Salvia leucantha chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
LSC
IR
SSC
IR
trnH-GUG · NC_084044.1 · 3–76 bp · −
psbA · NC_084044.1 · 393–1,451 bp · −
trnK-UUU · NC_084044.1 · 1,683–4,248 bp · −
matK · NC_084044.1 · 1,987–3,522 bp · −
rps16 · NC_084044.1 · 4,818–5,916 bp · −
trnQ-UUG · NC_084044.1 · 6,674–6,745 bp · −
trnS-GCU · NC_084044.1 · 7,969–8,056 bp · −
atpA · NC_084044.1 · 9,874–11,397 bp · −
atpF · NC_084044.1 · 11,496–12,754 bp · −
atpH · NC_084044.1 · 13,028–13,273 bp · −
atpI · NC_084044.1 · 14,287–15,030 bp · −
rps2 · NC_084044.1 · 15,254–15,964 bp · −
rpoC2 · NC_084044.1 · 16,169–20,356 bp · −
rpoC1 · NC_084044.1 · 20,523–23,334 bp · −
rpoB · NC_084044.1 · 23,361–26,573 bp · −
psbM · NC_084044.1 · 29,035–29,139 bp · −
trnD-GUC · NC_084044.1 · 29,510–29,583 bp · −
trnY-GUA · NC_084044.1 · 29,696–29,779 bp · −
trnE-UUC · NC_084044.1 · 29,850–29,922 bp · −
trnS-UGA · NC_084044.1 · 34,577–34,669 bp · −
trnfM-CAU · NC_084044.1 · 35,690–35,763 bp · −
rps14 · NC_084044.1 · 35,908–36,210 bp · −
psaB · NC_084044.1 · 36,334–38,538 bp · −
psaA · NC_084044.1 · 38,564–40,816 bp · −
ycf3 · NC_084044.1 · 41,546–43,479 bp · −
rps4 · NC_084044.1 · 44,676–45,281 bp · −
trnT-UGU · NC_084044.1 · 45,642–45,714 bp · −
ndhJ · NC_084044.1 · 47,783–48,259 bp · −
ndhK · NC_084044.1 · 48,370–49,047 bp · −
ndhC · NC_084044.1 · 49,099–49,461 bp · −
trnV-UAC · NC_084044.1 · 50,266–50,918 bp · −
atpE · NC_084044.1 · 51,361–51,762 bp · −
atpB · NC_084044.1 · 51,759–53,255 bp · −
psbJ · NC_084044.1 · 62,708–62,830 bp · −
psbL · NC_084044.1 · 62,960–63,076 bp · −
psbF · NC_084044.1 · 63,100–63,219 bp · −
psbE · NC_084044.1 · 63,234–63,485 bp · −
trnW-CCA · NC_084044.1 · 64,894–64,967 bp · −
trnP-UGG · NC_084044.1 · 65,142–65,215 bp · −
rpl20 · NC_084044.1 · 66,981–67,367 bp · −
rps12 · NC_084044.1 · 68,169–68,282 bp · −
rps12 · NC_084044.1 · 95,529–96,322 bp · −
clpP · NC_084044.1 · 68,406–70,310 bp · −
psbN · NC_084044.1 · 72,641–72,772 bp · −
rpoA · NC_084044.1 · 76,141–77,148 bp · −
rps11 · NC_084044.1 · 77,218–77,634 bp · −
rpl36 · NC_084044.1 · 77,746–77,859 bp · −
infA · NC_084044.1 · 77,955–78,188 bp · −
rps8 · NC_084044.1 · 78,310–78,714 bp · −
rpl14 · NC_084044.1 · 78,887–79,255 bp · −
rpl16 · NC_084044.1 · 79,386–80,661 bp · −
rps3 · NC_084044.1 · 80,804–81,466 bp · −
rpl22 · NC_084044.1 · 81,451–81,918 bp · −
rps19 · NC_084044.1 · 81,988–82,266 bp · −
rpl2 · NC_084044.1 · 82,328–83,819 bp · −
rpl23 · NC_084044.1 · 83,838–84,119 bp · −
trnI-CAU · NC_084044.1 · 84,285–84,358 bp · −
trnL-CAA · NC_084044.1 · 91,886–91,966 bp · −
ndhB · NC_084044.1 · 92,526–94,679 bp · −
rps7 · NC_084044.1 · 95,008–95,475 bp · −
trnN-GUU · NC_084044.1 · 106,438–106,509 bp · −
ndhF · NC_084044.1 · 108,569–110,089 bp · −
ndhD · NC_084044.1 · 112,758–114,299 bp · −
psaC · NC_084044.1 · 114,394–114,639 bp · −
ndhE · NC_084044.1 · 114,890–115,192 bp · −
ndhG · NC_084044.1 · 115,408–115,938 bp · −
ndhI · NC_084044.1 · 116,305–116,811 bp · −
ndhA · NC_084044.1 · 116,892–118,991 bp · −
ndhH · NC_084044.1 · 118,993–120,174 bp · −
rps15 · NC_084044.1 · 120,274–120,546 bp · −
ycf1 · NC_084044.1 · 120,953–126,589 bp · −
trnR-ACG · NC_084044.1 · 127,382–127,455 bp · −
rrn5 · NC_084044.1 · 127,699–127,819 bp · −
rrn4.5 · NC_084044.1 · 128,075–128,177 bp · −
rrn23 · NC_084044.1 · 128,278–131,086 bp · −
trnA-UGC · NC_084044.1 · 131,252–132,128 bp · −
trnI-GAU · NC_084044.1 · 132,193–133,211 bp · −
rrn16 · NC_084044.1 · 133,510–135,000 bp · −
trnV-GAC · NC_084044.1 · 135,227–135,298 bp · −
ycf15 · NC_084044.1 · 141,692–141,940 bp · −
ycf2 · NC_084044.1 · 142,031–148,870 bp · −
psbK · NC_084044.1 · 7,131–7,316 bp · +
psbI · NC_084044.1 · 7,709–7,819 bp · +
trnG-UCC · NC_084044.1 · 8,761–9,516 bp · +
trnR-UCU · NC_084044.1 · 9,692–9,763 bp · +
trnC-GCA · NC_084044.1 · 27,737–27,807 bp · +
petN · NC_084044.1 · 27,963–28,052 bp · +
trnT-GGU · NC_084044.1 · 30,464–30,535 bp · +
psbD · NC_084044.1 · 31,908–32,969 bp · +
psbC · NC_084044.1 · 32,917–34,338 bp · +
psbZ · NC_084044.1 · 34,997–35,185 bp · +
trnG-GCC · NC_084044.1 · 35,463–35,533 bp · +
trnS-GGA · NC_084044.1 · 44,312–44,398 bp · +
trnL-UAA · NC_084044.1 · 46,372–46,946 bp · +
trnF-GAA · NC_084044.1 · 47,234–47,306 bp · +
trnM-CAU · NC_084044.1 · 51,099–51,171 bp · +
rbcL · NC_084044.1 · 54,030–55,484 bp · +
accD · NC_084044.1 · 56,156–57,625 bp · +
psaI · NC_084044.1 · 58,089–58,199 bp · +
ycf4 · NC_084044.1 · 58,644–59,198 bp · +
cemA · NC_084044.1 · 59,840–60,529 bp · +
petA · NC_084044.1 · 60,751–61,713 bp · +
petL · NC_084044.1 · 64,393–64,488 bp · +
petG · NC_084044.1 · 64,666–64,779 bp · +
psaJ · NC_084044.1 · 65,493–65,627 bp · +
rpl33 · NC_084044.1 · 66,066–66,266 bp · +
rps18 · NC_084044.1 · 66,439–66,744 bp · +
rps12 · NC_084044.1 · 136,995–137,788 bp · +
psbB · NC_084044.1 · 70,755–72,281 bp · +
psbT · NC_084044.1 · 72,474–72,575 bp · +
psbH · NC_084044.1 · 72,878–73,099 bp · +
petB · NC_084044.1 · 73,233–74,593 bp · +
petD · NC_084044.1 · 74,781–75,964 bp · +
ycf2 · NC_084044.1 · 84,447–91,286 bp · +
ycf15 · NC_084044.1 · 91,377–91,625 bp · +
trnV-GAC · NC_084044.1 · 98,019–98,090 bp · +
rrn16 · NC_084044.1 · 98,317–99,807 bp · +
trnI-GAU · NC_084044.1 · 100,106–101,124 bp · +
trnA-UGC · NC_084044.1 · 101,189–102,065 bp · +
rrn23 · NC_084044.1 · 102,231–105,039 bp · +
rrn4.5 · NC_084044.1 · 105,140–105,242 bp · +
rrn5 · NC_084044.1 · 105,498–105,618 bp · +
trnR-ACG · NC_084044.1 · 105,862–105,935 bp · +
ycf1 · NC_084044.1 · 106,728–107,888 bp · +
rpl32 · NC_084044.1 · 110,546–110,716 bp · +
trnL-UAG · NC_084044.1 · 111,364–111,443 bp · +
ccsA · NC_084044.1 · 111,540–112,517 bp · +
trnN-GUU · NC_084044.1 · 126,808–126,879 bp · +
rps7 · NC_084044.1 · 137,842–138,309 bp · +
ndhB · NC_084044.1 · 138,638–140,791 bp · +
trnL-CAA · NC_084044.1 · 141,351–141,431 bp · +
trnI-CAU · NC_084044.1 · 148,959–149,032 bp · +
rpl23 · NC_084044.1 · 149,198–149,479 bp · +
rpl2 · NC_084044.1 · 149,498–150,989 bp · +
rps19 · NC_084044.1 · 149,498–150,989 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Salvia leucantha
ANNOTATED PLASTOME
NC_084044.1
151,038 bp · 134 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37760 75519 113278 151038 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG ycf1 rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2 rps19
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
135 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 3 76 74 Locate
psbA gene − 393 1451 1059 Locate
trnK-UUU gene − 1683 4248 2566 Locate
matK gene − 1987 3522 1536 Locate
rps16 gene − 4818 5916 1099 Locate
trnQ-UUG gene − 6674 6745 72 Locate
psbK gene + 7131 7316 186 Locate
psbI gene + 7709 7819 111 Locate
trnS-GCU gene − 7969 8056 88 Locate
trnG-UCC gene + 8761 9516 756 Locate
trnR-UCU gene + 9692 9763 72 Locate
atpA gene − 9874 11397 1524 Locate
atpF gene − 11496 12754 1259 Locate
atpH gene − 13028 13273 246 Locate
atpI gene − 14287 15030 744 Locate
rps2 gene − 15254 15964 711 Locate
rpoC2 gene − 16169 20356 4188 Locate
rpoC1 gene − 20523 23334 2812 Locate
rpoB gene − 23361 26573 3213 Locate
trnC-GCA gene + 27737 27807 71 Locate
petN gene + 27963 28052 90 Locate
psbM gene − 29035 29139 105 Locate
trnD-GUC gene − 29510 29583 74 Locate
trnY-GUA gene − 29696 29779 84 Locate
trnE-UUC gene − 29850 29922 73 Locate
trnT-GGU gene + 30464 30535 72 Locate
psbD gene + 31908 32969 1062 Locate
psbC gene + 32917 34338 1422 Locate
trnS-UGA gene − 34577 34669 93 Locate
psbZ gene + 34997 35185 189 Locate
trnG-GCC gene + 35463 35533 71 Locate
trnfM-CAU gene − 35690 35763 74 Locate
rps14 gene − 35908 36210 303 Locate
psaB gene − 36334 38538 2205 Locate
psaA gene − 38564 40816 2253 Locate
ycf3 gene − 41546 43479 1934 Locate
trnS-GGA gene + 44312 44398 87 Locate
rps4 gene − 44676 45281 606 Locate
trnT-UGU gene − 45642 45714 73 Locate
trnL-UAA gene + 46372 46946 575 Locate
trnF-GAA gene + 47234 47306 73 Locate
ndhJ gene − 47783 48259 477 Locate
ndhK gene − 48370 49047 678 Locate
ndhC gene − 49099 49461 363 Locate
trnV-UAC gene − 50266 50918 653 Locate
trnM-CAU gene + 51099 51171 73 Locate
atpE gene − 51361 51762 402 Locate
atpB gene − 51759 53255 1497 Locate
rbcL gene + 54030 55484 1455 Locate
accD gene + 56156 57625 1470 Locate
psaI gene + 58089 58199 111 Locate
ycf4 gene + 58644 59198 555 Locate
cemA gene + 59840 60529 690 Locate
petA gene + 60751 61713 963 Locate
psbJ gene − 62708 62830 123 Locate
psbL gene − 62960 63076 117 Locate
psbF gene − 63100 63219 120 Locate
psbE gene − 63234 63485 252 Locate
petL gene + 64393 64488 96 Locate
petG gene + 64666 64779 114 Locate
trnW-CCA gene − 64894 64967 74 Locate
trnP-UGG gene − 65142 65215 74 Locate
psaJ gene + 65493 65627 135 Locate
rpl33 gene + 66066 66266 201 Locate
rps18 gene + 66439 66744 306 Locate
rpl20 gene − 66981 67367 387 Locate
rps12 gene − 68169 68282 114 Locate
clpP gene − 68406 70310 1905 Locate
psbB gene + 70755 72281 1527 Locate
psbT gene + 72474 72575 102 Locate
psbN gene − 72641 72772 132 Locate
psbH gene + 72878 73099 222 Locate
petB gene + 73233 74593 1361 Locate
petD gene + 74781 75964 1184 Locate
rpoA gene − 76141 77148 1008 Locate
rps11 gene − 77218 77634 417 Locate
rpl36 gene − 77746 77859 114 Locate
infA gene − 77955 78188 234 Locate
rps8 gene − 78310 78714 405 Locate
rpl14 gene − 78887 79255 369 Locate
rpl16 gene − 79386 80661 1276 Locate
rps3 gene − 80804 81466 663 Locate
rpl22 gene − 81451 81918 468 Locate
rps19 gene − 81988 82266 279 Locate
rpl2 gene − 82328 83819 1492 Locate
rpl23 gene − 83838 84119 282 Locate
trnI-CAU gene − 84285 84358 74 Locate
ycf2 gene + 84447 91286 6840 Locate
ycf15 gene + 91377 91625 249 Locate
trnL-CAA gene − 91886 91966 81 Locate
ndhB gene − 92526 94679 2154 Locate
rps7 gene − 95008 95475 468 Locate
rps12 gene − 95529 96322 794 Locate
trnV-GAC gene + 98019 98090 72 Locate
rrn16 gene + 98317 99807 1491 Locate
trnI-GAU gene + 100106 101124 1019 Locate
trnA-UGC gene + 101189 102065 877 Locate
rrn23 gene + 102231 105039 2809 Locate
rrn4.5 gene + 105140 105242 103 Locate
rrn5 gene + 105498 105618 121 Locate
trnR-ACG gene + 105862 105935 74 Locate
trnN-GUU gene − 106438 106509 72 Locate
ycf1 gene + 106728 107888 1161 Locate
ndhF gene − 108569 110089 1521 Locate
rpl32 gene + 110546 110716 171 Locate
trnL-UAG gene + 111364 111443 80 Locate
ccsA gene + 111540 112517 978 Locate
ndhD gene − 112758 114299 1542 Locate
psaC gene − 114394 114639 246 Locate
ndhE gene − 114890 115192 303 Locate
ndhG gene − 115408 115938 531 Locate
ndhI gene − 116305 116811 507 Locate
ndhA gene − 116892 118991 2100 Locate
ndhH gene − 118993 120174 1182 Locate
rps15 gene − 120274 120546 273 Locate
ycf1 gene − 120953 126589 5637 Locate
trnN-GUU gene + 126808 126879 72 Locate
trnR-ACG gene − 127382 127455 74 Locate
rrn5 gene − 127699 127819 121 Locate
rrn4.5 gene − 128075 128177 103 Locate
rrn23 gene − 128278 131086 2809 Locate
trnA-UGC gene − 131252 132128 877 Locate
trnI-GAU gene − 132193 133211 1019 Locate
rrn16 gene − 133510 135000 1491 Locate
trnV-GAC gene − 135227 135298 72 Locate
rps12 gene + 136995 137788 794 Locate
rps7 gene + 137842 138309 468 Locate
ndhB gene + 138638 140791 2154 Locate
trnL-CAA gene + 141351 141431 81 Locate
ycf15 gene − 141692 141940 249 Locate
ycf2 gene − 142031 148870 6840 Locate
trnI-CAU gene + 148959 149032 74 Locate
rpl23 gene + 149198 149479 282 Locate
rpl2 gene + 149498 150989 1492 Locate
rps19 gene + 149498 150989 1492 Locate
Status Available
Accession NC_084044.1
Length 151,038 bp
GC content 38.0%
Annotated genes 134
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 15 Ribosomal Protein 27 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources