Salvia meiliensis chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
LSC
IR
SSC
IR
trnH-GUG · NC_050896.1 · 11–84 bp · −
psbA · NC_050896.1 · 392–1,450 bp · −
trnK-UUU · NC_050896.1 · 1,673–4,265 bp · −
matK · NC_050896.1 · 1,998–3,527 bp · −
rps16 · NC_050896.1 · 4,837–5,941 bp · −
trnQ-UUG · NC_050896.1 · 6,916–6,987 bp · −
trnS-GCU · NC_050896.1 · 8,229–8,316 bp · −
atpA · NC_050896.1 · 10,125–11,648 bp · −
atpF · NC_050896.1 · 11,749–12,994 bp · −
atpH · NC_050896.1 · 13,268–13,513 bp · −
atpI · NC_050896.1 · 14,484–15,227 bp · −
rps2 · NC_050896.1 · 15,454–16,164 bp · −
rpoC2 · NC_050896.1 · 16,373–20,560 bp · −
rpoC1 · NC_050896.1 · 20,718–23,531 bp · −
rpoB · NC_050896.1 · 23,558–26,770 bp · −
psbM · NC_050896.1 · 29,211–29,315 bp · −
trnD-GUC · NC_050896.1 · 29,836–29,909 bp · −
trnY-GUA · NC_050896.1 · 30,020–30,103 bp · −
trnE-UUC · NC_050896.1 · 30,175–30,247 bp · −
trnS-UGA · NC_050896.1 · 34,913–35,005 bp · −
trnfM-CAU · NC_050896.1 · 36,051–36,124 bp · −
rps14 · NC_050896.1 · 36,269–36,571 bp · −
psaB · NC_050896.1 · 36,694–38,898 bp · −
psaA · NC_050896.1 · 38,924–41,176 bp · −
ycf3 · NC_050896.1 · 41,966–43,910 bp · −
rps4 · NC_050896.1 · 45,089–45,694 bp · −
trnT-UGU · NC_050896.1 · 46,064–46,136 bp · −
ndhJ · NC_050896.1 · 48,255–48,731 bp · −
ndhK · NC_050896.1 · 48,842–49,519 bp · −
ndhC · NC_050896.1 · 49,571–49,933 bp · −
trnV-UAC · NC_050896.1 · 50,905–51,558 bp · −
atpE · NC_050896.1 · 52,015–52,416 bp · −
atpB · NC_050896.1 · 52,413–53,909 bp · −
psbJ · NC_050896.1 · 63,376–63,498 bp · −
psbL · NC_050896.1 · 63,628–63,744 bp · −
psbF · NC_050896.1 · 63,768–63,887 bp · −
psbE · NC_050896.1 · 63,902–64,153 bp · −
trnW-CCA · NC_050896.1 · 65,475–65,548 bp · −
trnP-UGG · NC_050896.1 · 65,719–65,792 bp · −
rpl20 · NC_050896.1 · 67,575–67,961 bp · −
rps12 · NC_050896.1 · 68,775–68,888 bp · −
rps12 · NC_050896.1 · 96,143–96,926 bp · −
clpP · NC_050896.1 · 69,012–70,924 bp · −
psbN · NC_050896.1 · 73,248–73,379 bp · −
rpoA · NC_050896.1 · 76,751–77,758 bp · −
rps11 · NC_050896.1 · 77,831–78,247 bp · −
rpl36 · NC_050896.1 · 78,357–78,470 bp · −
infA · NC_050896.1 · 78,566–78,799 bp · −
rps8 · NC_050896.1 · 78,926–79,330 bp · −
rpl14 · NC_050896.1 · 79,518–79,886 bp · −
rpl16 · NC_050896.1 · 80,018–81,299 bp · −
rps3 · NC_050896.1 · 81,435–82,097 bp · −
rpl22 · NC_050896.1 · 82,082–82,549 bp · −
rps19 · NC_050896.1 · 82,619–82,897 bp · −
rpl2 · NC_050896.1 · 82,957–84,439 bp · −
rpl23 · NC_050896.1 · 84,458–84,739 bp · −
trnI-CAU · NC_050896.1 · 84,905–84,978 bp · −
trnL-CAA · NC_050896.1 · 92,500–92,580 bp · −
ndhB · NC_050896.1 · 93,140–95,293 bp · −
rps7 · NC_050896.1 · 95,622–96,089 bp · −
trnN-GUU · NC_050896.1 · 106,988–107,059 bp · −
ndhF · NC_050896.1 · 108,413–110,629 bp · −
ndhD · NC_050896.1 · 113,325–114,866 bp · −
psaC · NC_050896.1 · 114,988–115,233 bp · −
ndhE · NC_050896.1 · 115,484–115,789 bp · −
ndhG · NC_050896.1 · 116,010–116,540 bp · −
ndhI · NC_050896.1 · 116,911–117,417 bp · −
ndhA · NC_050896.1 · 117,498–119,574 bp · −
ndhH · NC_050896.1 · 119,576–120,811 bp · −
rps15 · NC_050896.1 · 120,857–121,129 bp · −
ycf1 · NC_050896.1 · 121,555–127,191 bp · −
trnR-CCG · NC_050896.1 · 128,001–128,074 bp · −
rrn5 · NC_050896.1 · 128,318–128,438 bp · −
rrn4.5 · NC_050896.1 · 128,694–128,796 bp · −
rrn23 · NC_050896.1 · 128,897–131,705 bp · −
trnA-UGC · NC_050896.1 · 131,871–132,747 bp · −
trnI-GAU · NC_050896.1 · 132,812–133,823 bp · −
rrn16 · NC_050896.1 · 134,122–135,612 bp · −
trnV-GAC · NC_050896.1 · 135,839–135,910 bp · −
ycf15 · NC_050896.1 · 142,230–142,478 bp · −
ycf2 · NC_050896.1 · 142,569–149,402 bp · −
psbK · NC_050896.1 · 7,372–7,560 bp · +
psbI · NC_050896.1 · 7,965–8,075 bp · +
trnG-UCC · NC_050896.1 · 9,627–9,760 bp · +
trnR-UCU · NC_050896.1 · 9,942–10,013 bp · +
trnC-GCA · NC_050896.1 · 27,912–27,982 bp · +
petN · NC_050896.1 · 28,145–28,234 bp · +
trnT-GGU · NC_050896.1 · 30,786–30,857 bp · +
psbD · NC_050896.1 · 32,237–33,298 bp · +
psbC · NC_050896.1 · 33,246–34,667 bp · +
psbZ · NC_050896.1 · 35,340–35,528 bp · +
trnG-GCC · NC_050896.1 · 35,800–35,870 bp · +
trnS-GGA · NC_050896.1 · 44,726–44,812 bp · +
trnL-UAA · NC_050896.1 · 46,812–47,351 bp · +
trnF-GAA · NC_050896.1 · 47,650–47,722 bp · +
trnM-CAU · NC_050896.1 · 51,747–51,819 bp · +
rbcL · NC_050896.1 · 54,673–56,127 bp · +
accD · NC_050896.1 · 56,830–58,317 bp · +
psaI · NC_050896.1 · 58,796–58,906 bp · +
ycf4 · NC_050896.1 · 59,358–59,912 bp · +
cemA · NC_050896.1 · 60,460–61,149 bp · +
petA · NC_050896.1 · 61,355–62,317 bp · +
petL · NC_050896.1 · 64,966–65,061 bp · +
petG · NC_050896.1 · 65,247–65,360 bp · +
psaJ · NC_050896.1 · 66,044–66,217 bp · +
rpl33 · NC_050896.1 · 66,670–66,870 bp · +
rps18 · NC_050896.1 · 67,036–67,341 bp · +
rps12 · NC_050896.1 · 137,543–138,326 bp · +
psbB · NC_050896.1 · 71,374–72,900 bp · +
psbT · NC_050896.1 · 73,080–73,187 bp · +
psbH · NC_050896.1 · 73,485–73,706 bp · +
petB · NC_050896.1 · 73,832–75,184 bp · +
petD · NC_050896.1 · 75,378–76,574 bp · +
ycf2 · NC_050896.1 · 85,067–91,900 bp · +
ycf15 · NC_050896.1 · 91,991–92,239 bp · +
trnV-GAC · NC_050896.1 · 98,559–98,630 bp · +
rrn16 · NC_050896.1 · 98,857–100,347 bp · +
trnI-GAU · NC_050896.1 · 100,646–101,657 bp · +
trnA-UGC · NC_050896.1 · 101,722–102,598 bp · +
rrn23 · NC_050896.1 · 102,764–105,572 bp · +
rrn4.5 · NC_050896.1 · 105,673–105,775 bp · +
rrn5 · NC_050896.1 · 106,031–106,151 bp · +
trnR-ACG · NC_050896.1 · 106,395–106,468 bp · +
rpl32 · NC_050896.1 · 111,072–111,242 bp · +
trnL-UAG · NC_050896.1 · 111,946–112,025 bp · +
ccsA · NC_050896.1 · 112,070–113,095 bp · +
trnN-GUU · NC_050896.1 · 127,410–127,481 bp · +
rps7 · NC_050896.1 · 138,380–138,847 bp · +
ndhB · NC_050896.1 · 139,176–141,329 bp · +
trnL-CAA · NC_050896.1 · 141,889–141,969 bp · +
trnI-CAU · NC_050896.1 · 149,491–149,564 bp · +
rpl23 · NC_050896.1 · 149,730–150,011 bp · +
rpl2 · NC_050896.1 · 150,030–151,512 bp · +
rps19 · NC_050896.1 · 151,572–151,614 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Salvia meiliensis
ANNOTATED PLASTOME
NC_050896.1
151,614 bp · 133 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37904 75807 113710 151614 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2 rps19
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-CCG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
134 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 11 84 74 Locate
psbA gene − 392 1450 1059 Locate
trnK-UUU gene − 1673 4265 2593 Locate
matK gene − 1998 3527 1530 Locate
rps16 gene − 4837 5941 1105 Locate
trnQ-UUG gene − 6916 6987 72 Locate
psbK gene + 7372 7560 189 Locate
psbI gene + 7965 8075 111 Locate
trnS-GCU gene − 8229 8316 88 Locate
trnG-UCC gene + 9627 9760 134 Locate
trnR-UCU gene + 9942 10013 72 Locate
atpA gene − 10125 11648 1524 Locate
atpF gene − 11749 12994 1246 Locate
atpH gene − 13268 13513 246 Locate
atpI gene − 14484 15227 744 Locate
rps2 gene − 15454 16164 711 Locate
rpoC2 gene − 16373 20560 4188 Locate
rpoC1 gene − 20718 23531 2814 Locate
rpoB gene − 23558 26770 3213 Locate
trnC-GCA gene + 27912 27982 71 Locate
petN gene + 28145 28234 90 Locate
psbM gene − 29211 29315 105 Locate
trnD-GUC gene − 29836 29909 74 Locate
trnY-GUA gene − 30020 30103 84 Locate
trnE-UUC gene − 30175 30247 73 Locate
trnT-GGU gene + 30786 30857 72 Locate
psbD gene + 32237 33298 1062 Locate
psbC gene + 33246 34667 1422 Locate
trnS-UGA gene − 34913 35005 93 Locate
psbZ gene + 35340 35528 189 Locate
trnG-GCC gene + 35800 35870 71 Locate
trnfM-CAU gene − 36051 36124 74 Locate
rps14 gene − 36269 36571 303 Locate
psaB gene − 36694 38898 2205 Locate
psaA gene − 38924 41176 2253 Locate
ycf3 gene − 41966 43910 1945 Locate
trnS-GGA gene + 44726 44812 87 Locate
rps4 gene − 45089 45694 606 Locate
trnT-UGU gene − 46064 46136 73 Locate
trnL-UAA gene + 46812 47351 540 Locate
trnF-GAA gene + 47650 47722 73 Locate
ndhJ gene − 48255 48731 477 Locate
ndhK gene − 48842 49519 678 Locate
ndhC gene − 49571 49933 363 Locate
trnV-UAC gene − 50905 51558 654 Locate
trnM-CAU gene + 51747 51819 73 Locate
atpE gene − 52015 52416 402 Locate
atpB gene − 52413 53909 1497 Locate
rbcL gene + 54673 56127 1455 Locate
accD gene + 56830 58317 1488 Locate
psaI gene + 58796 58906 111 Locate
ycf4 gene + 59358 59912 555 Locate
cemA gene + 60460 61149 690 Locate
petA gene + 61355 62317 963 Locate
psbJ gene − 63376 63498 123 Locate
psbL gene − 63628 63744 117 Locate
psbF gene − 63768 63887 120 Locate
psbE gene − 63902 64153 252 Locate
petL gene + 64966 65061 96 Locate
petG gene + 65247 65360 114 Locate
trnW-CCA gene − 65475 65548 74 Locate
trnP-UGG gene − 65719 65792 74 Locate
psaJ gene + 66044 66217 174 Locate
rpl33 gene + 66670 66870 201 Locate
rps18 gene + 67036 67341 306 Locate
rpl20 gene − 67575 67961 387 Locate
rps12 gene − 68775 68888 114 Locate
clpP gene − 69012 70924 1913 Locate
psbB gene + 71374 72900 1527 Locate
psbT gene + 73080 73187 108 Locate
psbN gene − 73248 73379 132 Locate
psbH gene + 73485 73706 222 Locate
petB gene + 73832 75184 1353 Locate
petD gene + 75378 76574 1197 Locate
rpoA gene − 76751 77758 1008 Locate
rps11 gene − 77831 78247 417 Locate
rpl36 gene − 78357 78470 114 Locate
infA gene − 78566 78799 234 Locate
rps8 gene − 78926 79330 405 Locate
rpl14 gene − 79518 79886 369 Locate
rpl16 gene − 80018 81299 1282 Locate
rps3 gene − 81435 82097 663 Locate
rpl22 gene − 82082 82549 468 Locate
rps19 gene − 82619 82897 279 Locate
rpl2 gene − 82957 84439 1483 Locate
rpl23 gene − 84458 84739 282 Locate
trnI-CAU gene − 84905 84978 74 Locate
ycf2 gene + 85067 91900 6834 Locate
ycf15 gene + 91991 92239 249 Locate
trnL-CAA gene − 92500 92580 81 Locate
ndhB gene − 93140 95293 2154 Locate
rps7 gene − 95622 96089 468 Locate
rps12 gene − 96143 96926 784 Locate
trnV-GAC gene + 98559 98630 72 Locate
rrn16 gene + 98857 100347 1491 Locate
trnI-GAU gene + 100646 101657 1012 Locate
trnA-UGC gene + 101722 102598 877 Locate
rrn23 gene + 102764 105572 2809 Locate
rrn4.5 gene + 105673 105775 103 Locate
rrn5 gene + 106031 106151 121 Locate
trnR-ACG gene + 106395 106468 74 Locate
trnN-GUU gene − 106988 107059 72 Locate
ndhF gene − 108413 110629 2217 Locate
rpl32 gene + 111072 111242 171 Locate
trnL-UAG gene + 111946 112025 80 Locate
ccsA gene + 112070 113095 1026 Locate
ndhD gene − 113325 114866 1542 Locate
psaC gene − 114988 115233 246 Locate
ndhE gene − 115484 115789 306 Locate
ndhG gene − 116010 116540 531 Locate
ndhI gene − 116911 117417 507 Locate
ndhA gene − 117498 119574 2077 Locate
ndhH gene − 119576 120811 1236 Locate
rps15 gene − 120857 121129 273 Locate
ycf1 gene − 121555 127191 5637 Locate
trnN-GUU gene + 127410 127481 72 Locate
trnR-CCG gene − 128001 128074 74 Locate
rrn5 gene − 128318 128438 121 Locate
rrn4.5 gene − 128694 128796 103 Locate
rrn23 gene − 128897 131705 2809 Locate
trnA-UGC gene − 131871 132747 877 Locate
trnI-GAU gene − 132812 133823 1012 Locate
rrn16 gene − 134122 135612 1491 Locate
trnV-GAC gene − 135839 135910 72 Locate
rps12 gene + 137543 138326 784 Locate
rps7 gene + 138380 138847 468 Locate
ndhB gene + 139176 141329 2154 Locate
trnL-CAA gene + 141889 141969 81 Locate
ycf15 gene − 142230 142478 249 Locate
ycf2 gene − 142569 149402 6834 Locate
trnI-CAU gene + 149491 149564 74 Locate
rpl23 gene + 149730 150011 282 Locate
rpl2 gene + 150030 151512 1483 Locate
rps19 gene + 151572 151614 43 Locate
Status Available
Accession NC_050896.1
Length 151,614 bp
GC content 38.0%
Annotated genes 133
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 14 Ribosomal Protein 27 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources