66240 189 Locate
rpl33 gene + 66675 66875 201 Locate
rps18 gene + 67046 67351 306 Locate
rpl20 gene − 67584 67970 387 Locate
rps12 gene − 68767 68880 114 Locate
clpP gene − 69003 70938 1936 Locate
psbB gene + 71392 72918 1527 Locate
psbT gene + 73102 73209 108 Locate
psbN gene − 73270 73401 132 Locate
psbH gene + 73507 73728 222 Locate
petB gene + 73854 75230 1377 Locate
petD gene + 75418 76608 1191 Locate
rpoA gene − 76785 77792 1008 Locate
rps11 gene − 77863 78279 417 Locate
rpl36 gene − 78389 78502 114 Locate
infA gene − 78598 78831 234 Locate
rps8 gene − 78952 79356 405 Locate
rpl14 gene − 79533 79901 369 Locate
rpl16 gene − 80030 81310 1281 Locate
rps3 gene − 81464 82126 663 Locate
rpl22 gene − 82111 82578 468 Locate
rps19 gene − 82648 82926 279 Locate
rpl2 gene − 82987 84474 1488 Locate
rpl23 gene − 84493 84774 282 Locate
trnI-CAU gene − 84940 85013 74 Locate
ycf2 gene + 85102 91941 6840 Locate
ycf15 gene + 92032 92280 249 Locate
trnL-CAA gene − 92541 92621 81 Locate
ndhB gene − 93173 95326 2154 Locate
rps7 gene − 95655 96122 468 Locate
rps12 gene − 96176 96969 794 Locate
trnV-GAC gene + 98590 98661 72 Locate
rrn16 gene + 98888 100378 1491 Locate
trnI-GAU gene + 100677 101696 1020 Locate
trnA-UGC gene + 101769 102646 878 Locate
rrn23 gene + 102810 105620 2811 Locate
rrn4.5 gene + 105721 105823 103 Locate
rrn5 gene + 106073 106193 121 Locate
trnR-ACG gene + 106443 106516 74 Locate
trnN-GUU gene − 107035 107106 72 Locate
ycf1 gene + 107325 108501 1177 Locate
ndhF gene − 108466 110697 2232 Locate
rpl32 gene + 111145 111342 198 Locate
trnL-UAG gene + 112068 112147 80 Locate
ccsA gene + 112197 113216 1020 Locate
ndhD gene − 113445 114986 1542 Locate
psaC gene − 115083 115328 246 Locate
ndhE gene − 115583 115885 303 Locate
ndhG gene − 116103 116633 531 Locate
ndhI gene − 117020 117526 507 Locate
ndhA gene − 117607 119705 2099 Locate
ndhH gene − 119707 120942 1236 Locate
rps15 gene − 120988 121260 273 Locate
ycf1 gene − 121654 127302 5649 Locate
trnN-GUU gene + 127521 127592 72 Locate
trnR-ACG gene − 128111 128184 74 Locate
rrn5 gene − 128434 128554 121 Locate
rrn4.5 gene − 128804 128906 103 Locate
rrn23 gene − 129007 131817 2811 Locate
trnA-UGC gene − 131981 132858 878 Locate
trnI-GAU gene − 132931 133950 1020 Locate
rrn16 gene − 134249 135739 1491 Locate
trnV-GAC gene − 135966 136037 72 Locate
rps12 gene + 137658 138451 794 Locate
rps7 gene + 138505 138972 468 Locate
ndhB gene + 139301 141454 2154 Locate
trnL-CAA gene + 142006 142086 81 Locate
ycf15 gene − 142347 142595 249 Locate
ycf2 gene − 142686 149525 6840 Locate
trnI-CAU gene + 149614 149687 74 Locate
rpl23 gene + 149853 150134 282 Locate
rpl2 gene + 150153 151640 1488 Locate
rps19 gene + 151701 151742 42 Locate
Status Available
Accession NC_084047.1
Length 151,745 bp
GC content 37.9%
Annotated genes 134
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 15 Ribosomal Protein 27 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources