Coordinate-aware organelle record

Salvia glutinosa chloroplast genome

Available NC_067736.1 151,662 bp 134 coordinate-linked features
LSCIRSSCIR0 kb13 kb26 kb39 kb52 kb65 kb78 kb91 kb104 kb117 kb130 kb143 kbtrnH-GUG · gene · 12-85 bp · − strandpsbA · gene · 389-1,447 bp · − strandtrnK-UUU · gene · 1,679-4,272 bp · − strandmatK · gene · 1,978-3,540 bp · − strandrps16 · gene · 4,845-5,954 bp · − strandtrnQ-UUG · gene · 6,926-6,997 bp · − strandpsbK · gene · 7,384-7,563 bp · + strandpsbI · gene · 7,964-8,074 bp · + strandtrnS-GCU · gene · 8,240-8,327 bp · − strandtrnG-UCC · gene · 9,013-9,765 bp · + strandtrnR-UCU · gene · 9,947-10,018 bp · + strandatpA · gene · 10,125-11,648 bp · − strandatpF · gene · 11,745-12,989 bp · − strandatpH · gene · 13,255-13,500 bp · − strandatpI · gene · 14,498-15,241 bp · − strandrps2 · gene · 15,466-16,176 bp · − strandrpoC2 · gene · 16,384-20,571 bp · − strandrpoC1 · gene · 20,729-23,549 bp · − strandrpoB · gene · 23,576-26,788 bp · − strandtrnC-GCA · gene · 27,942-28,012 bp · + strandpetN · gene · 28,176-28,265 bp · + strandpsbM · gene · 29,233-29,337 bp · − strandtrnD-GUC · gene · 29,865-29,938 bp · − strandtrnY-GUA · gene · 30,049-30,132 bp · − strandtrnE-UUC · gene · 30,204-30,276 bp · − strandtrnT-GGU · gene · 30,819-30,890 bp · + strandpsbD · gene · 32,264-33,325 bp · + strandpsbC · gene · 33,273-34,694 bp · + strandtrnS-UGA · gene · 34,940-35,032 bp · − strandpsbZ · gene · 35,367-35,555 bp · + strandtrnG-GCC · gene · 35,827-35,897 bp · + strandtrnfM-CAU · gene · 36,069-36,142 bp · − strandrps14 · gene · 36,287-36,589 bp · − strandpsaB · gene · 36,712-38,916 bp · − strandpsaA · gene · 38,942-41,194 bp · − strandycf3 · gene · 41,969-43,917 bp · − strandtrnS-GGA · gene · 44,742-44,828 bp · + strandrps4 · gene · 45,105-45,710 bp · − strandtrnT-UGU · gene · 46,079-46,151 bp · − strandtrnL-UAA · gene · 46,807-47,346 bp · + strandtrnF-GAA · gene · 47,645-47,717 bp · + strandndhJ · gene · 48,251-48,727 bp · − strandndhK · gene · 48,838-49,515 bp · − strandndhC · gene · 49,567-49,929 bp · − strandtrnV-UAC · gene · 50,879-51,527 bp · − strandtrnM-CAU · gene · 51,716-51,788 bp · + strandatpE · gene · 51,999-52,400 bp · − strandatpB · gene · 52,397-53,893 bp · − strandrbcL · gene · 54,657-56,117 bp · + strandaccD · gene · 56,830-58,287 bp · + strandpsaI · gene · 58,762-58,872 bp · + strandycf4 · gene · 59,318-59,872 bp · + strandcemA · gene · 60,484-61,173 bp · + strandpetA · gene · 61,394-62,356 bp · + strandpsbJ · gene · 63,398-63,520 bp · − strandpsbL · gene · 63,650-63,766 bp · − strandpsbF · gene · 63,790-63,909 bp · − strandpsbE · gene · 63,924-64,175 bp · − strandpetL · gene · 64,982-65,077 bp · + strandpetG · gene · 65,225-65,338 bp · + strandtrnW-CCA · gene · 65,453-65,526 bp · − strandtrnP-UGG · gene · 65,705-65,778 bp · − strandpsaJ · gene · 66,069-66,203 bp · + strandrpl33 · gene · 66,640-66,840 bp · + strandrps18 · gene · 67,006-67,311 bp · + strandrpl20 · gene · 67,543-67,929 bp · − strandrps12 · gene · 68,737-96,902 bp · − strandrps12 · gene · 68,737-138,362 bp · + strandclpP · gene · 68,974-70,894 bp · − strandpsbB · gene · 71,338-72,864 bp · + strandpsbT · gene · 73,048-73,155 bp · + strandpsbN · gene · 73,216-73,347 bp · − strandpsbH · gene · 73,453-73,674 bp · + strandpetB · gene · 73,800-75,157 bp · + strandpetD · gene · 75,351-76,547 bp · + strandrpoA · gene · 76,724-77,731 bp · − strandrps11 · gene · 77,803-78,219 bp · − strandrpl36 · gene · 78,329-78,442 bp · − strandinfA · gene · 78,538-78,771 bp · − strandrps8 · gene · 78,898-79,302 bp · − strandrpl14 · gene · 79,485-79,853 bp · − strandrpl16 · gene · 79,985-81,262 bp · − strandrps3 · gene · 81,398-82,060 bp · − strandrpl22 · gene · 82,122-82,502 bp · − strandrps19 · gene · 82,572-82,850 bp · − strandrpl2 · gene · 82,909-84,391 bp · − strandrpl23 · gene · 84,410-84,691 bp · − strandtrnI-CAU · gene · 84,857-84,930 bp · − strandycf2 · gene · 85,019-91,861 bp · + strandycf15 · gene · 91,952-92,200 bp · + strandtrnL-CAA · gene · 92,461-92,541 bp · − strandndhB · gene · 93,101-95,254 bp · − strandrps7 · gene · 95,588-96,055 bp · − strandtrnV-GAC · gene · 98,527-98,598 bp · + strandrrn16 · gene · 98,825-100,315 bp · + strandtrnI-GAU · gene · 100,614-101,626 bp · + strandtrnA-UGC · gene · 101,691-102,567 bp · + strandrrn23 · gene · 102,733-105,541 bp · + strandrrn4.5 · gene · 105,642-105,744 bp · + strandrrn5 · gene · 106,000-106,120 bp · + strandtrnR-ACG · gene · 106,364-106,437 bp · + strandtrnN-GUU · gene · 106,957-107,028 bp · − strandycf1 · gene · 107,247-108,413 bp · + strandndhF · gene · 108,382-110,616 bp · − strandrpl32 · gene · 111,049-111,219 bp · + strandtrnL-UAG · gene · 111,947-112,026 bp · + strandccsA · gene · 112,071-113,096 bp · + strandndhD · gene · 113,332-114,873 bp · − strandpsaC · gene · 114,973-115,218 bp · − strandndhE · gene · 115,469-115,771 bp · − strandndhG · gene · 115,996-116,526 bp · − strandndhI · gene · 116,911-117,417 bp · − strandndhA · gene · 117,498-119,598 bp · − strandndhH · gene · 119,600-120,835 bp · − strandrps15 · gene · 120,881-121,153 bp · − strandycf1 · gene · 121,570-127,224 bp · − strandtrnN-GUU · gene · 127,443-127,514 bp · + strandtrnR-ACG · gene · 128,034-128,107 bp · − strandrrn5 · gene · 128,351-128,471 bp · − strandrrn4.5 · gene · 128,727-128,829 bp · − strandrrn23 · gene · 128,930-131,738 bp · − strandtrnA-UGC · gene · 131,904-132,780 bp · − strandtrnI-GAU · gene · 132,845-133,857 bp · − strandrrn16 · gene · 134,156-135,646 bp · − strandtrnV-GAC · gene · 135,873-135,944 bp · − strandrps7 · gene · 138,416-138,883 bp · + strandndhB · gene · 139,217-141,370 bp · + strandtrnL-CAA · gene · 141,930-142,010 bp · + strandycf15 · gene · 142,271-142,519 bp · − strandycf2 · gene · 142,610-149,452 bp · − strandtrnI-CAU · gene · 149,541-149,614 bp · + strandrpl23 · gene · 149,780-150,061 bp · + strandrpl2 · gene · 150,080-151,562 bp · + strandrps19 · gene · 151,621-151,662 bp · + strandSalvia glutinosaANNOTATED PLASTOMENC_067736.1151,662 bp · 134 genesOuter ring: forward strand · inner ring: reverse strand · click a gene to open its pageGene functionTranslation RnaPhotosystem IiOtherRibosomal ProteinAtp SynthaseRna PolymeraseCytochromePhotosystem INad DehydrogenaseRibosomal RnaVerified annotationSource: NCBI GenBankAccession: NC_067736.1Features: 134 coordinate-linked genesHover for coordinates · click for gene page

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

134 features
GeneTypeGroupStrandStartEndLength
trnH-GUGgenetranslation-rna−118574
psbAgenephotosystem-ii−38814471059
trnK-UUUgenetranslation-rna−167842722594
matKgeneother−197735401563
rps16generibosomal-protein−484459541110
trnQ-UUGgenetranslation-rna−6925699772
psbKgenephotosystem-ii+73837563180
psbIgenephotosystem-ii+79638074111
trnS-GCUgenetranslation-rna−8239832788
trnG-UCCgenetranslation-rna+90129765753
trnR-UCUgenetranslation-rna+99461001872
atpAgeneatp-synthase−10124116481524
atpFgeneatp-synthase−11744129891245
atpHgeneatp-synthase−1325413500246
atpIgeneatp-synthase−1449715241744
rps2generibosomal-protein−1546516176711
rpoC2generna-polymerase−16383205714188
rpoC1generna-polymerase−20728235492821
rpoBgenerna-polymerase−23575267883213
trnC-GCAgenetranslation-rna+279412801271
petNgenecytochrome+281752826590
psbMgenephotosystem-ii−2923229337105
trnD-GUCgenetranslation-rna−298642993874
trnY-GUAgenetranslation-rna−300483013284
trnE-UUCgenetranslation-rna−302033027673
trnT-GGUgenetranslation-rna+308183089072
psbDgenephotosystem-ii+32263333251062
psbCgenephotosystem-ii+33272346941422
trnS-UGAgenetranslation-rna−349393503293
psbZgenephotosystem-ii+3536635555189
trnG-GCCgenetranslation-rna+358263589771
trnfM-CAUgenetranslation-rna−360683614274
rps14generibosomal-protein−3628636589303
psaBgenephotosystem-i−36711389162205
psaAgenephotosystem-i−38941411942253
ycf3geneother−41968439171949
trnS-GGAgenetranslation-rna+447414482887
rps4generibosomal-protein−4510445710606
trnT-UGUgenetranslation-rna−460784615173
trnL-UAAgenetranslation-rna+4680647346540
trnF-GAAgenetranslation-rna+476444771773
ndhJgenenad-dehydrogenase−4825048727477
ndhKgenenad-dehydrogenase−4883749515678
ndhCgenenad-dehydrogenase−4956649929363
trnV-UACgenetranslation-rna−5087851527649
trnM-CAUgenetranslation-rna+517155178873
atpEgeneatp-synthase−5199852400402
atpBgeneatp-synthase−52396538931497
rbcLgeneother+54656561171461
accDgeneother+56829582871458
psaIgenephotosystem-i+5876158872111
ycf4geneother+5931759872555
cemAgeneother+6048361173690
petAgenecytochrome+6139362356963
psbJgenephotosystem-ii−6339763520123
psbLgenephotosystem-ii−6364963766117
psbFgenephotosystem-ii−6378963909120
psbEgenephotosystem-ii−6392364175252
petLgenecytochrome+649816507796
petGgenecytochrome+6522465338114
trnW-CCAgenetranslation-rna−654526552674
trnP-UGGgenetranslation-rna−657046577874
psaJgenephotosystem-i+6606866203135
rpl33generibosomal-protein+6663966840201
rps18generibosomal-protein+6700567311306
rpl20generibosomal-protein−6754267929387
rps12generibosomal-protein−687369690228166
rps12generibosomal-protein+6873613836269626
clpPgeneother−68973708941921
psbBgenephotosystem-ii+71337728641527
psbTgenephotosystem-ii+7304773155108
psbNgenephotosystem-ii−7321573347132
psbHgenephotosystem-ii+7345273674222
petBgenecytochrome+73799751571358
petDgenecytochrome+75350765471197
rpoAgenerna-polymerase−76723777311008
rps11generibosomal-protein−7780278219417
rpl36generibosomal-protein−7832878442114
infAgeneother−7853778771234
rps8generibosomal-protein−7889779302405
rpl14generibosomal-protein−7948479853369
rpl16generibosomal-protein−79984812621278
rps3generibosomal-protein−8139782060663
rpl22generibosomal-protein−8212182502381
rps19generibosomal-protein−8257182850279
rpl2generibosomal-protein−82908843911483
rpl23generibosomal-protein−8440984691282
trnI-CAUgenetranslation-rna−848568493074
ycf2geneother+85018918616843
ycf15geneother+9195192200249
trnL-CAAgenetranslation-rna−924609254181
ndhBgenenad-dehydrogenase−93100952542154
rps7generibosomal-protein−9558796055468
trnV-GACgenetranslation-rna+985269859872
rrn16generibosomal-rna+988241003151491
trnI-GAUgenetranslation-rna+1006131016261013
trnA-UGCgenetranslation-rna+101690102567877
rrn23generibosomal-rna+1027321055412809
rrn4.5generibosomal-rna+105641105744103
rrn5generibosomal-rna+105999106120121
trnR-ACGgenetranslation-rna+10636310643774
trnN-GUUgenetranslation-rna−10695610702872
ycf1geneother+1072461084131167
ndhFgenenad-dehydrogenase−1083811106162235
rpl32generibosomal-protein+111048111219171
trnL-UAGgenetranslation-rna+11194611202680
ccsAgeneother+1120701130961026
ndhDgenenad-dehydrogenase−1133311148731542
psaCgenephotosystem-i−114972115218246
ndhEgenenad-dehydrogenase−115468115771303
ndhGgenenad-dehydrogenase−115995116526531
ndhIgenenad-dehydrogenase−116910117417507
ndhAgenenad-dehydrogenase−1174971195982101
ndhHgenenad-dehydrogenase−1195991208351236
rps15generibosomal-protein−120880121153273
ycf1geneother−1215691272245655
trnN-GUUgenetranslation-rna+12744212751472
trnR-ACGgenetranslation-rna−12803312810774
rrn5generibosomal-rna−128350128471121
rrn4.5generibosomal-rna−128726128829103
rrn23generibosomal-rna−1289291317382809
trnA-UGCgenetranslation-rna−131903132780877
trnI-GAUgenetranslation-rna−1328441338571013
rrn16generibosomal-rna−1341551356461491
trnV-GACgenetranslation-rna−13587213594472
rps7generibosomal-protein+138415138883468
ndhBgenenad-dehydrogenase+1392161413702154
trnL-CAAgenetranslation-rna+14192914201081
ycf15geneother−142270142519249
ycf2geneother−1426091494526843
trnI-CAUgenetranslation-rna+14954014961474
rpl23generibosomal-protein+149779150061282
rpl2generibosomal-protein+1500791515621483
rps19generibosomal-protein+15162015166242

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources