Salvia miltiorrhiza f. alba chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
trnH-GUG · MT012420.1 · 11–84 bp · −
psbA · MT012420.1 · 392–1,450 bp · −
trnK-UUU · MT012420.1 · 1,673–4,266 bp · −
matK · MT012420.1 · 1,972–3,534 bp · −
rps16 · MT012420.1 · 4,835–5,945 bp · −
trnS-GCU · MT012420.1 · 8,229–8,316 bp · −
atpA · MT012420.1 · 10,127–11,650 bp · −
atpF · MT012420.1 · 11,746–12,992 bp · −
atpH · MT012420.1 · 13,265–13,510 bp · −
atpI · MT012420.1 · 14,481–15,224 bp · −
rps2 · MT012420.1 · 15,452–16,162 bp · −
rpoC2 · MT012420.1 · 16,371–20,558 bp · −
rpoC1 · MT012420.1 · 20,716–23,550 bp · −
rpoB · MT012420.1 · 23,556–26,768 bp · −
psbM · MT012420.1 · 29,212–29,316 bp · −
trnS-UGA · MT012420.1 · 34,914–35,006 bp · −
trnfM-CAU · MT012420.1 · 36,051–36,124 bp · −
rps14 · MT012420.1 · 36,269–36,571 bp · −
psaB · MT012420.1 · 36,694–38,898 bp · −
psaA · MT012420.1 · 38,924–41,176 bp · −
ycf3 · MT012420.1 · 41,967–43,898 bp · −
rps4 · MT012420.1 · 45,078–45,683 bp · −
trnT-UGU · MT012420.1 · 46,055–46,127 bp · −
ndhJ · MT012420.1 · 48,246–48,722 bp · −
ndhK · MT012420.1 · 48,833–49,510 bp · −
ndhC · MT012420.1 · 49,562–49,924 bp · −
trnV-UAC · MT012420.1 · 50,874–51,522 bp · −
atpE · MT012420.1 · 51,979–52,380 bp · −
atpB · MT012420.1 · 52,377–53,873 bp · −
psbJ · MT012420.1 · 63,319–63,441 bp · −
psbL · MT012420.1 · 63,571–63,687 bp · −
psbF · MT012420.1 · 63,711–63,830 bp · −
psbE · MT012420.1 · 63,845–64,096 bp · −
trnW-CCA · MT012420.1 · 65,405–65,478 bp · −
trnP-UGG · MT012420.1 · 65,649–65,722 bp · −
rpl20 · MT012420.1 · 67,497–67,883 bp · −
rps12 · MT012420.1 · 68,695–68,808 bp · −
rps12 · MT012420.1 · 96,613–96,847 bp · −
rps12 · MT012420.1 · 96,064–96,086 bp · −
rps12 · MT012420.1 · 96,064–96,848 bp · −
clpP · MT012420.1 · 68,932–70,843 bp · −
psbN · MT012420.1 · 73,165–73,296 bp · −
rpoA · MT012420.1 · 76,672–77,679 bp · −
rps11 · MT012420.1 · 77,751–78,167 bp · −
rpl36 · MT012420.1 · 78,277–78,390 bp · −
infA · MT012420.1 · 78,486–78,719 bp · −
rps8 · MT012420.1 · 78,846–79,250 bp · −
rpl14 · MT012420.1 · 79,440–79,808 bp · −
rpl16 · MT012420.1 · 79,940–81,220 bp · −
rps3 · MT012420.1 · 81,356–82,018 bp · −
rpl22 · MT012420.1 · 82,003–82,470 bp · −
rps19 · MT012420.1 · 82,540–82,818 bp · −
rpl2 · MT012420.1 · 82,878–84,360 bp · −
rpl23 · MT012420.1 · 84,379–84,660 bp · −
trnI-CAU · MT012420.1 · 84,826–84,899 bp · −
ndhB · MT012420.1 · 93,061–95,268 bp · −
rps7 · MT012420.1 · 95,543–96,010 bp · −
trnN-GUU · MT012420.1 · 106,840–106,911 bp · −
ndhF · MT012420.1 · 108,265–110,481 bp · −
ndhD · MT012420.1 · 113,189–114,730 bp · −
psaC · MT012420.1 · 114,840–115,085 bp · −
ndhE · MT012420.1 · 115,336–115,641 bp · −
ndhG · MT012420.1 · 115,857–116,387 bp · −
ndhI · MT012420.1 · 116,764–117,270 bp · −
ndhA · MT012420.1 · 117,351–119,427 bp · −
ndhH · MT012420.1 · 119,429–120,610 bp · −
rps15 · MT012420.1 · 120,710–120,982 bp · −
ycf1 · MT012420.1 · 121,408–126,924 bp · −
trnR-ACG · MT012420.1 · 127,846–127,918 bp · −
rrn5 · MT012420.1 · 128,162–128,282 bp · −
rrn4.5 · MT012420.1 · 128,507–128,609 bp · −
rrn23 · MT012420.1 · 128,708–131,518 bp · −
trnA-UGC · MT012420.1 · 131,684–132,551 bp · −
trnI-GAU · MT012420.1 · 132,616–133,627 bp · −
rrn16 · MT012420.1 · 133,926–135,416 bp · −
trnV-GAC · MT012420.1 · 135,643–135,714 bp · −
ycf15 · MT012420.1 · 142,005–142,253 bp · −
ycf2 · MT012420.1 · 142,344–149,177 bp · −
trnQ-UUG · MT012420.1 · 6,914–6,985 bp · +
psbK · MT012420.1 · 7,378–7,557 bp · +
psbI · MT012420.1 · 7,954–8,064 bp · +
trnG-UCC · MT012420.1 · 9,007–9,759 bp · +
trnR-UCU · MT012420.1 · 9,944–10,015 bp · +
trnC-GCA · MT012420.1 · 27,913–27,983 bp · +
petN · MT012420.1 · 28,146–28,235 bp · +
trnD-GUC · MT012420.1 · 29,837–29,910 bp · +
trnY-GUA · MT012420.1 · 30,021–30,104 bp · +
trnE-UUC · MT012420.1 · 30,176–30,245 bp · +
trnT-GGU · MT012420.1 · 30,787–30,858 bp · +
psbD · MT012420.1 · 32,238–33,299 bp · +
psbC · MT012420.1 · 33,247–34,668 bp · +
psbZ · MT012420.1 · 35,341–35,529 bp · +
trnG-GCC · MT012420.1 · 35,801–35,871 bp · +
trnS-GGA · MT012420.1 · 44,715–44,801 bp · +
trnL-UAA · MT012420.1 · 46,803–47,342 bp · +
trnF-GAA · MT012420.1 · 47,641–47,713 bp · +
trnM-CAU · MT012420.1 · 51,711–51,783 bp · +
rbcL · MT012420.1 · 54,658–56,091 bp · +
accD · MT012420.1 · 56,782–58,269 bp · +
psaI · MT012420.1 · 58,732–58,842 bp · +
ycf4 · MT012420.1 · 59,297–59,851 bp · +
cemA · MT012420.1 · 60,399–61,088 bp · +
petA · MT012420.1 · 61,294–62,256 bp · +
petL · MT012420.1 · 64,903–64,998 bp · +
petG · MT012420.1 · 65,177–65,290 bp · +
psaJ · MT012420.1 · 66,013–66,147 bp · +
rpl33 · MT012420.1 · 66,599–66,799 bp · +
rps18 · MT012420.1 · 66,960–67,265 bp · +
rps12 · MT012420.1 · 137,315–138,101 bp · +
psbB · MT012420.1 · 71,292–72,818 bp · +
psbT · MT012420.1 · 72,997–73,104 bp · +
psbH · MT012420.1 · 73,402–73,623 bp · +
petB · MT012420.1 · 73,749–73,754 bp · +
petB · MT012420.1 · 74,458–75,099 bp · +
petB · MT012420.1 · 73,749–75,102 bp · +
petD · MT012420.1 · 75,287–76,495 bp · +
petD · MT012420.1 · 75,293–75,298 bp · +
petD · MT012420.1 · 76,019–76,495 bp · +
ycf2 · MT012420.1 · 84,988–91,821 bp · +
ycf15 · MT012420.1 · 91,912–92,160 bp · +
trnL-CAA · MT012420.1 · 92,421–92,501 bp · +
trnV-GAC · MT012420.1 · 98,451–98,522 bp · +
rrn16 · MT012420.1 · 98,749–100,239 bp · +
trnI-GAU · MT012420.1 · 100,538–101,549 bp · +
trnA-UGC · MT012420.1 · 101,614–102,481 bp · +
rrn23 · MT012420.1 · 102,647–105,457 bp · +
rrn4.5 · MT012420.1 · 105,556–105,658 bp · +
rrn5 · MT012420.1 · 105,883–106,013 bp · +
trnR-ACG · MT012420.1 · 106,247–106,320 bp · +
rpl32 · MT012420.1 · 110,933–111,103 bp · +
trnL-UAG · MT012420.1 · 111,808–111,887 bp · +
ccsA · MT012420.1 · 111,980–112,957 bp · +
trnN-GUU · MT012420.1 · 127,254–127,325 bp · +
rps7 · MT012420.1 · 138,155–138,622 bp · +
ndhB · MT012420.1 · 138,897–141,104 bp · +
trnL-CAA · MT012420.1 · 141,664–141,744 bp · +
trnI-CAU · MT012420.1 · 149,266–149,339 bp · +
rpl23 · MT012420.1 · 149,505–149,786 bp · +
rpl2 · MT012420.1 · 149,805–151,287 bp · +
rps19 · MT012420.1 · 151,347–151,389 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Salvia miltiorrhiza f. alba
ANNOTATED PLASTOME
MT012420.1
151,389 bp · 136 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37847 75694 113542 151389 bp
Forward strand 5′ → 3′
trnQ-UUG psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnD-GUC trnY-GUA trnE-UUC trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petB petB petD petD petD ycf2 ycf15 trnL-CAA trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2 rps19
trnH-GUG psbA trnK-UUU matK rps16 trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU ndhB rps7 rps12 rps12 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
140 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 11 84 74 Locate
psbA gene − 392 1450 1059 Locate
trnK-UUU gene − 1673 4266 2594 Locate
matK gene − 1972 3534 1563 Locate
rps16 gene − 4835 5945 1111 Locate
trnQ-UUG gene + 6914 6985 72 Locate
psbK gene + 7378 7557 180 Locate
psbI gene + 7954 8064 111 Locate
trnS-GCU gene − 8229 8316 88 Locate
trnG-UCC gene + 9007 9759 753 Locate
trnR-UCU gene + 9944 10015 72 Locate
atpA gene − 10127 11650 1524 Locate
atpF gene − 11746 12992 1247 Locate
atpH gene − 13265 13510 246 Locate
atpI gene − 14481 15224 744 Locate
rps2 gene − 15452 16162 711 Locate
rpoC2 gene − 16371 20558 4188 Locate
rpoC1 gene − 20716 23550 2835 Locate
rpoB gene − 23556 26768 3213 Locate
trnC-GCA gene + 27913 27983 71 Locate
petN gene + 28146 28235 90 Locate
psbM gene − 29212 29316 105 Locate
trnD-GUC gene + 29837 29910 74 Locate
trnY-GUA gene + 30021 30104 84 Locate
trnE-UUC gene + 30176 30245 70 Locate
trnT-GGU gene + 30787 30858 72 Locate
psbD gene + 32238 33299 1062 Locate
psbC gene + 33247 34668 1422 Locate
trnS-UGA gene − 34914 35006 93 Locate
psbZ gene + 35341 35529 189 Locate
trnG-GCC gene + 35801 35871 71 Locate
trnfM-CAU gene − 36051 36124 74 Locate
rps14 gene − 36269 36571 303 Locate
psaB gene − 36694 38898 2205 Locate
psaA gene − 38924 41176 2253 Locate
ycf3 gene − 41967 43898 1932 Locate
trnS-GGA gene + 44715 44801 87 Locate
rps4 gene − 45078 45683 606 Locate
trnT-UGU gene − 46055 46127 73 Locate
trnL-UAA gene + 46803 47342 540 Locate
trnF-GAA gene + 47641 47713 73 Locate
ndhJ gene − 48246 48722 477 Locate
ndhK gene − 48833 49510 678 Locate
ndhC gene − 49562 49924 363 Locate
trnV-UAC gene − 50874 51522 649 Locate
trnM-CAU gene + 51711 51783 73 Locate
atpE gene − 51979 52380 402 Locate
atpB gene − 52377 53873 1497 Locate
rbcL gene + 54658 56091 1434 Locate
accD gene + 56782 58269 1488 Locate
psaI gene + 58732 58842 111 Locate
ycf4 gene + 59297 59851 555 Locate
cemA gene + 60399 61088 690 Locate
petA gene + 61294 62256 963 Locate
psbJ gene − 63319 63441 123 Locate
psbL gene − 63571 63687 117 Locate
psbF gene − 63711 63830 120 Locate
psbE gene − 63845 64096 252 Locate
petL gene + 64903 64998 96 Locate
petG gene + 65177 65290 114 Locate
trnW-CCA gene − 65405 65478 74 Locate
trnP-UGG gene − 65649 65722 74 Locate
psaJ gene + 66013 66147 135 Locate
rpl33 gene + 66599 66799 201 Locate
rps18 gene + 66960 67265 306 Locate
rpl20 gene − 67497 67883 387 Locate
rps12 CDS − 68695 68808 114 Locate
clpP gene − 68932 70843 1912 Locate
psbB gene + 71292 72818 1527 Locate
psbT gene + 72997 73104 108 Locate
psbN gene − 73165 73296 132 Locate
psbH gene + 73402 73623 222 Locate
petB CDS + 73749 73754 6 Locate
petB gene + 73749 75102 1354 Locate
petB CDS + 74458 75099 642 Locate
petD gene + 75287 76495 1209 Locate
petD CDS + 75293 75298 6 Locate
petD CDS + 76019 76495 477 Locate
rpoA gene − 76672 77679 1008 Locate
rps11 gene − 77751 78167 417 Locate
rpl36 gene − 78277 78390 114 Locate
infA gene − 78486 78719 234 Locate
rps8 gene − 78846 79250 405 Locate
rpl14 gene − 79440 79808 369 Locate
rpl16 gene − 79940 81220 1281 Locate
rps3 gene − 81356 82018 663 Locate
rpl22 gene − 82003 82470 468 Locate
rps19 gene − 82540 82818 279 Locate
rpl2 gene − 82878 84360 1483 Locate
rpl23 gene − 84379 84660 282 Locate
trnI-CAU gene − 84826 84899 74 Locate
ycf2 gene + 84988 91821 6834 Locate
ycf15 gene + 91912 92160 249 Locate
trnL-CAA gene + 92421 92501 81 Locate
ndhB gene − 93061 95268 2208 Locate
rps7 gene − 95543 96010 468 Locate
rps12 CDS − 96064 96086 23 Locate
rps12 gene − 96064 96848 785 Locate
rps12 CDS − 96613 96847 235 Locate
trnV-GAC gene + 98451 98522 72 Locate
rrn16 gene + 98749 100239 1491 Locate
trnI-GAU gene + 100538 101549 1012 Locate
trnA-UGC gene + 101614 102481 868 Locate
rrn23 gene + 102647 105457 2811 Locate
rrn4.5 gene + 105556 105658 103 Locate
rrn5 gene + 105883 106013 131 Locate
trnR-ACG gene + 106247 106320 74 Locate
trnN-GUU gene − 106840 106911 72 Locate
ndhF gene − 108265 110481 2217 Locate
rpl32 gene + 110933 111103 171 Locate
trnL-UAG gene + 111808 111887 80 Locate
ccsA gene + 111980 112957 978 Locate
ndhD gene − 113189 114730 1542 Locate
psaC gene − 114840 115085 246 Locate
ndhE gene − 115336 115641 306 Locate
ndhG gene − 115857 116387 531 Locate
ndhI gene − 116764 117270 507 Locate
ndhA gene − 117351 119427 2077 Locate
ndhH gene − 119429 120610 1182 Locate
rps15 gene − 120710 120982 273 Locate
ycf1 gene − 121408 126924 5517 Locate
trnN-GUU gene + 127254 127325 72 Locate
trnR-ACG gene − 127846 127918 73 Locate
rrn5 gene − 128162 128282 121 Locate
rrn4.5 gene − 128507 128609 103 Locate
rrn23 gene − 128708 131518 2811 Locate
trnA-UGC gene − 131684 132551 868 Locate
trnI-GAU gene − 132616 133627 1012 Locate
rrn16 gene − 133926 135416 1491 Locate
trnV-GAC gene − 135643 135714 72 Locate
rps12 gene + 137315 138101 787 Locate
rps7 gene + 138155 138622 468 Locate
ndhB gene + 138897 141104 2208 Locate
trnL-CAA gene + 141664 141744 81 Locate
ycf15 gene − 142005 142253 249 Locate
ycf2 gene − 142344 149177 6834 Locate
trnI-CAU gene + 149266 149339 74 Locate
rpl23 gene + 149505 149786 282 Locate
rpl2 gene + 149805 151287 1483 Locate
rps19 gene + 151347 151389 43 Locate
Status Available
Accession MT012420.1
Length 151,389 bp
GC content 38.0%
Annotated genes 136
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 14 Ribosomal Protein 29 Atp Synthase 6 Rna Polymerase 4 Cytochrome 10 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 0
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources