Salvia glutinosa chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
LSC
IR
SSC
IR
trnH-GUG · NC_067736.1 · 12–85 bp · −
psbA · NC_067736.1 · 389–1,447 bp · −
trnK-UUU · NC_067736.1 · 1,679–4,272 bp · −
matK · NC_067736.1 · 1,978–3,540 bp · −
rps16 · NC_067736.1 · 4,845–5,954 bp · −
trnQ-UUG · NC_067736.1 · 6,926–6,997 bp · −
trnS-GCU · NC_067736.1 · 8,240–8,327 bp · −
atpA · NC_067736.1 · 10,125–11,648 bp · −
atpF · NC_067736.1 · 11,745–12,989 bp · −
atpH · NC_067736.1 · 13,255–13,500 bp · −
atpI · NC_067736.1 · 14,498–15,241 bp · −
rps2 · NC_067736.1 · 15,466–16,176 bp · −
rpoC2 · NC_067736.1 · 16,384–20,571 bp · −
rpoC1 · NC_067736.1 · 20,729–23,549 bp · −
rpoB · NC_067736.1 · 23,576–26,788 bp · −
psbM · NC_067736.1 · 29,233–29,337 bp · −
trnD-GUC · NC_067736.1 · 29,865–29,938 bp · −
trnY-GUA · NC_067736.1 · 30,049–30,132 bp · −
trnE-UUC · NC_067736.1 · 30,204–30,276 bp · −
trnS-UGA · NC_067736.1 · 34,940–35,032 bp · −
trnfM-CAU · NC_067736.1 · 36,069–36,142 bp · −
rps14 · NC_067736.1 · 36,287–36,589 bp · −
psaB · NC_067736.1 · 36,712–38,916 bp · −
psaA · NC_067736.1 · 38,942–41,194 bp · −
ycf3 · NC_067736.1 · 41,969–43,917 bp · −
rps4 · NC_067736.1 · 45,105–45,710 bp · −
trnT-UGU · NC_067736.1 · 46,079–46,151 bp · −
ndhJ · NC_067736.1 · 48,251–48,727 bp · −
ndhK · NC_067736.1 · 48,838–49,515 bp · −
ndhC · NC_067736.1 · 49,567–49,929 bp · −
trnV-UAC · NC_067736.1 · 50,879–51,527 bp · −
atpE · NC_067736.1 · 51,999–52,400 bp · −
atpB · NC_067736.1 · 52,397–53,893 bp · −
psbJ · NC_067736.1 · 63,398–63,520 bp · −
psbL · NC_067736.1 · 63,650–63,766 bp · −
psbF · NC_067736.1 · 63,790–63,909 bp · −
psbE · NC_067736.1 · 63,924–64,175 bp · −
trnW-CCA · NC_067736.1 · 65,453–65,526 bp · −
trnP-UGG · NC_067736.1 · 65,705–65,778 bp · −
rpl20 · NC_067736.1 · 67,543–67,929 bp · −
rps12 · NC_067736.1 · 68,737–68,850 bp · −
rps12 · NC_067736.1 · 96,109–96,902 bp · −
clpP · NC_067736.1 · 68,974–70,894 bp · −
psbN · NC_067736.1 · 73,216–73,347 bp · −
rpoA · NC_067736.1 · 76,724–77,731 bp · −
rps11 · NC_067736.1 · 77,803–78,219 bp · −
rpl36 · NC_067736.1 · 78,329–78,442 bp · −
infA · NC_067736.1 · 78,538–78,771 bp · −
rps8 · NC_067736.1 · 78,898–79,302 bp · −
rpl14 · NC_067736.1 · 79,485–79,853 bp · −
rpl16 · NC_067736.1 · 79,985–81,262 bp · −
rps3 · NC_067736.1 · 81,398–82,060 bp · −
rpl22 · NC_067736.1 · 82,122–82,502 bp · −
rps19 · NC_067736.1 · 82,572–82,850 bp · −
rpl2 · NC_067736.1 · 82,909–84,391 bp · −
rpl23 · NC_067736.1 · 84,410–84,691 bp · −
trnI-CAU · NC_067736.1 · 84,857–84,930 bp · −
trnL-CAA · NC_067736.1 · 92,461–92,541 bp · −
ndhB · NC_067736.1 · 93,101–95,254 bp · −
rps7 · NC_067736.1 · 95,588–96,055 bp · −
trnN-GUU · NC_067736.1 · 106,957–107,028 bp · −
ndhF · NC_067736.1 · 108,382–110,616 bp · −
ndhD · NC_067736.1 · 113,332–114,873 bp · −
psaC · NC_067736.1 · 114,973–115,218 bp · −
ndhE · NC_067736.1 · 115,469–115,771 bp · −
ndhG · NC_067736.1 · 115,996–116,526 bp · −
ndhI · NC_067736.1 · 116,911–117,417 bp · −
ndhA · NC_067736.1 · 117,498–119,598 bp · −
ndhH · NC_067736.1 · 119,600–120,835 bp · −
rps15 · NC_067736.1 · 120,881–121,153 bp · −
ycf1 · NC_067736.1 · 121,570–127,224 bp · −
trnR-ACG · NC_067736.1 · 128,034–128,107 bp · −
rrn5 · NC_067736.1 · 128,351–128,471 bp · −
rrn4.5 · NC_067736.1 · 128,727–128,829 bp · −
rrn23 · NC_067736.1 · 128,930–131,738 bp · −
trnA-UGC · NC_067736.1 · 131,904–132,780 bp · −
trnI-GAU · NC_067736.1 · 132,845–133,857 bp · −
rrn16 · NC_067736.1 · 134,156–135,646 bp · −
trnV-GAC · NC_067736.1 · 135,873–135,944 bp · −
ycf15 · NC_067736.1 · 142,271–142,519 bp · −
ycf2 · NC_067736.1 · 142,610–149,452 bp · −
psbK · NC_067736.1 · 7,384–7,563 bp · +
psbI · NC_067736.1 · 7,964–8,074 bp · +
trnG-UCC · NC_067736.1 · 9,013–9,765 bp · +
trnR-UCU · NC_067736.1 · 9,947–10,018 bp · +
trnC-GCA · NC_067736.1 · 27,942–28,012 bp · +
petN · NC_067736.1 · 28,176–28,265 bp · +
trnT-GGU · NC_067736.1 · 30,819–30,890 bp · +
psbD · NC_067736.1 · 32,264–33,325 bp · +
psbC · NC_067736.1 · 33,273–34,694 bp · +
psbZ · NC_067736.1 · 35,367–35,555 bp · +
trnG-GCC · NC_067736.1 · 35,827–35,897 bp · +
trnS-GGA · NC_067736.1 · 44,742–44,828 bp · +
trnL-UAA · NC_067736.1 · 46,807–47,346 bp · +
trnF-GAA · NC_067736.1 · 47,645–47,717 bp · +
trnM-CAU · NC_067736.1 · 51,716–51,788 bp · +
rbcL · NC_067736.1 · 54,657–56,117 bp · +
accD · NC_067736.1 · 56,830–58,287 bp · +
psaI · NC_067736.1 · 58,762–58,872 bp · +
ycf4 · NC_067736.1 · 59,318–59,872 bp · +
cemA · NC_067736.1 · 60,484–61,173 bp · +
petA · NC_067736.1 · 61,394–62,356 bp · +
petL · NC_067736.1 · 64,982–65,077 bp · +
petG · NC_067736.1 · 65,225–65,338 bp · +
psaJ · NC_067736.1 · 66,069–66,203 bp · +
rpl33 · NC_067736.1 · 66,640–66,840 bp · +
rps18 · NC_067736.1 · 67,006–67,311 bp · +
rps12 · NC_067736.1 · 137,569–138,362 bp · +
psbB · NC_067736.1 · 71,338–72,864 bp · +
psbT · NC_067736.1 · 73,048–73,155 bp · +
psbH · NC_067736.1 · 73,453–73,674 bp · +
petB · NC_067736.1 · 73,800–75,157 bp · +
petD · NC_067736.1 · 75,351–76,547 bp · +
ycf2 · NC_067736.1 · 85,019–91,861 bp · +
ycf15 · NC_067736.1 · 91,952–92,200 bp · +
trnV-GAC · NC_067736.1 · 98,527–98,598 bp · +
rrn16 · NC_067736.1 · 98,825–100,315 bp · +
trnI-GAU · NC_067736.1 · 100,614–101,626 bp · +
trnA-UGC · NC_067736.1 · 101,691–102,567 bp · +
rrn23 · NC_067736.1 · 102,733–105,541 bp · +
rrn4.5 · NC_067736.1 · 105,642–105,744 bp · +
rrn5 · NC_067736.1 · 106,000–106,120 bp · +
trnR-ACG · NC_067736.1 · 106,364–106,437 bp · +
ycf1 · NC_067736.1 · 107,247–108,413 bp · +
rpl32 · NC_067736.1 · 111,049–111,219 bp · +
trnL-UAG · NC_067736.1 · 111,947–112,026 bp · +
ccsA · NC_067736.1 · 112,071–113,096 bp · +
trnN-GUU · NC_067736.1 · 127,443–127,514 bp · +
rps7 · NC_067736.1 · 138,416–138,883 bp · +
ndhB · NC_067736.1 · 139,217–141,370 bp · +
trnL-CAA · NC_067736.1 · 141,930–142,010 bp · +
trnI-CAU · NC_067736.1 · 149,541–149,614 bp · +
rpl23 · NC_067736.1 · 149,780–150,061 bp · +
rpl2 · NC_067736.1 · 150,080–151,562 bp · +
rps19 · NC_067736.1 · 151,621–151,662 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Salvia glutinosa
ANNOTATED PLASTOME
NC_067736.1
151,662 bp · 134 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37916 75831 113746 151662 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG ycf1 rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2 rps19
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
135 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 12 85 74 Locate
psbA gene − 389 1447 1059 Locate
trnK-UUU gene − 1679 4272 2594 Locate
matK gene − 1978 3540 1563 Locate
rps16 gene − 4845 5954 1110 Locate
trnQ-UUG gene − 6926 6997 72 Locate
psbK gene + 7384 7563 180 Locate
psbI gene + 7964 8074 111 Locate
trnS-GCU gene − 8240 8327 88 Locate
trnG-UCC gene + 9013 9765 753 Locate
trnR-UCU gene + 9947 10018 72 Locate
atpA gene − 10125 11648 1524 Locate
atpF gene − 11745 12989 1245 Locate
atpH gene − 13255 13500 246 Locate
atpI gene − 14498 15241 744 Locate
rps2 gene − 15466 16176 711 Locate
rpoC2 gene − 16384 20571 4188 Locate
rpoC1 gene − 20729 23549 2821 Locate
rpoB gene − 23576 26788 3213 Locate
trnC-GCA gene + 27942 28012 71 Locate
petN gene + 28176 28265 90 Locate
psbM gene − 29233 29337 105 Locate
trnD-GUC gene − 29865 29938 74 Locate
trnY-GUA gene − 30049 30132 84 Locate
trnE-UUC gene − 30204 30276 73 Locate
trnT-GGU gene + 30819 30890 72 Locate
psbD gene + 32264 33325 1062 Locate
psbC gene + 33273 34694 1422 Locate
trnS-UGA gene − 34940 35032 93 Locate
psbZ gene + 35367 35555 189 Locate
trnG-GCC gene + 35827 35897 71 Locate
trnfM-CAU gene − 36069 36142 74 Locate
rps14 gene − 36287 36589 303 Locate
psaB gene − 36712 38916 2205 Locate
psaA gene − 38942 41194 2253 Locate
ycf3 gene − 41969 43917 1949 Locate
trnS-GGA gene + 44742 44828 87 Locate
rps4 gene − 45105 45710 606 Locate
trnT-UGU gene − 46079 46151 73 Locate
trnL-UAA gene + 46807 47346 540 Locate
trnF-GAA gene + 47645 47717 73 Locate
ndhJ gene − 48251 48727 477 Locate
ndhK gene − 48838 49515 678 Locate
ndhC gene − 49567 49929 363 Locate
trnV-UAC gene − 50879 51527 649 Locate
trnM-CAU gene + 51716 51788 73 Locate
atpE gene − 51999 52400 402 Locate
atpB gene − 52397 53893 1497 Locate
rbcL gene + 54657 56117 1461 Locate
accD gene + 56830 58287 1458 Locate
psaI gene + 58762 58872 111 Locate
ycf4 gene + 59318 59872 555 Locate
cemA gene + 60484 61173 690 Locate
petA gene + 61394 62356 963 Locate
psbJ gene − 63398 63520 123 Locate
psbL gene − 63650 63766 117 Locate
psbF gene − 63790 63909 120 Locate
psbE gene − 63924 64175 252 Locate
petL gene + 64982 65077 96 Locate
petG gene + 65225 65338 114 Locate
trnW-CCA gene − 65453 65526 74 Locate
trnP-UGG gene − 65705 65778 74 Locate
psaJ gene + 66069 66203 135 Locate
rpl33 gene + 66640 66840 201 Locate
rps18 gene + 67006 67311 306 Locate
rpl20 gene − 67543 67929 387 Locate
rps12 gene − 68737 68850 114 Locate
clpP gene − 68974 70894 1921 Locate
psbB gene + 71338 72864 1527 Locate
psbT gene + 73048 73155 108 Locate
psbN gene − 73216 73347 132 Locate
psbH gene + 73453 73674 222 Locate
petB gene + 73800 75157 1358 Locate
petD gene + 75351 76547 1197 Locate
rpoA gene − 76724 77731 1008 Locate
rps11 gene − 77803 78219 417 Locate
rpl36 gene − 78329 78442 114 Locate
infA gene − 78538 78771 234 Locate
rps8 gene − 78898 79302 405 Locate
rpl14 gene − 79485 79853 369 Locate
rpl16 gene − 79985 81262 1278 Locate
rps3 gene − 81398 82060 663 Locate
rpl22 gene − 82122 82502 381 Locate
rps19 gene − 82572 82850 279 Locate
rpl2 gene − 82909 84391 1483 Locate
rpl23 gene − 84410 84691 282 Locate
trnI-CAU gene − 84857 84930 74 Locate
ycf2 gene + 85019 91861 6843 Locate
ycf15 gene + 91952 92200 249 Locate
trnL-CAA gene − 92461 92541 81 Locate
ndhB gene − 93101 95254 2154 Locate
rps7 gene − 95588 96055 468 Locate
rps12 gene − 96109 96902 794 Locate
trnV-GAC gene + 98527 98598 72 Locate
rrn16 gene + 98825 100315 1491 Locate
trnI-GAU gene + 100614 101626 1013 Locate
trnA-UGC gene + 101691 102567 877 Locate
rrn23 gene + 102733 105541 2809 Locate
rrn4.5 gene + 105642 105744 103 Locate
rrn5 gene + 106000 106120 121 Locate
trnR-ACG gene + 106364 106437 74 Locate
trnN-GUU gene − 106957 107028 72 Locate
ycf1 gene + 107247 108413 1167 Locate
ndhF gene − 108382 110616 2235 Locate
rpl32 gene + 111049 111219 171 Locate
trnL-UAG gene + 111947 112026 80 Locate
ccsA gene + 112071 113096 1026 Locate
ndhD gene − 113332 114873 1542 Locate
psaC gene − 114973 115218 246 Locate
ndhE gene − 115469 115771 303 Locate
ndhG gene − 115996 116526 531 Locate
ndhI gene − 116911 117417 507 Locate
ndhA gene − 117498 119598 2101 Locate
ndhH gene − 119600 120835 1236 Locate
rps15 gene − 120881 121153 273 Locate
ycf1 gene − 121570 127224 5655 Locate
trnN-GUU gene + 127443 127514 72 Locate
trnR-ACG gene − 128034 128107 74 Locate
rrn5 gene − 128351 128471 121 Locate
rrn4.5 gene − 128727 128829 103 Locate
rrn23 gene − 128930 131738 2809 Locate
trnA-UGC gene − 131904 132780 877 Locate
trnI-GAU gene − 132845 133857 1013 Locate
rrn16 gene − 134156 135646 1491 Locate
trnV-GAC gene − 135873 135944 72 Locate
rps12 gene + 137569 138362 794 Locate
rps7 gene + 138416 138883 468 Locate
ndhB gene + 139217 141370 2154 Locate
trnL-CAA gene + 141930 142010 81 Locate
ycf15 gene − 142271 142519 249 Locate
ycf2 gene − 142610 149452 6843 Locate
trnI-CAU gene + 149541 149614 74 Locate
rpl23 gene + 149780 150061 282 Locate
rpl2 gene + 150080 151562 1483 Locate
rps19 gene + 151621 151662 42 Locate
Status Available
Accession NC_067736.1
Length 151,662 bp
GC content 38.0%
Annotated genes 134
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 15 Ribosomal Protein 27 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources