Coordinate-aware organelle record

Salvia leucantha chloroplast genome

Available NC_084044.1 151,038 bp 134 coordinate-linked features
LSCIRSSCIR0 kb13 kb26 kb39 kb52 kb65 kb78 kb91 kb104 kb117 kb130 kb143 kbtrnH-GUG · gene · 3-76 bp · − strandpsbA · gene · 393-1,451 bp · − strandtrnK-UUU · gene · 1,683-4,248 bp · − strandmatK · gene · 1,987-3,522 bp · − strandrps16 · gene · 4,818-5,916 bp · − strandtrnQ-UUG · gene · 6,674-6,745 bp · − strandpsbK · gene · 7,131-7,316 bp · + strandpsbI · gene · 7,709-7,819 bp · + strandtrnS-GCU · gene · 7,969-8,056 bp · − strandtrnG-UCC · gene · 8,761-9,516 bp · + strandtrnR-UCU · gene · 9,692-9,763 bp · + strandatpA · gene · 9,874-11,397 bp · − strandatpF · gene · 11,496-12,754 bp · − strandatpH · gene · 13,028-13,273 bp · − strandatpI · gene · 14,287-15,030 bp · − strandrps2 · gene · 15,254-15,964 bp · − strandrpoC2 · gene · 16,169-20,356 bp · − strandrpoC1 · gene · 20,523-23,334 bp · − strandrpoB · gene · 23,361-26,573 bp · − strandtrnC-GCA · gene · 27,737-27,807 bp · + strandpetN · gene · 27,963-28,052 bp · + strandpsbM · gene · 29,035-29,139 bp · − strandtrnD-GUC · gene · 29,510-29,583 bp · − strandtrnY-GUA · gene · 29,696-29,779 bp · − strandtrnE-UUC · gene · 29,850-29,922 bp · − strandtrnT-GGU · gene · 30,464-30,535 bp · + strandpsbD · gene · 31,908-32,969 bp · + strandpsbC · gene · 32,917-34,338 bp · + strandtrnS-UGA · gene · 34,577-34,669 bp · − strandpsbZ · gene · 34,997-35,185 bp · + strandtrnG-GCC · gene · 35,463-35,533 bp · + strandtrnfM-CAU · gene · 35,690-35,763 bp · − strandrps14 · gene · 35,908-36,210 bp · − strandpsaB · gene · 36,334-38,538 bp · − strandpsaA · gene · 38,564-40,816 bp · − strandycf3 · gene · 41,546-43,479 bp · − strandtrnS-GGA · gene · 44,312-44,398 bp · + strandrps4 · gene · 44,676-45,281 bp · − strandtrnT-UGU · gene · 45,642-45,714 bp · − strandtrnL-UAA · gene · 46,372-46,946 bp · + strandtrnF-GAA · gene · 47,234-47,306 bp · + strandndhJ · gene · 47,783-48,259 bp · − strandndhK · gene · 48,370-49,047 bp · − strandndhC · gene · 49,099-49,461 bp · − strandtrnV-UAC · gene · 50,266-50,918 bp · − strandtrnM-CAU · gene · 51,099-51,171 bp · + strandatpE · gene · 51,361-51,762 bp · − strandatpB · gene · 51,759-53,255 bp · − strandrbcL · gene · 54,030-55,484 bp · + strandaccD · gene · 56,156-57,625 bp · + strandpsaI · gene · 58,089-58,199 bp · + strandycf4 · gene · 58,644-59,198 bp · + strandcemA · gene · 59,840-60,529 bp · + strandpetA · gene · 60,751-61,713 bp · + strandpsbJ · gene · 62,708-62,830 bp · − strandpsbL · gene · 62,960-63,076 bp · − strandpsbF · gene · 63,100-63,219 bp · − strandpsbE · gene · 63,234-63,485 bp · − strandpetL · gene · 64,393-64,488 bp · + strandpetG · gene · 64,666-64,779 bp · + strandtrnW-CCA · gene · 64,894-64,967 bp · − strandtrnP-UGG · gene · 65,142-65,215 bp · − strandpsaJ · gene · 65,493-65,627 bp · + strandrpl33 · gene · 66,066-66,266 bp · + strandrps18 · gene · 66,439-66,744 bp · + strandrpl20 · gene · 66,981-67,367 bp · − strandrps12 · gene · 68,169-96,322 bp · − strandrps12 · gene · 68,169-137,788 bp · + strandclpP · gene · 68,406-70,310 bp · − strandpsbB · gene · 70,755-72,281 bp · + strandpsbT · gene · 72,474-72,575 bp · + strandpsbN · gene · 72,641-72,772 bp · − strandpsbH · gene · 72,878-73,099 bp · + strandpetB · gene · 73,233-74,593 bp · + strandpetD · gene · 74,781-75,964 bp · + strandrpoA · gene · 76,141-77,148 bp · − strandrps11 · gene · 77,218-77,634 bp · − strandrpl36 · gene · 77,746-77,859 bp · − strandinfA · gene · 77,955-78,188 bp · − strandrps8 · gene · 78,310-78,714 bp · − strandrpl14 · gene · 78,887-79,255 bp · − strandrpl16 · gene · 79,386-80,661 bp · − strandrps3 · gene · 80,804-81,466 bp · − strandrpl22 · gene · 81,451-81,918 bp · − strandrps19 · gene · 81,988-82,266 bp · − strandrpl2 · gene · 82,328-83,819 bp · − strandrpl23 · gene · 83,838-84,119 bp · − strandtrnI-CAU · gene · 84,285-84,358 bp · − strandycf2 · gene · 84,447-91,286 bp · + strandycf15 · gene · 91,377-91,625 bp · + strandtrnL-CAA · gene · 91,886-91,966 bp · − strandndhB · gene · 92,526-94,679 bp · − strandrps7 · gene · 95,008-95,475 bp · − strandtrnV-GAC · gene · 98,019-98,090 bp · + strandrrn16 · gene · 98,317-99,807 bp · + strandtrnI-GAU · gene · 100,106-101,124 bp · + strandtrnA-UGC · gene · 101,189-102,065 bp · + strandrrn23 · gene · 102,231-105,039 bp · + strandrrn4.5 · gene · 105,140-105,242 bp · + strandrrn5 · gene · 105,498-105,618 bp · + strandtrnR-ACG · gene · 105,862-105,935 bp · + strandtrnN-GUU · gene · 106,438-106,509 bp · − strandycf1 · gene · 106,728-107,888 bp · + strandndhF · gene · 108,569-110,089 bp · − strandrpl32 · gene · 110,546-110,716 bp · + strandtrnL-UAG · gene · 111,364-111,443 bp · + strandccsA · gene · 111,540-112,517 bp · + strandndhD · gene · 112,758-114,299 bp · − strandpsaC · gene · 114,394-114,639 bp · − strandndhE · gene · 114,890-115,192 bp · − strandndhG · gene · 115,408-115,938 bp · − strandndhI · gene · 116,305-116,811 bp · − strandndhA · gene · 116,892-118,991 bp · − strandndhH · gene · 118,993-120,174 bp · − strandrps15 · gene · 120,274-120,546 bp · − strandycf1 · gene · 120,953-126,589 bp · − strandtrnN-GUU · gene · 126,808-126,879 bp · + strandtrnR-ACG · gene · 127,382-127,455 bp · − strandrrn5 · gene · 127,699-127,819 bp · − strandrrn4.5 · gene · 128,075-128,177 bp · − strandrrn23 · gene · 128,278-131,086 bp · − strandtrnA-UGC · gene · 131,252-132,128 bp · − strandtrnI-GAU · gene · 132,193-133,211 bp · − strandrrn16 · gene · 133,510-135,000 bp · − strandtrnV-GAC · gene · 135,227-135,298 bp · − strandrps7 · gene · 137,842-138,309 bp · + strandndhB · gene · 138,638-140,791 bp · + strandtrnL-CAA · gene · 141,351-141,431 bp · + strandycf15 · gene · 141,692-141,940 bp · − strandycf2 · gene · 142,031-148,870 bp · − strandtrnI-CAU · gene · 148,959-149,032 bp · + strandrpl23 · gene · 149,198-149,479 bp · + strandrpl2 · gene · 149,498-150,989 bp · + strandrps19 · gene · 149,498-150,989 bp · + strandSalvia leucanthaANNOTATED PLASTOMENC_084044.1151,038 bp · 134 genesOuter ring: forward strand · inner ring: reverse strand · click a gene to open its pageGene functionTranslation RnaPhotosystem IiOtherRibosomal ProteinAtp SynthaseRna PolymeraseCytochromePhotosystem INad DehydrogenaseRibosomal RnaVerified annotationSource: NCBI GenBankAccession: NC_084044.1Features: 134 coordinate-linked genesHover for coordinates · click for gene page

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

134 features
GeneTypeGroupStrandStartEndLength
trnH-GUGgenetranslation-rna−27674
psbAgenephotosystem-ii−39214511059
trnK-UUUgenetranslation-rna−168242482566
matKgeneother−198635221536
rps16generibosomal-protein−481759161099
trnQ-UUGgenetranslation-rna−6673674572
psbKgenephotosystem-ii+71307316186
psbIgenephotosystem-ii+77087819111
trnS-GCUgenetranslation-rna−7968805688
trnG-UCCgenetranslation-rna+87609516756
trnR-UCUgenetranslation-rna+9691976372
atpAgeneatp-synthase−9873113971524
atpFgeneatp-synthase−11495127541259
atpHgeneatp-synthase−1302713273246
atpIgeneatp-synthase−1428615030744
rps2generibosomal-protein−1525315964711
rpoC2generna-polymerase−16168203564188
rpoC1generna-polymerase−20522233342812
rpoBgenerna-polymerase−23360265733213
trnC-GCAgenetranslation-rna+277362780771
petNgenecytochrome+279622805290
psbMgenephotosystem-ii−2903429139105
trnD-GUCgenetranslation-rna−295092958374
trnY-GUAgenetranslation-rna−296952977984
trnE-UUCgenetranslation-rna−298492992273
trnT-GGUgenetranslation-rna+304633053572
psbDgenephotosystem-ii+31907329691062
psbCgenephotosystem-ii+32916343381422
trnS-UGAgenetranslation-rna−345763466993
psbZgenephotosystem-ii+3499635185189
trnG-GCCgenetranslation-rna+354623553371
trnfM-CAUgenetranslation-rna−356893576374
rps14generibosomal-protein−3590736210303
psaBgenephotosystem-i−36333385382205
psaAgenephotosystem-i−38563408162253
ycf3geneother−41545434791934
trnS-GGAgenetranslation-rna+443114439887
rps4generibosomal-protein−4467545281606
trnT-UGUgenetranslation-rna−456414571473
trnL-UAAgenetranslation-rna+4637146946575
trnF-GAAgenetranslation-rna+472334730673
ndhJgenenad-dehydrogenase−4778248259477
ndhKgenenad-dehydrogenase−4836949047678
ndhCgenenad-dehydrogenase−4909849461363
trnV-UACgenetranslation-rna−5026550918653
trnM-CAUgenetranslation-rna+510985117173
atpEgeneatp-synthase−5136051762402
atpBgeneatp-synthase−51758532551497
rbcLgeneother+54029554841455
accDgeneother+56155576251470
psaIgenephotosystem-i+5808858199111
ycf4geneother+5864359198555
cemAgeneother+5983960529690
petAgenecytochrome+6075061713963
psbJgenephotosystem-ii−6270762830123
psbLgenephotosystem-ii−6295963076117
psbFgenephotosystem-ii−6309963219120
psbEgenephotosystem-ii−6323363485252
petLgenecytochrome+643926448896
petGgenecytochrome+6466564779114
trnW-CCAgenetranslation-rna−648936496774
trnP-UGGgenetranslation-rna−651416521574
psaJgenephotosystem-i+6549265627135
rpl33generibosomal-protein+6606566266201
rps18generibosomal-protein+6643866744306
rpl20generibosomal-protein−6698067367387
rps12generibosomal-protein−681689632228154
rps12generibosomal-protein+6816813778869620
clpPgeneother−68405703101905
psbBgenephotosystem-ii+70754722811527
psbTgenephotosystem-ii+7247372575102
psbNgenephotosystem-ii−7264072772132
psbHgenephotosystem-ii+7287773099222
petBgenecytochrome+73232745931361
petDgenecytochrome+74780759641184
rpoAgenerna-polymerase−76140771481008
rps11generibosomal-protein−7721777634417
rpl36generibosomal-protein−7774577859114
infAgeneother−7795478188234
rps8generibosomal-protein−7830978714405
rpl14generibosomal-protein−7888679255369
rpl16generibosomal-protein−79385806611276
rps3generibosomal-protein−8080381466663
rpl22generibosomal-protein−8145081918468
rps19generibosomal-protein−8198782266279
rpl2generibosomal-protein−82327838191492
rpl23generibosomal-protein−8383784119282
trnI-CAUgenetranslation-rna−842848435874
ycf2geneother+84446912866840
ycf15geneother+9137691625249
trnL-CAAgenetranslation-rna−918859196681
ndhBgenenad-dehydrogenase−92525946792154
rps7generibosomal-protein−9500795475468
trnV-GACgenetranslation-rna+980189809072
rrn16generibosomal-rna+98316998071491
trnI-GAUgenetranslation-rna+1001051011241019
trnA-UGCgenetranslation-rna+101188102065877
rrn23generibosomal-rna+1022301050392809
rrn4.5generibosomal-rna+105139105242103
rrn5generibosomal-rna+105497105618121
trnR-ACGgenetranslation-rna+10586110593574
trnN-GUUgenetranslation-rna−10643710650972
ycf1geneother+1067271078881161
ndhFgenenad-dehydrogenase−1085681100891521
rpl32generibosomal-protein+110545110716171
trnL-UAGgenetranslation-rna+11136311144380
ccsAgeneother+111539112517978
ndhDgenenad-dehydrogenase−1127571142991542
psaCgenephotosystem-i−114393114639246
ndhEgenenad-dehydrogenase−114889115192303
ndhGgenenad-dehydrogenase−115407115938531
ndhIgenenad-dehydrogenase−116304116811507
ndhAgenenad-dehydrogenase−1168911189912100
ndhHgenenad-dehydrogenase−1189921201741182
rps15generibosomal-protein−120273120546273
ycf1geneother−1209521265895637
trnN-GUUgenetranslation-rna+12680712687972
trnR-ACGgenetranslation-rna−12738112745574
rrn5generibosomal-rna−127698127819121
rrn4.5generibosomal-rna−128074128177103
rrn23generibosomal-rna−1282771310862809
trnA-UGCgenetranslation-rna−131251132128877
trnI-GAUgenetranslation-rna−1321921332111019
rrn16generibosomal-rna−1335091350001491
trnV-GACgenetranslation-rna−13522613529872
rps7generibosomal-protein+137841138309468
ndhBgenenad-dehydrogenase+1386371407912154
trnL-CAAgenetranslation-rna+14135014143181
ycf15geneother−141691141940249
ycf2geneother−1420301488706840
trnI-CAUgenetranslation-rna+14895814903274
rpl23generibosomal-protein+149197149479282
rpl2generibosomal-protein+1494971509891492
rps19generibosomal-protein+1494971509891492

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources