Salvia merjamie chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
LSC
IR
SSC
IR
trnH-GUG · NC_050897.1 · 11–84 bp · −
psbA · NC_050897.1 · 390–1,448 bp · −
trnK-UUU · NC_050897.1 · 1,680–4,269 bp · −
matK · NC_050897.1 · 2,000–3,529 bp · −
rps16 · NC_050897.1 · 4,843–5,946 bp · −
trnQ-UUG · NC_050897.1 · 6,491–6,562 bp · −
trnS-GCU · NC_050897.1 · 7,791–7,878 bp · −
atpA · NC_050897.1 · 9,706–11,229 bp · −
atpF · NC_050897.1 · 11,332–12,590 bp · −
atpH · NC_050897.1 · 12,862–13,107 bp · −
atpI · NC_050897.1 · 14,028–14,771 bp · −
rps2 · NC_050897.1 · 14,996–15,706 bp · −
rpoC2 · NC_050897.1 · 15,921–20,108 bp · −
rpoC1 · NC_050897.1 · 20,253–23,070 bp · −
rpoB · NC_050897.1 · 23,097–26,309 bp · −
psbM · NC_050897.1 · 28,787–28,891 bp · −
trnD-GUC · NC_050897.1 · 29,402–29,475 bp · −
trnY-GUA · NC_050897.1 · 29,586–29,669 bp · −
trnE-UUC · NC_050897.1 · 29,740–29,812 bp · −
trnS-UGA · NC_050897.1 · 34,462–34,554 bp · −
trnfM-CAU · NC_050897.1 · 35,594–35,667 bp · −
rps14 · NC_050897.1 · 35,812–36,114 bp · −
psaB · NC_050897.1 · 36,236–38,440 bp · −
psaA · NC_050897.1 · 38,466–40,718 bp · −
ycf3 · NC_050897.1 · 41,511–43,468 bp · −
rps4 · NC_050897.1 · 44,663–45,268 bp · −
trnT-UGU · NC_050897.1 · 45,620–45,692 bp · −
ndhJ · NC_050897.1 · 47,964–48,458 bp · −
ndhK · NC_050897.1 · 48,557–49,234 bp · −
ndhC · NC_050897.1 · 49,286–49,648 bp · −
trnV-UAC · NC_050897.1 · 50,616–51,264 bp · −
atpE · NC_050897.1 · 51,728–52,129 bp · −
atpB · NC_050897.1 · 52,126–53,622 bp · −
psbJ · NC_050897.1 · 63,097–63,219 bp · −
psbL · NC_050897.1 · 63,349–63,465 bp · −
psbF · NC_050897.1 · 63,489–63,608 bp · −
psbE · NC_050897.1 · 63,623–63,874 bp · −
trnW-CCA · NC_050897.1 · 65,267–65,340 bp · −
trnP-UGG · NC_050897.1 · 65,515–65,588 bp · −
rpl20 · NC_050897.1 · 67,351–67,737 bp · −
rps12 · NC_050897.1 · 68,537–68,650 bp · −
rps12 · NC_050897.1 · 95,846–96,639 bp · −
clpP · NC_050897.1 · 68,773–70,663 bp · −
psbN · NC_050897.1 · 72,988–73,119 bp · −
rpoA · NC_050897.1 · 76,498–77,505 bp · −
rps11 · NC_050897.1 · 77,576–77,992 bp · −
rpl36 · NC_050897.1 · 78,102–78,215 bp · −
infA · NC_050897.1 · 78,311–78,544 bp · −
rps8 · NC_050897.1 · 78,665–79,069 bp · −
rpl14 · NC_050897.1 · 79,240–79,608 bp · −
rpl16 · NC_050897.1 · 79,738–81,010 bp · −
rps3 · NC_050897.1 · 81,153–81,815 bp · −
rpl22 · NC_050897.1 · 81,800–82,267 bp · −
rps19 · NC_050897.1 · 82,331–82,609 bp · −
rpl2 · NC_050897.1 · 82,669–84,163 bp · −
rpl23 · NC_050897.1 · 84,182–84,463 bp · −
trnI-CAU · NC_050897.1 · 84,629–84,702 bp · −
trnL-CAA · NC_050897.1 · 92,211–92,291 bp · −
ndhB · NC_050897.1 · 92,843–95,050 bp · −
rps7 · NC_050897.1 · 95,325–95,792 bp · −
trnN-GUU · NC_050897.1 · 106,679–106,750 bp · −
ndhF · NC_050897.1 · 108,098–110,329 bp · −
ndhD · NC_050897.1 · 113,047–114,588 bp · −
psaC · NC_050897.1 · 114,682–114,927 bp · −
ndhE · NC_050897.1 · 115,178–115,483 bp · −
ndhG · NC_050897.1 · 115,702–116,232 bp · −
ndhI · NC_050897.1 · 116,606–117,112 bp · −
ndhA · NC_050897.1 · 117,193–119,289 bp · −
ndhH · NC_050897.1 · 119,291–120,526 bp · −
rps15 · NC_050897.1 · 120,572–120,844 bp · −
ycf1 · NC_050897.1 · 121,248–126,884 bp · −
trnR-ACG · NC_050897.1 · 127,693–127,766 bp · −
rrn5 · NC_050897.1 · 128,010–128,130 bp · −
rrn4.5 · NC_050897.1 · 128,380–128,482 bp · −
rrn23 · NC_050897.1 · 128,583–131,393 bp · −
trnA-UGC · NC_050897.1 · 131,554–132,431 bp · −
trnI-GAU · NC_050897.1 · 132,496–133,515 bp · −
rrn16 · NC_050897.1 · 133,814–135,304 bp · −
trnV-GAC · NC_050897.1 · 135,531–135,602 bp · −
ycf15 · NC_050897.1 · 141,898–142,146 bp · −
ycf2 · NC_050897.1 · 142,229–149,062 bp · −
psbK · NC_050897.1 · 6,940–7,128 bp · +
psbI · NC_050897.1 · 7,540–7,650 bp · +
trnG-UCC · NC_050897.1 · 8,595–9,348 bp · +
trnR-UCU · NC_050897.1 · 9,529–9,600 bp · +
trnC-GCA · NC_050897.1 · 27,461–27,531 bp · +
petN · NC_050897.1 · 27,695–27,784 bp · +
trnT-GGU · NC_050897.1 · 30,371–30,442 bp · +
psbD · NC_050897.1 · 31,785–32,846 bp · +
psbC · NC_050897.1 · 32,794–34,215 bp · +
psbZ · NC_050897.1 · 34,884–35,072 bp · +
trnG-GCC · NC_050897.1 · 35,348–35,418 bp · +
trnS-GGA · NC_050897.1 · 44,309–44,395 bp · +
trnL-UAA · NC_050897.1 · 46,384–46,961 bp · +
trnF-GAA · NC_050897.1 · 47,245–47,317 bp · +
trnM-CAU · NC_050897.1 · 51,445–51,517 bp · +
rbcL · NC_050897.1 · 54,400–55,854 bp · +
accD · NC_050897.1 · 56,548–58,020 bp · +
psaI · NC_050897.1 · 58,489–58,599 bp · +
ycf4 · NC_050897.1 · 59,046–59,600 bp · +
cemA · NC_050897.1 · 60,238–60,927 bp · +
petA · NC_050897.1 · 61,136–62,098 bp · +
petL · NC_050897.1 · 64,763–64,858 bp · +
petG · NC_050897.1 · 65,038–65,151 bp · +
psaJ · NC_050897.1 · 65,859–65,993 bp · +
rpl33 · NC_050897.1 · 66,440–66,640 bp · +
rps18 · NC_050897.1 · 66,811–67,116 bp · +
rps12 · NC_050897.1 · 137,214–138,007 bp · +
psbB · NC_050897.1 · 71,117–72,643 bp · +
psbT · NC_050897.1 · 72,826–72,927 bp · +
psbH · NC_050897.1 · 73,225–73,446 bp · +
petB · NC_050897.1 · 73,572–74,943 bp · +
petD · NC_050897.1 · 75,131–76,321 bp · +
ycf2 · NC_050897.1 · 84,791–91,624 bp · +
ycf15 · NC_050897.1 · 91,707–91,955 bp · +
trnV-GAC · NC_050897.1 · 98,251–98,322 bp · +
rrn16 · NC_050897.1 · 98,549–100,039 bp · +
trnI-GAU · NC_050897.1 · 100,338–101,357 bp · +
trnA-UGC · NC_050897.1 · 101,422–102,299 bp · +
rrn23 · NC_050897.1 · 102,460–105,270 bp · +
rrn4.5 · NC_050897.1 · 105,371–105,473 bp · +
rrn5 · NC_050897.1 · 105,723–105,843 bp · +
trnR-ACG · NC_050897.1 · 106,087–106,160 bp · +
ycf1 · NC_050897.1 · 107,080–108,231 bp · +
rpl32 · NC_050897.1 · 110,642–110,950 bp · +
trnL-UAG · NC_050897.1 · 111,670–111,749 bp · +
ccsA · NC_050897.1 · 111,847–112,818 bp · +
trnN-GUU · NC_050897.1 · 127,103–127,174 bp · +
rps7 · NC_050897.1 · 138,061–138,528 bp · +
ndhB · NC_050897.1 · 138,803–141,010 bp · +
trnL-CAA · NC_050897.1 · 141,562–141,642 bp · +
trnI-CAU · NC_050897.1 · 149,151–149,224 bp · +
rpl23 · NC_050897.1 · 149,390–149,671 bp · +
rpl2 · NC_050897.1 · 149,690–151,184 bp · +
rps19 · NC_050897.1 · 151,244–151,286 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Salvia merjamie
ANNOTATED PLASTOME
NC_050897.1
151,286 bp · 134 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37822 75643 113464 151286 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG ycf1 rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2 rps19
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
135 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 11 84 74 Locate
psbA gene − 390 1448 1059 Locate
trnK-UUU gene − 1680 4269 2590 Locate
matK gene − 2000 3529 1530 Locate
rps16 gene − 4843 5946 1104 Locate
trnQ-UUG gene − 6491 6562 72 Locate
psbK gene + 6940 7128 189 Locate
psbI gene + 7540 7650 111 Locate
trnS-GCU gene − 7791 7878 88 Locate
trnG-UCC gene + 8595 9348 754 Locate
trnR-UCU gene + 9529 9600 72 Locate
atpA gene − 9706 11229 1524 Locate
atpF gene − 11332 12590 1259 Locate
atpH gene − 12862 13107 246 Locate
atpI gene − 14028 14771 744 Locate
rps2 gene − 14996 15706 711 Locate
rpoC2 gene − 15921 20108 4188 Locate
rpoC1 gene − 20253 23070 2818 Locate
rpoB gene − 23097 26309 3213 Locate
trnC-GCA gene + 27461 27531 71 Locate
petN gene + 27695 27784 90 Locate
psbM gene − 28787 28891 105 Locate
trnD-GUC gene − 29402 29475 74 Locate
trnY-GUA gene − 29586 29669 84 Locate
trnE-UUC gene − 29740 29812 73 Locate
trnT-GGU gene + 30371 30442 72 Locate
psbD gene + 31785 32846 1062 Locate
psbC gene + 32794 34215 1422 Locate
trnS-UGA gene − 34462 34554 93 Locate
psbZ gene + 34884 35072 189 Locate
trnG-GCC gene + 35348 35418 71 Locate
trnfM-CAU gene − 35594 35667 74 Locate
rps14 gene − 35812 36114 303 Locate
psaB gene − 36236 38440 2205 Locate
psaA gene − 38466 40718 2253 Locate
ycf3 gene − 41511 43468 1958 Locate
trnS-GGA gene + 44309 44395 87 Locate
rps4 gene − 44663 45268 606 Locate
trnT-UGU gene − 45620 45692 73 Locate
trnL-UAA gene + 46384 46961 578 Locate
trnF-GAA gene + 47245 47317 73 Locate
ndhJ gene − 47964 48458 495 Locate
ndhK gene − 48557 49234 678 Locate
ndhC gene − 49286 49648 363 Locate
trnV-UAC gene − 50616 51264 649 Locate
trnM-CAU gene + 51445 51517 73 Locate
atpE gene − 51728 52129 402 Locate
atpB gene − 52126 53622 1497 Locate
rbcL gene + 54400 55854 1455 Locate
accD gene + 56548 58020 1473 Locate
psaI gene + 58489 58599 111 Locate
ycf4 gene + 59046 59600 555 Locate
cemA gene + 60238 60927 690 Locate
petA gene + 61136 62098 963 Locate
psbJ gene − 63097 63219 123 Locate
psbL gene − 63349 63465 117 Locate
psbF gene − 63489 63608 120 Locate
psbE gene − 63623 63874 252 Locate
petL gene + 64763 64858 96 Locate
petG gene + 65038 65151 114 Locate
trnW-CCA gene − 65267 65340 74 Locate
trnP-UGG gene − 65515 65588 74 Locate
psaJ gene + 65859 65993 135 Locate
rpl33 gene + 66440 66640 201 Locate
rps18 gene + 66811 67116 306 Locate
rpl20 gene − 67351 67737 387 Locate
rps12 gene − 68537 68650 114 Locate
clpP gene − 68773 70663 1891 Locate
psbB gene + 71117 72643 1527 Locate
psbT gene + 72826 72927 102 Locate
psbN gene − 72988 73119 132 Locate
psbH gene + 73225 73446 222 Locate
petB gene + 73572 74943 1372 Locate
petD gene + 75131 76321 1191 Locate
rpoA gene − 76498 77505 1008 Locate
rps11 gene − 77576 77992 417 Locate
rpl36 gene − 78102 78215 114 Locate
infA gene − 78311 78544 234 Locate
rps8 gene − 78665 79069 405 Locate
rpl14 gene − 79240 79608 369 Locate
rpl16 gene − 79738 81010 1273 Locate
rps3 gene − 81153 81815 663 Locate
rpl22 gene − 81800 82267 468 Locate
rps19 gene − 82331 82609 279 Locate
rpl2 gene − 82669 84163 1495 Locate
rpl23 gene − 84182 84463 282 Locate
trnI-CAU gene − 84629 84702 74 Locate
ycf2 gene + 84791 91624 6834 Locate
ycf15 gene + 91707 91955 249 Locate
trnL-CAA gene − 92211 92291 81 Locate
ndhB gene − 92843 95050 2208 Locate
rps7 gene − 95325 95792 468 Locate
rps12 gene − 95846 96639 794 Locate
trnV-GAC gene + 98251 98322 72 Locate
rrn16 gene + 98549 100039 1491 Locate
trnI-GAU gene + 100338 101357 1020 Locate
trnA-UGC gene + 101422 102299 878 Locate
rrn23 gene + 102460 105270 2811 Locate
rrn4.5 gene + 105371 105473 103 Locate
rrn5 gene + 105723 105843 121 Locate
trnR-ACG gene + 106087 106160 74 Locate
trnN-GUU gene − 106679 106750 72 Locate
ycf1 gene + 107080 108231 1152 Locate
ndhF gene − 108098 110329 2232 Locate
rpl32 gene + 110642 110950 309 Locate
trnL-UAG gene + 111670 111749 80 Locate
ccsA gene + 111847 112818 972 Locate
ndhD gene − 113047 114588 1542 Locate
psaC gene − 114682 114927 246 Locate
ndhE gene − 115178 115483 306 Locate
ndhG gene − 115702 116232 531 Locate
ndhI gene − 116606 117112 507 Locate
ndhA gene − 117193 119289 2097 Locate
ndhH gene − 119291 120526 1236 Locate
rps15 gene − 120572 120844 273 Locate
ycf1 gene − 121248 126884 5637 Locate
trnN-GUU gene + 127103 127174 72 Locate
trnR-ACG gene − 127693 127766 74 Locate
rrn5 gene − 128010 128130 121 Locate
rrn4.5 gene − 128380 128482 103 Locate
rrn23 gene − 128583 131393 2811 Locate
trnA-UGC gene − 131554 132431 878 Locate
trnI-GAU gene − 132496 133515 1020 Locate
rrn16 gene − 133814 135304 1491 Locate
trnV-GAC gene − 135531 135602 72 Locate
rps12 gene + 137214 138007 794 Locate
rps7 gene + 138061 138528 468 Locate
ndhB gene + 138803 141010 2208 Locate
trnL-CAA gene + 141562 141642 81 Locate
ycf15 gene − 141898 142146 249 Locate
ycf2 gene − 142229 149062 6834 Locate
trnI-CAU gene + 149151 149224 74 Locate
rpl23 gene + 149390 149671 282 Locate
rpl2 gene + 149690 151184 1495 Locate
rps19 gene + 151244 151286 43 Locate
Status Available
Accession NC_050897.1
Length 151,286 bp
GC content 37.9%
Annotated genes 134
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 15 Ribosomal Protein 27 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources