Salvia nanchuanensis var. pteridifolia chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · MW435408.1 · 9–82 bp · −
psbA · MW435408.1 · 390–1,448 bp · −
trnK-UUU · MW435408.1 · 1,670–4,264 bp · −
matK · MW435408.1 · 1,970–3,532 bp · −
rps16 · MW435408.1 · 4,832–5,942 bp · −
trnQ-UUG · MW435408.1 · 6,919–6,990 bp · −
trnS-GCU · MW435408.1 · 8,245–8,332 bp · −
ATPA · MW435408.1 · 10,135–11,658 bp · −
ATPF · MW435408.1 · 11,758–13,003 bp · −
ATPH · MW435408.1 · 13,277–13,522 bp · −
ATPI · MW435408.1 · 14,493–15,236 bp · −
rps2 · MW435408.1 · 15,462–16,172 bp · −
rpoC2 · MW435408.1 · 16,391–20,581 bp · −
rpoC1 · MW435408.1 · 20,739–23,552 bp · −
rpoB · MW435408.1 · 23,579–26,791 bp · −
psbM · MW435408.1 · 29,248–29,352 bp · −
trnD-GUC · MW435408.1 · 29,874–29,947 bp · −
trnY-GUA · MW435408.1 · 30,058–30,141 bp · −
trnE-UUC · MW435408.1 · 30,213–30,285 bp · −
trnS-UGA · MW435408.1 · 34,942–35,034 bp · −
trnfM-CAU · MW435408.1 · 36,078–36,151 bp · −
rps14 · MW435408.1 · 36,296–36,598 bp · −
psaB · MW435408.1 · 36,721–38,925 bp · −
psaA · MW435408.1 · 38,951–41,203 bp · −
ycf3 · MW435408.1 · 41,987–43,930 bp · −
rps4 · MW435408.1 · 45,109–45,714 bp · −
trnT-UGU · MW435408.1 · 46,086–46,158 bp · −
ndhJ · MW435408.1 · 48,273–48,749 bp · −
ndhK · MW435408.1 · 48,860–49,537 bp · −
ndhC · MW435408.1 · 49,589–49,951 bp · −
trnV-UAC · MW435408.1 · 50,906–51,554 bp · −
ATPE · MW435408.1 · 52,011–52,412 bp · −
ATPB · MW435408.1 · 52,409–53,905 bp · −
psbJ · MW435408.1 · 63,369–63,491 bp · −
psbL · MW435408.1 · 63,621–63,737 bp · −
psbF · MW435408.1 · 63,761–63,880 bp · −
psbE · MW435408.1 · 63,895–64,146 bp · −
trnW-CCA · MW435408.1 · 65,455–65,528 bp · −
trnP-UGG · MW435408.1 · 65,699–65,772 bp · −
rpl20 · MW435408.1 · 67,552–67,938 bp · −
rps12 · MW435408.1 · 68,751–68,864 bp · −
rps12 · MW435408.1 · 96,119–96,902 bp · −
clpP · MW435408.1 · 68,988–70,903 bp · −
psbN · MW435408.1 · 73,225–73,356 bp · −
rpoA · MW435408.1 · 76,725–77,732 bp · −
rps11 · MW435408.1 · 77,804–78,220 bp · −
rpl36 · MW435408.1 · 78,330–78,443 bp · −
infA · MW435408.1 · 78,539–78,772 bp · −
rps8 · MW435408.1 · 78,899–79,303 bp · −
rpl14 · MW435408.1 · 79,495–79,863 bp · −
rpl16 · MW435408.1 · 79,995–81,278 bp · −
rps3 · MW435408.1 · 81,414–82,076 bp · −
rpl22 · MW435408.1 · 82,061–82,528 bp · −
rps19 · MW435408.1 · 82,598–82,876 bp · −
rpl2 · MW435408.1 · 82,936–84,418 bp · −
rpl23 · MW435408.1 · 84,437–84,718 bp · −
trnI-CAU · MW435408.1 · 84,884–84,957 bp · −
trnL-CAA · MW435408.1 · 92,476–92,556 bp · −
ndhB · MW435408.1 · 93,116–95,269 bp · −
rps7 · MW435408.1 · 95,598–96,065 bp · −
trnN-GUU · MW435408.1 · 106,895–106,966 bp · −
ndhF · MW435408.1 · 108,320–110,554 bp · −
ndhD · MW435408.1 · 113,242–114,783 bp · −
psaC · MW435408.1 · 114,893–115,138 bp · −
ndhE · MW435408.1 · 115,389–115,691 bp · −
ndhG · MW435408.1 · 115,910–116,440 bp · −
ndhI · MW435408.1 · 116,817–117,323 bp · −
ndhA · MW435408.1 · 117,404–119,494 bp · −
ndhH · MW435408.1 · 119,496–120,731 bp · −
rps15 · MW435408.1 · 120,777–121,049 bp · −
ycf1 · MW435408.1 · 121,475–127,102 bp · −
trnR-ACG · MW435408.1 · 127,912–127,985 bp · −
rrn5 · MW435408.1 · 128,229–128,349 bp · −
rrn4.5 · MW435408.1 · 128,574–128,676 bp · −
rrn23 · MW435408.1 · 128,777–131,585 bp · −
trnA-UGC · MW435408.1 · 131,751–132,618 bp · −
trnI-GAU · MW435408.1 · 132,683–133,694 bp · −
rrn16 · MW435408.1 · 133,993–135,483 bp · −
trnV-GAC · MW435408.1 · 135,710–135,781 bp · −
ycf15 · MW435408.1 · 142,072–142,320 bp · −
ycf2 · MW435408.1 · 142,411–149,241 bp · −
psbK · MW435408.1 · 7,383–7,562 bp · +
psbI · MW435408.1 · 7,959–8,069 bp · +
trnG-UCC · MW435408.1 · 9,015–9,769 bp · +
trnR-UCU · MW435408.1 · 9,952–10,023 bp · +
trnC-GCA · MW435408.1 · 27,944–28,014 bp · +
petN · MW435408.1 · 28,182–28,271 bp · +
trnT-GGU · MW435408.1 · 30,815–30,886 bp · +
psbD · MW435408.1 · 32,266–33,327 bp · +
psbC · MW435408.1 · 33,275–34,696 bp · +
psbZ · MW435408.1 · 35,369–35,557 bp · +
trnG-GCC · MW435408.1 · 35,829–35,899 bp · +
trnS-GGA · MW435408.1 · 44,746–44,832 bp · +
trnL-UAA · MW435408.1 · 46,840–47,379 bp · +
trnF-GAA · MW435408.1 · 47,678–47,750 bp · +
trnM-CAU · MW435408.1 · 51,743–51,815 bp · +
rbcL · MW435408.1 · 54,661–56,115 bp · +
accD · MW435408.1 · 56,806–58,293 bp · +
psaI · MW435408.1 · 58,767–58,877 bp · +
ycf4 · MW435408.1 · 59,332–59,886 bp · +
cemA · MW435408.1 · 60,434–61,123 bp · +
petA · MW435408.1 · 61,329–62,291 bp · +
petL · MW435408.1 · 64,953–65,048 bp · +
petG · MW435408.1 · 65,227–65,340 bp · +
psaJ · MW435408.1 · 66,024–66,197 bp · +
rpl33 · MW435408.1 · 66,649–66,849 bp · +
rps18 · MW435408.1 · 67,015–67,320 bp · +
rps12 · MW435408.1 · 137,385–138,168 bp · +
psbB · MW435408.1 · 71,352–72,878 bp · +
psbT · MW435408.1 · 73,057–73,164 bp · +
psbH · MW435408.1 · 73,462–73,683 bp · +
petB · MW435408.1 · 73,809–75,158 bp · +
petD · MW435408.1 · 75,352–76,548 bp · +
ycf2 · MW435408.1 · 85,046–91,876 bp · +
ycf15 · MW435408.1 · 91,967–92,215 bp · +
trnV-GAC · MW435408.1 · 98,506–98,577 bp · +
rrn16 · MW435408.1 · 98,804–100,294 bp · +
trnI-GAU · MW435408.1 · 100,593–101,604 bp · +
trnA-UGC · MW435408.1 · 101,669–102,536 bp · +
rrn23 · MW435408.1 · 102,702–105,510 bp · +
rrn4.5 · MW435408.1 · 105,611–105,713 bp · +
rrn5 · MW435408.1 · 105,938–106,058 bp · +
trnR-ACG · MW435408.1 · 106,302–106,375 bp · +
rpl32 · MW435408.1 · 110,987–111,157 bp · +
trnL-UAG · MW435408.1 · 111,861–111,940 bp · +
ccsA · MW435408.1 · 111,985–113,010 bp · +
trnN-GUU · MW435408.1 · 127,321–127,392 bp · +
rps7 · MW435408.1 · 138,222–138,689 bp · +
ndhB · MW435408.1 · 139,018–141,171 bp · +
trnL-CAA · MW435408.1 · 141,731–141,811 bp · +
trnI-CAU · MW435408.1 · 149,330–149,403 bp · +
rpl23 · MW435408.1 · 149,569–149,850 bp · +
rpl2 · MW435408.1 · 149,869–151,351 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Salvia nanchuanensis var. pteridifolia
ANNOTATED PLASTOME
MW435408.1
151,455 bp · 132 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37864 75728 113591 151455 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU ATPA ATPF ATPH ATPI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC ATPE ATPB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
133 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 9 82 74 Locate
psbA gene − 390 1448 1059 Locate
trnK-UUU gene − 1670 4264 2595 Locate
matK gene − 1970 3532 1563 Locate
rps16 gene − 4832 5942 1111 Locate
trnQ-UUG gene − 6919 6990 72 Locate
psbK gene + 7383 7562 180 Locate
psbI gene + 7959 8069 111 Locate
trnS-GCU gene − 8245 8332 88 Locate
trnG-UCC gene + 9015 9769 755 Locate
trnR-UCU gene + 9952 10023 72 Locate
ATPA gene − 10135 11658 1524 Locate
ATPF gene − 11758 13003 1246 Locate
ATPH gene − 13277 13522 246 Locate
ATPI gene − 14493 15236 744 Locate
rps2 gene − 15462 16172 711 Locate
rpoC2 gene − 16391 20581 4191 Locate
rpoC1 gene − 20739 23552 2814 Locate
rpoB gene − 23579 26791 3213 Locate
trnC-GCA gene + 27944 28014 71 Locate
petN gene + 28182 28271 90 Locate
psbM gene − 29248 29352 105 Locate
trnD-GUC gene − 29874 29947 74 Locate
trnY-GUA gene − 30058 30141 84 Locate
trnE-UUC gene − 30213 30285 73 Locate
trnT-GGU gene + 30815 30886 72 Locate
psbD gene + 32266 33327 1062 Locate
psbC gene + 33275 34696 1422 Locate
trnS-UGA gene − 34942 35034 93 Locate
psbZ gene + 35369 35557 189 Locate
trnG-GCC gene + 35829 35899 71 Locate
trnfM-CAU gene − 36078 36151 74 Locate
rps14 gene − 36296 36598 303 Locate
psaB gene − 36721 38925 2205 Locate
psaA gene − 38951 41203 2253 Locate
ycf3 gene − 41987 43930 1944 Locate
trnS-GGA gene + 44746 44832 87 Locate
rps4 gene − 45109 45714 606 Locate
trnT-UGU gene − 46086 46158 73 Locate
trnL-UAA gene + 46840 47379 540 Locate
trnF-GAA gene + 47678 47750 73 Locate
ndhJ gene − 48273 48749 477 Locate
ndhK gene − 48860 49537 678 Locate
ndhC gene − 49589 49951 363 Locate
trnV-UAC gene − 50906 51554 649 Locate
trnM-CAU gene + 51743 51815 73 Locate
ATPE gene − 52011 52412 402 Locate
ATPB gene − 52409 53905 1497 Locate
rbcL gene + 54661 56115 1455 Locate
accD gene + 56806 58293 1488 Locate
psaI gene + 58767 58877 111 Locate
ycf4 gene + 59332 59886 555 Locate
cemA gene + 60434 61123 690 Locate
petA gene + 61329 62291 963 Locate
psbJ gene − 63369 63491 123 Locate
psbL gene − 63621 63737 117 Locate
psbF gene − 63761 63880 120 Locate
psbE gene − 63895 64146 252 Locate
petL gene + 64953 65048 96 Locate
petG gene + 65227 65340 114 Locate
trnW-CCA gene − 65455 65528 74 Locate
trnP-UGG gene − 65699 65772 74 Locate
psaJ gene + 66024 66197 174 Locate
rpl33 gene + 66649 66849 201 Locate
rps18 gene + 67015 67320 306 Locate
rpl20 gene − 67552 67938 387 Locate
rps12 gene − 68751 68864 114 Locate
clpP gene − 68988 70903 1916 Locate
psbB gene + 71352 72878 1527 Locate
psbT gene + 73057 73164 108 Locate
psbN gene − 73225 73356 132 Locate
psbH gene + 73462 73683 222 Locate
petB gene + 73809 75158 1350 Locate
petD gene + 75352 76548 1197 Locate
rpoA gene − 76725 77732 1008 Locate
rps11 gene − 77804 78220 417 Locate
rpl36 gene − 78330 78443 114 Locate
infA gene − 78539 78772 234 Locate
rps8 gene − 78899 79303 405 Locate
rpl14 gene − 79495 79863 369 Locate
rpl16 gene − 79995 81278 1284 Locate
rps3 gene − 81414 82076 663 Locate
rpl22 gene − 82061 82528 468 Locate
rps19 gene − 82598 82876 279 Locate
rpl2 gene − 82936 84418 1483 Locate
rpl23 gene − 84437 84718 282 Locate
trnI-CAU gene − 84884 84957 74 Locate
ycf2 gene + 85046 91876 6831 Locate
ycf15 gene + 91967 92215 249 Locate
trnL-CAA gene − 92476 92556 81 Locate
ndhB gene − 93116 95269 2154 Locate
rps7 gene − 95598 96065 468 Locate
rps12 gene − 96119 96902 784 Locate
trnV-GAC gene + 98506 98577 72 Locate
rrn16 gene + 98804 100294 1491 Locate
trnI-GAU gene + 100593 101604 1012 Locate
trnA-UGC gene + 101669 102536 868 Locate
rrn23 gene + 102702 105510 2809 Locate
rrn4.5 gene + 105611 105713 103 Locate
rrn5 gene + 105938 106058 121 Locate
trnR-ACG gene + 106302 106375 74 Locate
trnN-GUU gene − 106895 106966 72 Locate
ndhF gene − 108320 110554 2235 Locate
rpl32 gene + 110987 111157 171 Locate
trnL-UAG gene + 111861 111940 80 Locate
ccsA gene + 111985 113010 1026 Locate
ndhD gene − 113242 114783 1542 Locate
psaC gene − 114893 115138 246 Locate
ndhE gene − 115389 115691 303 Locate
ndhG gene − 115910 116440 531 Locate
ndhI gene − 116817 117323 507 Locate
ndhA gene − 117404 119494 2091 Locate
ndhH gene − 119496 120731 1236 Locate
rps15 gene − 120777 121049 273 Locate
ycf1 gene − 121475 127102 5628 Locate
trnN-GUU gene + 127321 127392 72 Locate
trnR-ACG gene − 127912 127985 74 Locate
rrn5 gene − 128229 128349 121 Locate
rrn4.5 gene − 128574 128676 103 Locate
rrn23 gene − 128777 131585 2809 Locate
trnA-UGC gene − 131751 132618 868 Locate
trnI-GAU gene − 132683 133694 1012 Locate
rrn16 gene − 133993 135483 1491 Locate
trnV-GAC gene − 135710 135781 72 Locate
rps12 gene + 137385 138168 784 Locate
rps7 gene + 138222 138689 468 Locate
ndhB gene + 139018 141171 2154 Locate
trnL-CAA gene + 141731 141811 81 Locate
ycf15 gene − 142072 142320 249 Locate
ycf2 gene − 142411 149241 6831 Locate
trnI-CAU gene + 149330 149403 74 Locate
rpl23 gene + 149569 149850 282 Locate
rpl2 gene + 149869 151351 1483 Locate
Status Available
Accession MW435408.1
Length 151,455 bp
GC content 38.0%
Annotated genes 132
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 14 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources