Salvia liguliloba chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
LSC
IR
SSC
IR
trnH-GUG · NC_067742.1 · 11–84 bp · −
psbA · NC_067742.1 · 392–1,450 bp · −
trnK-UUU · NC_067742.1 · 1,673–4,266 bp · −
matK · NC_067742.1 · 1,972–3,534 bp · −
rps16 · NC_067742.1 · 4,830–5,940 bp · −
trnQ-UUG · NC_067742.1 · 6,910–6,981 bp · −
trnS-GCU · NC_067742.1 · 8,225–8,312 bp · −
atpA · NC_067742.1 · 10,123–11,646 bp · −
atpF · NC_067742.1 · 11,743–12,990 bp · −
atpH · NC_067742.1 · 13,263–13,508 bp · −
atpI · NC_067742.1 · 14,479–15,222 bp · −
rps2 · NC_067742.1 · 15,449–16,159 bp · −
rpoC2 · NC_067742.1 · 16,368–20,555 bp · −
rpoC1 · NC_067742.1 · 20,713–23,526 bp · −
rpoB · NC_067742.1 · 23,553–26,765 bp · −
psbM · NC_067742.1 · 29,209–29,313 bp · −
trnD-GUC · NC_067742.1 · 29,834–29,907 bp · −
trnY-GUA · NC_067742.1 · 30,018–30,101 bp · −
trnE-UUC · NC_067742.1 · 30,173–30,245 bp · −
trnS-UGA · NC_067742.1 · 34,911–35,003 bp · −
trnfM-CAU · NC_067742.1 · 36,048–36,121 bp · −
rps14 · NC_067742.1 · 36,266–36,568 bp · −
psaB · NC_067742.1 · 36,691–38,895 bp · −
psaA · NC_067742.1 · 38,921–41,173 bp · −
ycf3 · NC_067742.1 · 41,964–43,895 bp · −
rps4 · NC_067742.1 · 45,075–45,680 bp · −
trnT-UGU · NC_067742.1 · 46,052–46,124 bp · −
ndhJ · NC_067742.1 · 48,243–48,719 bp · −
ndhK · NC_067742.1 · 48,830–49,507 bp · −
ndhC · NC_067742.1 · 49,559–49,921 bp · −
trnV-UAC · NC_067742.1 · 50,871–51,519 bp · −
atpE · NC_067742.1 · 51,976–52,377 bp · −
atpB · NC_067742.1 · 52,374–53,870 bp · −
psbJ · NC_067742.1 · 63,316–63,438 bp · −
psbL · NC_067742.1 · 63,568–63,684 bp · −
psbF · NC_067742.1 · 63,708–63,827 bp · −
psbE · NC_067742.1 · 63,842–64,093 bp · −
trnW-CCA · NC_067742.1 · 65,402–65,475 bp · −
trnP-UGG · NC_067742.1 · 65,646–65,719 bp · −
rpl20 · NC_067742.1 · 67,494–67,880 bp · −
rps12 · NC_067742.1 · 68,692–68,805 bp · −
rps12 · NC_067742.1 · 96,062–96,845 bp · −
clpP · NC_067742.1 · 68,929–70,840 bp · −
psbN · NC_067742.1 · 73,163–73,294 bp · −
rpoA · NC_067742.1 · 76,670–77,677 bp · −
rps11 · NC_067742.1 · 77,749–78,165 bp · −
rpl36 · NC_067742.1 · 78,275–78,388 bp · −
infA · NC_067742.1 · 78,484–78,717 bp · −
rps8 · NC_067742.1 · 78,844–79,248 bp · −
rpl14 · NC_067742.1 · 79,438–79,806 bp · −
rpl16 · NC_067742.1 · 79,938–81,218 bp · −
rps3 · NC_067742.1 · 81,354–82,016 bp · −
rpl22 · NC_067742.1 · 82,001–82,468 bp · −
rps19 · NC_067742.1 · 82,538–82,816 bp · −
rpl2 · NC_067742.1 · 82,876–84,358 bp · −
rpl23 · NC_067742.1 · 84,377–84,658 bp · −
trnI-CAU · NC_067742.1 · 84,824–84,897 bp · −
trnL-CAA · NC_067742.1 · 92,419–92,499 bp · −
ndhB · NC_067742.1 · 93,059–95,212 bp · −
rps7 · NC_067742.1 · 95,541–96,008 bp · −
trnN-GUU · NC_067742.1 · 106,838–106,909 bp · −
ndhF · NC_067742.1 · 108,263–110,497 bp · −
ndhD · NC_067742.1 · 113,187–114,728 bp · −
psaC · NC_067742.1 · 114,838–115,083 bp · −
ndhE · NC_067742.1 · 115,334–115,636 bp · −
ndhG · NC_067742.1 · 115,855–116,385 bp · −
ndhI · NC_067742.1 · 116,762–117,268 bp · −
ndhA · NC_067742.1 · 117,349–119,425 bp · −
ndhH · NC_067742.1 · 119,427–120,662 bp · −
rps15 · NC_067742.1 · 120,708–120,980 bp · −
ycf1 · NC_067742.1 · 121,406–127,033 bp · −
trnR-ACG · NC_067742.1 · 127,843–127,916 bp · −
rrn5 · NC_067742.1 · 128,160–128,280 bp · −
rrn4.5 · NC_067742.1 · 128,505–128,607 bp · −
rrn23 · NC_067742.1 · 128,708–131,516 bp · −
trnA-UGC · NC_067742.1 · 131,682–132,549 bp · −
trnI-GAU · NC_067742.1 · 132,614–133,625 bp · −
rrn16 · NC_067742.1 · 133,924–135,414 bp · −
trnV-GAC · NC_067742.1 · 135,641–135,712 bp · −
ycf15 · NC_067742.1 · 142,003–142,251 bp · −
ycf2 · NC_067742.1 · 142,342–149,175 bp · −
psbK · NC_067742.1 · 7,374–7,553 bp · +
psbI · NC_067742.1 · 7,950–8,060 bp · +
trnG-UCC · NC_067742.1 · 9,003–9,755 bp · +
trnR-UCU · NC_067742.1 · 9,940–10,011 bp · +
trnC-GCA · NC_067742.1 · 27,910–27,980 bp · +
petN · NC_067742.1 · 28,143–28,232 bp · +
trnT-GGU · NC_067742.1 · 30,784–30,855 bp · +
psbD · NC_067742.1 · 32,235–33,296 bp · +
psbC · NC_067742.1 · 33,244–34,665 bp · +
psbZ · NC_067742.1 · 35,338–35,526 bp · +
trnG-GCC · NC_067742.1 · 35,798–35,868 bp · +
trnS-GGA · NC_067742.1 · 44,712–44,798 bp · +
trnL-UAA · NC_067742.1 · 46,800–47,339 bp · +
trnF-GAA · NC_067742.1 · 47,638–47,710 bp · +
trnM-CAU · NC_067742.1 · 51,708–51,780 bp · +
rbcL · NC_067742.1 · 54,634–56,088 bp · +
accD · NC_067742.1 · 56,779–58,266 bp · +
psaI · NC_067742.1 · 58,729–58,839 bp · +
ycf4 · NC_067742.1 · 59,294–59,848 bp · +
cemA · NC_067742.1 · 60,396–61,085 bp · +
petA · NC_067742.1 · 61,291–62,253 bp · +
petL · NC_067742.1 · 64,900–64,995 bp · +
petG · NC_067742.1 · 65,174–65,287 bp · +
psaJ · NC_067742.1 · 65,971–66,144 bp · +
rpl33 · NC_067742.1 · 66,596–66,796 bp · +
rps18 · NC_067742.1 · 66,957–67,262 bp · +
rps12 · NC_067742.1 · 137,316–138,099 bp · +
psbB · NC_067742.1 · 71,289–72,815 bp · +
psbT · NC_067742.1 · 72,995–73,102 bp · +
psbH · NC_067742.1 · 73,400–73,621 bp · +
petB · NC_067742.1 · 73,747–75,097 bp · +
petD · NC_067742.1 · 75,291–76,493 bp · +
ycf2 · NC_067742.1 · 84,986–91,819 bp · +
ycf15 · NC_067742.1 · 91,910–92,158 bp · +
trnV-GAC · NC_067742.1 · 98,449–98,520 bp · +
rrn16 · NC_067742.1 · 98,747–100,237 bp · +
trnI-GAU · NC_067742.1 · 100,536–101,547 bp · +
trnA-UGC · NC_067742.1 · 101,612–102,479 bp · +
rrn23 · NC_067742.1 · 102,645–105,453 bp · +
rrn4.5 · NC_067742.1 · 105,554–105,656 bp · +
rrn5 · NC_067742.1 · 105,881–106,001 bp · +
trnR-ACG · NC_067742.1 · 106,245–106,318 bp · +
ycf1 · NC_067742.1 · 107,128–108,294 bp · +
rpl32 · NC_067742.1 · 110,931–111,101 bp · +
trnL-UAG · NC_067742.1 · 111,806–111,885 bp · +
ccsA · NC_067742.1 · 111,930–112,955 bp · +
trnN-GUU · NC_067742.1 · 127,252–127,323 bp · +
rps7 · NC_067742.1 · 138,153–138,620 bp · +
ndhB · NC_067742.1 · 138,949–141,102 bp · +
trnL-CAA · NC_067742.1 · 141,662–141,742 bp · +
trnI-CAU · NC_067742.1 · 149,264–149,337 bp · +
rpl23 · NC_067742.1 · 149,503–149,784 bp · +
rpl2 · NC_067742.1 · 149,803–151,285 bp · +
rps19 · NC_067742.1 · 151,345–151,386 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Salvia liguliloba
ANNOTATED PLASTOME
NC_067742.1
151,387 bp · 134 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37847 75694 113540 151387 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG ycf1 rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2 rps19
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
135 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 11 84 74 Locate
psbA gene − 392 1450 1059 Locate
trnK-UUU gene − 1673 4266 2594 Locate
matK gene − 1972 3534 1563 Locate
rps16 gene − 4830 5940 1111 Locate
trnQ-UUG gene − 6910 6981 72 Locate
psbK gene + 7374 7553 180 Locate
psbI gene + 7950 8060 111 Locate
trnS-GCU gene − 8225 8312 88 Locate
trnG-UCC gene + 9003 9755 753 Locate
trnR-UCU gene + 9940 10011 72 Locate
atpA gene − 10123 11646 1524 Locate
atpF gene − 11743 12990 1248 Locate
atpH gene − 13263 13508 246 Locate
atpI gene − 14479 15222 744 Locate
rps2 gene − 15449 16159 711 Locate
rpoC2 gene − 16368 20555 4188 Locate
rpoC1 gene − 20713 23526 2814 Locate
rpoB gene − 23553 26765 3213 Locate
trnC-GCA gene + 27910 27980 71 Locate
petN gene + 28143 28232 90 Locate
psbM gene − 29209 29313 105 Locate
trnD-GUC gene − 29834 29907 74 Locate
trnY-GUA gene − 30018 30101 84 Locate
trnE-UUC gene − 30173 30245 73 Locate
trnT-GGU gene + 30784 30855 72 Locate
psbD gene + 32235 33296 1062 Locate
psbC gene + 33244 34665 1422 Locate
trnS-UGA gene − 34911 35003 93 Locate
psbZ gene + 35338 35526 189 Locate
trnG-GCC gene + 35798 35868 71 Locate
trnfM-CAU gene − 36048 36121 74 Locate
rps14 gene − 36266 36568 303 Locate
psaB gene − 36691 38895 2205 Locate
psaA gene − 38921 41173 2253 Locate
ycf3 gene − 41964 43895 1932 Locate
trnS-GGA gene + 44712 44798 87 Locate
rps4 gene − 45075 45680 606 Locate
trnT-UGU gene − 46052 46124 73 Locate
trnL-UAA gene + 46800 47339 540 Locate
trnF-GAA gene + 47638 47710 73 Locate
ndhJ gene − 48243 48719 477 Locate
ndhK gene − 48830 49507 678 Locate
ndhC gene − 49559 49921 363 Locate
trnV-UAC gene − 50871 51519 649 Locate
trnM-CAU gene + 51708 51780 73 Locate
atpE gene − 51976 52377 402 Locate
atpB gene − 52374 53870 1497 Locate
rbcL gene + 54634 56088 1455 Locate
accD gene + 56779 58266 1488 Locate
psaI gene + 58729 58839 111 Locate
ycf4 gene + 59294 59848 555 Locate
cemA gene + 60396 61085 690 Locate
petA gene + 61291 62253 963 Locate
psbJ gene − 63316 63438 123 Locate
psbL gene − 63568 63684 117 Locate
psbF gene − 63708 63827 120 Locate
psbE gene − 63842 64093 252 Locate
petL gene + 64900 64995 96 Locate
petG gene + 65174 65287 114 Locate
trnW-CCA gene − 65402 65475 74 Locate
trnP-UGG gene − 65646 65719 74 Locate
psaJ gene + 65971 66144 174 Locate
rpl33 gene + 66596 66796 201 Locate
rps18 gene + 66957 67262 306 Locate
rpl20 gene − 67494 67880 387 Locate
rps12 gene − 68692 68805 114 Locate
clpP gene − 68929 70840 1912 Locate
psbB gene + 71289 72815 1527 Locate
psbT gene + 72995 73102 108 Locate
psbN gene − 73163 73294 132 Locate
psbH gene + 73400 73621 222 Locate
petB gene + 73747 75097 1351 Locate
petD gene + 75291 76493 1203 Locate
rpoA gene − 76670 77677 1008 Locate
rps11 gene − 77749 78165 417 Locate
rpl36 gene − 78275 78388 114 Locate
infA gene − 78484 78717 234 Locate
rps8 gene − 78844 79248 405 Locate
rpl14 gene − 79438 79806 369 Locate
rpl16 gene − 79938 81218 1281 Locate
rps3 gene − 81354 82016 663 Locate
rpl22 gene − 82001 82468 468 Locate
rps19 gene − 82538 82816 279 Locate
rpl2 gene − 82876 84358 1483 Locate
rpl23 gene − 84377 84658 282 Locate
trnI-CAU gene − 84824 84897 74 Locate
ycf2 gene + 84986 91819 6834 Locate
ycf15 gene + 91910 92158 249 Locate
trnL-CAA gene − 92419 92499 81 Locate
ndhB gene − 93059 95212 2154 Locate
rps7 gene − 95541 96008 468 Locate
rps12 gene − 96062 96845 784 Locate
trnV-GAC gene + 98449 98520 72 Locate
rrn16 gene + 98747 100237 1491 Locate
trnI-GAU gene + 100536 101547 1012 Locate
trnA-UGC gene + 101612 102479 868 Locate
rrn23 gene + 102645 105453 2809 Locate
rrn4.5 gene + 105554 105656 103 Locate
rrn5 gene + 105881 106001 121 Locate
trnR-ACG gene + 106245 106318 74 Locate
trnN-GUU gene − 106838 106909 72 Locate
ycf1 gene + 107128 108294 1167 Locate
ndhF gene − 108263 110497 2235 Locate
rpl32 gene + 110931 111101 171 Locate
trnL-UAG gene + 111806 111885 80 Locate
ccsA gene + 111930 112955 1026 Locate
ndhD gene − 113187 114728 1542 Locate
psaC gene − 114838 115083 246 Locate
ndhE gene − 115334 115636 303 Locate
ndhG gene − 115855 116385 531 Locate
ndhI gene − 116762 117268 507 Locate
ndhA gene − 117349 119425 2077 Locate
ndhH gene − 119427 120662 1236 Locate
rps15 gene − 120708 120980 273 Locate
ycf1 gene − 121406 127033 5628 Locate
trnN-GUU gene + 127252 127323 72 Locate
trnR-ACG gene − 127843 127916 74 Locate
rrn5 gene − 128160 128280 121 Locate
rrn4.5 gene − 128505 128607 103 Locate
rrn23 gene − 128708 131516 2809 Locate
trnA-UGC gene − 131682 132549 868 Locate
trnI-GAU gene − 132614 133625 1012 Locate
rrn16 gene − 133924 135414 1491 Locate
trnV-GAC gene − 135641 135712 72 Locate
rps12 gene + 137316 138099 784 Locate
rps7 gene + 138153 138620 468 Locate
ndhB gene + 138949 141102 2154 Locate
trnL-CAA gene + 141662 141742 81 Locate
ycf15 gene − 142003 142251 249 Locate
ycf2 gene − 142342 149175 6834 Locate
trnI-CAU gene + 149264 149337 74 Locate
rpl23 gene + 149503 149784 282 Locate
rpl2 gene + 149803 151285 1483 Locate
rps19 gene + 151345 151386 42 Locate
Status Available
Accession NC_067742.1
Length 151,387 bp
GC content 38.0%
Annotated genes 134
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 15 Ribosomal Protein 27 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources