Coordinate-aware organelle record

Salvia nanchuanensis var. pteridifolia chloroplast genome

Available MW435408.1 151,455 bp 132 coordinate-linked features
IRIR0 kb13 kb26 kb39 kb52 kb65 kb78 kb91 kb104 kb117 kb130 kb143 kbtrnH-GUG · gene · 9-82 bp · − strandpsbA · gene · 390-1,448 bp · − strandtrnK-UUU · gene · 1,670-4,264 bp · − strandmatK · gene · 1,970-3,532 bp · − strandrps16 · gene · 4,832-5,942 bp · − strandtrnQ-UUG · gene · 6,919-6,990 bp · − strandpsbK · gene · 7,383-7,562 bp · + strandpsbI · gene · 7,959-8,069 bp · + strandtrnS-GCU · gene · 8,245-8,332 bp · − strandtrnG-UCC · gene · 9,015-9,769 bp · + strandtrnR-UCU · gene · 9,952-10,023 bp · + strandATPA · gene · 10,135-11,658 bp · − strandATPF · gene · 11,758-13,003 bp · − strandATPH · gene · 13,277-13,522 bp · − strandATPI · gene · 14,493-15,236 bp · − strandrps2 · gene · 15,462-16,172 bp · − strandrpoC2 · gene · 16,391-20,581 bp · − strandrpoC1 · gene · 20,739-23,552 bp · − strandrpoB · gene · 23,579-26,791 bp · − strandtrnC-GCA · gene · 27,944-28,014 bp · + strandpetN · gene · 28,182-28,271 bp · + strandpsbM · gene · 29,248-29,352 bp · − strandtrnD-GUC · gene · 29,874-29,947 bp · − strandtrnY-GUA · gene · 30,058-30,141 bp · − strandtrnE-UUC · gene · 30,213-30,285 bp · − strandtrnT-GGU · gene · 30,815-30,886 bp · + strandpsbD · gene · 32,266-33,327 bp · + strandpsbC · gene · 33,275-34,696 bp · + strandtrnS-UGA · gene · 34,942-35,034 bp · − strandpsbZ · gene · 35,369-35,557 bp · + strandtrnG-GCC · gene · 35,829-35,899 bp · + strandtrnfM-CAU · gene · 36,078-36,151 bp · − strandrps14 · gene · 36,296-36,598 bp · − strandpsaB · gene · 36,721-38,925 bp · − strandpsaA · gene · 38,951-41,203 bp · − strandycf3 · gene · 41,987-43,930 bp · − strandtrnS-GGA · gene · 44,746-44,832 bp · + strandrps4 · gene · 45,109-45,714 bp · − strandtrnT-UGU · gene · 46,086-46,158 bp · − strandtrnL-UAA · gene · 46,840-47,379 bp · + strandtrnF-GAA · gene · 47,678-47,750 bp · + strandndhJ · gene · 48,273-48,749 bp · − strandndhK · gene · 48,860-49,537 bp · − strandndhC · gene · 49,589-49,951 bp · − strandtrnV-UAC · gene · 50,906-51,554 bp · − strandtrnM-CAU · gene · 51,743-51,815 bp · + strandATPE · gene · 52,011-52,412 bp · − strandATPB · gene · 52,409-53,905 bp · − strandrbcL · gene · 54,661-56,115 bp · + strandaccD · gene · 56,806-58,293 bp · + strandpsaI · gene · 58,767-58,877 bp · + strandycf4 · gene · 59,332-59,886 bp · + strandcemA · gene · 60,434-61,123 bp · + strandpetA · gene · 61,329-62,291 bp · + strandpsbJ · gene · 63,369-63,491 bp · − strandpsbL · gene · 63,621-63,737 bp · − strandpsbF · gene · 63,761-63,880 bp · − strandpsbE · gene · 63,895-64,146 bp · − strandpetL · gene · 64,953-65,048 bp · + strandpetG · gene · 65,227-65,340 bp · + strandtrnW-CCA · gene · 65,455-65,528 bp · − strandtrnP-UGG · gene · 65,699-65,772 bp · − strandpsaJ · gene · 66,024-66,197 bp · + strandrpl33 · gene · 66,649-66,849 bp · + strandrps18 · gene · 67,015-67,320 bp · + strandrpl20 · gene · 67,552-67,938 bp · − strandrps12 · gene · 68,751-96,902 bp · − strandrps12 · gene · 68,751-138,168 bp · + strandclpP · gene · 68,988-70,903 bp · − strandpsbB · gene · 71,352-72,878 bp · + strandpsbT · gene · 73,057-73,164 bp · + strandpsbN · gene · 73,225-73,356 bp · − strandpsbH · gene · 73,462-73,683 bp · + strandpetB · gene · 73,809-75,158 bp · + strandpetD · gene · 75,352-76,548 bp · + strandrpoA · gene · 76,725-77,732 bp · − strandrps11 · gene · 77,804-78,220 bp · − strandrpl36 · gene · 78,330-78,443 bp · − strandinfA · gene · 78,539-78,772 bp · − strandrps8 · gene · 78,899-79,303 bp · − strandrpl14 · gene · 79,495-79,863 bp · − strandrpl16 · gene · 79,995-81,278 bp · − strandrps3 · gene · 81,414-82,076 bp · − strandrpl22 · gene · 82,061-82,528 bp · − strandrps19 · gene · 82,598-82,876 bp · − strandrpl2 · gene · 82,936-84,418 bp · − strandrpl23 · gene · 84,437-84,718 bp · − strandtrnI-CAU · gene · 84,884-84,957 bp · − strandycf2 · gene · 85,046-91,876 bp · + strandycf15 · gene · 91,967-92,215 bp · + strandtrnL-CAA · gene · 92,476-92,556 bp · − strandndhB · gene · 93,116-95,269 bp · − strandrps7 · gene · 95,598-96,065 bp · − strandtrnV-GAC · gene · 98,506-98,577 bp · + strandrrn16 · gene · 98,804-100,294 bp · + strandtrnI-GAU · gene · 100,593-101,604 bp · + strandtrnA-UGC · gene · 101,669-102,536 bp · + strandrrn23 · gene · 102,702-105,510 bp · + strandrrn4.5 · gene · 105,611-105,713 bp · + strandrrn5 · gene · 105,938-106,058 bp · + strandtrnR-ACG · gene · 106,302-106,375 bp · + strandtrnN-GUU · gene · 106,895-106,966 bp · − strandndhF · gene · 108,320-110,554 bp · − strandrpl32 · gene · 110,987-111,157 bp · + strandtrnL-UAG · gene · 111,861-111,940 bp · + strandccsA · gene · 111,985-113,010 bp · + strandndhD · gene · 113,242-114,783 bp · − strandpsaC · gene · 114,893-115,138 bp · − strandndhE · gene · 115,389-115,691 bp · − strandndhG · gene · 115,910-116,440 bp · − strandndhI · gene · 116,817-117,323 bp · − strandndhA · gene · 117,404-119,494 bp · − strandndhH · gene · 119,496-120,731 bp · − strandrps15 · gene · 120,777-121,049 bp · − strandycf1 · gene · 121,475-127,102 bp · − strandtrnN-GUU · gene · 127,321-127,392 bp · + strandtrnR-ACG · gene · 127,912-127,985 bp · − strandrrn5 · gene · 128,229-128,349 bp · − strandrrn4.5 · gene · 128,574-128,676 bp · − strandrrn23 · gene · 128,777-131,585 bp · − strandtrnA-UGC · gene · 131,751-132,618 bp · − strandtrnI-GAU · gene · 132,683-133,694 bp · − strandrrn16 · gene · 133,993-135,483 bp · − strandtrnV-GAC · gene · 135,710-135,781 bp · − strandrps7 · gene · 138,222-138,689 bp · + strandndhB · gene · 139,018-141,171 bp · + strandtrnL-CAA · gene · 141,731-141,811 bp · + strandycf15 · gene · 142,072-142,320 bp · − strandycf2 · gene · 142,411-149,241 bp · − strandtrnI-CAU · gene · 149,330-149,403 bp · + strandrpl23 · gene · 149,569-149,850 bp · + strandrpl2 · gene · 149,869-151,351 bp · + strandSalvia nanchuanensis var. pteridifoliaANNOTATED PLASTOMEMW435408.1151,455 bp · 132 genesOuter ring: forward strand · inner ring: reverse strand · click a gene to open its pageGene functionTranslation RnaPhotosystem IiOtherRibosomal ProteinAtp SynthaseRna PolymeraseCytochromePhotosystem INad DehydrogenaseRibosomal RnaVerified annotationSource: NCBI GenBankAccession: MW435408.1Features: 132 coordinate-linked genesHover for coordinates · click for gene page

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features
GeneTypeGroupStrandStartEndLength
trnH-GUGgenetranslation-rna−88274
psbAgenephotosystem-ii−38914481059
trnK-UUUgenetranslation-rna−166942642595
matKgeneother−196935321563
rps16generibosomal-protein−483159421111
trnQ-UUGgenetranslation-rna−6918699072
psbKgenephotosystem-ii+73827562180
psbIgenephotosystem-ii+79588069111
trnS-GCUgenetranslation-rna−8244833288
trnG-UCCgenetranslation-rna+90149769755
trnR-UCUgenetranslation-rna+99511002372
ATPAgeneatp-synthase−10134116581524
ATPFgeneatp-synthase−11757130031246
ATPHgeneatp-synthase−1327613522246
ATPIgeneatp-synthase−1449215236744
rps2generibosomal-protein−1546116172711
rpoC2generna-polymerase−16390205814191
rpoC1generna-polymerase−20738235522814
rpoBgenerna-polymerase−23578267913213
trnC-GCAgenetranslation-rna+279432801471
petNgenecytochrome+281812827190
psbMgenephotosystem-ii−2924729352105
trnD-GUCgenetranslation-rna−298732994774
trnY-GUAgenetranslation-rna−300573014184
trnE-UUCgenetranslation-rna−302123028573
trnT-GGUgenetranslation-rna+308143088672
psbDgenephotosystem-ii+32265333271062
psbCgenephotosystem-ii+33274346961422
trnS-UGAgenetranslation-rna−349413503493
psbZgenephotosystem-ii+3536835557189
trnG-GCCgenetranslation-rna+358283589971
trnfM-CAUgenetranslation-rna−360773615174
rps14generibosomal-protein−3629536598303
psaBgenephotosystem-i−36720389252205
psaAgenephotosystem-i−38950412032253
ycf3geneother−41986439301944
trnS-GGAgenetranslation-rna+447454483287
rps4generibosomal-protein−4510845714606
trnT-UGUgenetranslation-rna−460854615873
trnL-UAAgenetranslation-rna+4683947379540
trnF-GAAgenetranslation-rna+476774775073
ndhJgenenad-dehydrogenase−4827248749477
ndhKgenenad-dehydrogenase−4885949537678
ndhCgenenad-dehydrogenase−4958849951363
trnV-UACgenetranslation-rna−5090551554649
trnM-CAUgenetranslation-rna+517425181573
ATPEgeneatp-synthase−5201052412402
ATPBgeneatp-synthase−52408539051497
rbcLgeneother+54660561151455
accDgeneother+56805582931488
psaIgenephotosystem-i+5876658877111
ycf4geneother+5933159886555
cemAgeneother+6043361123690
petAgenecytochrome+6132862291963
psbJgenephotosystem-ii−6336863491123
psbLgenephotosystem-ii−6362063737117
psbFgenephotosystem-ii−6376063880120
psbEgenephotosystem-ii−6389464146252
petLgenecytochrome+649526504896
petGgenecytochrome+6522665340114
trnW-CCAgenetranslation-rna−654546552874
trnP-UGGgenetranslation-rna−656986577274
psaJgenephotosystem-i+6602366197174
rpl33generibosomal-protein+6664866849201
rps18generibosomal-protein+6701467320306
rpl20generibosomal-protein−6755167938387
rps12generibosomal-protein−687509690228152
rps12generibosomal-protein+6875013816869418
clpPgeneother−68987709031916
psbBgenephotosystem-ii+71351728781527
psbTgenephotosystem-ii+7305673164108
psbNgenephotosystem-ii−7322473356132
psbHgenephotosystem-ii+7346173683222
petBgenecytochrome+73808751581350
petDgenecytochrome+75351765481197
rpoAgenerna-polymerase−76724777321008
rps11generibosomal-protein−7780378220417
rpl36generibosomal-protein−7832978443114
infAgeneother−7853878772234
rps8generibosomal-protein−7889879303405
rpl14generibosomal-protein−7949479863369
rpl16generibosomal-protein−79994812781284
rps3generibosomal-protein−8141382076663
rpl22generibosomal-protein−8206082528468
rps19generibosomal-protein−8259782876279
rpl2generibosomal-protein−82935844181483
rpl23generibosomal-protein−8443684718282
trnI-CAUgenetranslation-rna−848838495774
ycf2geneother+85045918766831
ycf15geneother+9196692215249
trnL-CAAgenetranslation-rna−924759255681
ndhBgenenad-dehydrogenase−93115952692154
rps7generibosomal-protein−9559796065468
trnV-GACgenetranslation-rna+985059857772
rrn16generibosomal-rna+988031002941491
trnI-GAUgenetranslation-rna+1005921016041012
trnA-UGCgenetranslation-rna+101668102536868
rrn23generibosomal-rna+1027011055102809
rrn4.5generibosomal-rna+105610105713103
rrn5generibosomal-rna+105937106058121
trnR-ACGgenetranslation-rna+10630110637574
trnN-GUUgenetranslation-rna−10689410696672
ndhFgenenad-dehydrogenase−1083191105542235
rpl32generibosomal-protein+110986111157171
trnL-UAGgenetranslation-rna+11186011194080
ccsAgeneother+1119841130101026
ndhDgenenad-dehydrogenase−1132411147831542
psaCgenephotosystem-i−114892115138246
ndhEgenenad-dehydrogenase−115388115691303
ndhGgenenad-dehydrogenase−115909116440531
ndhIgenenad-dehydrogenase−116816117323507
ndhAgenenad-dehydrogenase−1174031194942091
ndhHgenenad-dehydrogenase−1194951207311236
rps15generibosomal-protein−120776121049273
ycf1geneother−1214741271025628
trnN-GUUgenetranslation-rna+12732012739272
trnR-ACGgenetranslation-rna−12791112798574
rrn5generibosomal-rna−128228128349121
rrn4.5generibosomal-rna−128573128676103
rrn23generibosomal-rna−1287761315852809
trnA-UGCgenetranslation-rna−131750132618868
trnI-GAUgenetranslation-rna−1326821336941012
rrn16generibosomal-rna−1339921354831491
trnV-GACgenetranslation-rna−13570913578172
rps7generibosomal-protein+138221138689468
ndhBgenenad-dehydrogenase+1390171411712154
trnL-CAAgenetranslation-rna+14173014181181
ycf15geneother−142071142320249
ycf2geneother−1424101492416831
trnI-CAUgenetranslation-rna+14932914940374
rpl23generibosomal-protein+149568149850282
rpl2generibosomal-protein+1498681513511483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources