Coordinate-aware organelle record

Salvia japonica chloroplast genome

Available NC_035233.1 153,995 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	1657	1731	74
psbA	gene	photosystem-ii	−	2040	3099	1059
trnK-UUU	gene	translation-rna	−	3330	5911	2581
matK	gene	other	−	3642	5172	1530
rps16	gene	ribosomal-protein	−	6485	7585	1100
trnQ-UUG	gene	translation-rna	−	8545	8617	72
psbK	gene	photosystem-ii	+	9002	9182	180
psbI	gene	photosystem-ii	+	9589	9700	111
trnS-GCU	gene	translation-rna	−	9868	9956	88
trnG-UCC	gene	translation-rna	+	10658	11413	755
trnR-UCU	gene	translation-rna	+	11600	11672	72
atpA	gene	atp-synthase	−	11777	13301	1524
atpF	gene	atp-synthase	−	13400	14659	1259
atpH	gene	atp-synthase	−	14929	15175	246
atpI	gene	atp-synthase	−	16159	16903	744
rps2	gene	ribosomal-protein	−	17127	17838	711
rpoC2	gene	rna-polymerase	−	18053	22241	4188
rpoC1	gene	rna-polymerase	−	22405	25236	2831
rpoB	gene	rna-polymerase	−	25241	28442	3201
trnC-GCA	gene	translation-rna	+	29603	29672	69
petN	gene	cytochrome	+	29837	29927	90
psbM	gene	photosystem-ii	−	30931	31036	105
trnD-GUC	gene	translation-rna	−	31539	31613	74
trnY-GUA	gene	translation-rna	−	31723	31807	84
trnE-UUC	gene	translation-rna	−	31878	31951	73
trnT-GGU	gene	translation-rna	+	32514	32586	72
psbD	gene	photosystem-ii	+	33959	35021	1062
psbC	gene	photosystem-ii	+	34968	36390	1422
trnS-UGA	gene	translation-rna	−	36635	36720	85
psbZ	gene	photosystem-ii	+	37049	37238	189
trnG-GCC	gene	translation-rna	+	37514	37584	70
trnfM-CAU	gene	translation-rna	−	37753	37827	74
rps14	gene	ribosomal-protein	−	37977	38280	303
psaB	gene	photosystem-i	−	38402	40607	2205
psaA	gene	photosystem-i	−	40632	42882	2250
ycf3	gene	other	−	43668	45626	1958
trnS-GGA	gene	translation-rna	+	46459	46546	87
rps4	gene	ribosomal-protein	−	46803	47400	597
trnT-UGU	gene	translation-rna	−	47740	47813	73
trnL-UAA	gene	translation-rna	+	48507	49077	570
trnF-GAA	gene	translation-rna	+	49364	49437	73
ndhJ	gene	nad-dehydrogenase	−	50020	50497	477
ndhK	gene	nad-dehydrogenase	−	50607	51285	678
ndhC	gene	nad-dehydrogenase	−	51336	51699	363
trnV-UAC	gene	translation-rna	−	52738	53404	666
trnM-CAU	gene	translation-rna	+	53603	53676	73
atpE	gene	atp-synthase	−	53886	54288	402
atpB	gene	atp-synthase	−	54284	55781	1497
rbcL	gene	other	+	56580	58026	1446
accD	gene	other	+	58697	60170	1473
psaI	gene	photosystem-i	+	60637	60748	111
ycf4	gene	other	+	61194	61749	555
cemA	gene	other	+	62314	63004	690
petA	gene	cytochrome	+	63212	64175	963
psbJ	gene	photosystem-ii	−	65182	65305	123
psbL	gene	photosystem-ii	−	65434	65551	117
psbF	gene	photosystem-ii	−	65574	65694	120
psbE	gene	photosystem-ii	−	65708	65960	252
petL	gene	cytochrome	+	66817	66913	96
petG	gene	cytochrome	+	67091	67205	114
trnW-CCA	gene	translation-rna	−	67315	67389	74
trnP-UGG	gene	translation-rna	−	67559	67633	74
psaJ	gene	photosystem-i	+	67907	68042	135
rpl33	gene	ribosomal-protein	+	68483	68684	201
rps18	gene	ribosomal-protein	+	68854	69181	327
rpl20	gene	ribosomal-protein	−	69413	69800	387
rps12	gene	ribosomal-protein	−	70598	98769	28171
rps12	gene	ribosomal-protein	+	70598	140593	69995
clpP	gene	other	−	70833	72725	1892
psbB	gene	photosystem-ii	+	73181	74708	1527
psbT	gene	photosystem-ii	+	74891	74999	108
psbN	gene	photosystem-ii	−	75059	75191	132
psbH	gene	photosystem-ii	+	75296	75518	222
petB	gene	cytochrome	+	75643	77021	1378
petD	gene	cytochrome	+	77209	78400	1191
rpoA	gene	rna-polymerase	−	78587	79595	1008
rps11	gene	ribosomal-protein	−	79665	80082	417
rpl36	gene	ribosomal-protein	−	80191	80305	114
infA	gene	other	−	80400	80634	234
rps8	gene	ribosomal-protein	−	80754	81159	405
rpl14	gene	ribosomal-protein	−	81329	81698	369
rpl16	gene	ribosomal-protein	−	81827	83097	1270
rps3	gene	ribosomal-protein	−	83247	83910	663
rpl22	gene	ribosomal-protein	−	83894	84362	468
rps19	gene	ribosomal-protein	−	84431	84707	276
rpl2	gene	ribosomal-protein	−	84770	86258	1488
rpl23	gene	ribosomal-protein	−	86276	86558	282
trnI-CAU	gene	translation-rna	−	86723	86797	74
ycf2	gene	other	+	86885	93746	6861
ycf15	gene	other	+	93836	94085	249
trnL-CAA	gene	translation-rna	−	94340	94421	81
ndhB	gene	nad-dehydrogenase	−	94972	97180	2208
rps7	gene	ribosomal-protein	−	97454	97922	468
trnV-GAC	gene	translation-rna	+	100599	100671	72
rrn16	gene	ribosomal-rna	+	100897	102388	1491
trnI-GAU	gene	translation-rna	+	102686	103706	1020
trnA-UGC	gene	translation-rna	+	103770	104648	878
rrn23	gene	ribosomal-rna	+	104808	107621	2813
rrn4.5	gene	ribosomal-rna	+	107719	107822	103
rrn5	gene	ribosomal-rna	+	108071	108192	121
trnR-ACG	gene	translation-rna	+	108435	108509	74
trnN-GUU	gene	translation-rna	−	109034	109106	72
ndhF	gene	nad-dehydrogenase	−	110453	112685	2232
rpl32	gene	ribosomal-protein	+	113141	113312	171
trnL-UAG	gene	translation-rna	+	114009	114094	85
ccsA	gene	other	+	114186	115158	972
ndhD	gene	nad-dehydrogenase	−	115390	116932	1542
psaC	gene	photosystem-i	−	117026	117272	246
ndhE	gene	nad-dehydrogenase	−	117522	117828	306
ndhG	gene	nad-dehydrogenase	−	118047	118578	531
ndhI	gene	nad-dehydrogenase	−	118951	119458	507
ndhA	gene	nad-dehydrogenase	−	119538	121635	2097
ndhH	gene	nad-dehydrogenase	−	121636	122818	1182
rps15	gene	ribosomal-protein	−	122917	123190	273
ycf1	gene	other	−	123607	129133	5526
trnN-GUU	gene	translation-rna	+	129462	129534	72
trnR-ACG	gene	translation-rna	−	130059	130133	74
rrn5	gene	ribosomal-rna	−	130376	130497	121
rrn4.5	gene	ribosomal-rna	−	130746	130849	103
rrn23	gene	ribosomal-rna	−	130947	133760	2813
trnA-UGC	gene	translation-rna	−	133920	134798	878
trnI-GAU	gene	translation-rna	−	134862	135882	1020
rrn16	gene	ribosomal-rna	−	136180	137671	1491
trnV-GAC	gene	translation-rna	−	137897	137969	72
rps7	gene	ribosomal-protein	+	140646	141114	468
ndhB	gene	nad-dehydrogenase	+	141388	143596	2208
trnL-CAA	gene	translation-rna	+	144147	144228	81
ycf15	gene	other	−	144483	144732	249
ycf2	gene	other	−	144822	151683	6861
trnI-CAU	gene	translation-rna	+	151771	151845	74
rpl23	gene	ribosomal-protein	+	152010	152292	282
rpl2	gene	ribosomal-protein	+	152310	153798	1488
rps19	gene	ribosomal-protein	+	153858	153897	39

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_035233.1DNA · accDNC_035233DNA · atpBNC_035233DNA · matKNC_035233DNA · ndhFNC_035233DNA · psbANC_035233DNA · rbcLNC_035233DNA · rps12NC_035233DNA · ycf1NC_035233