Salvia nanchuanensis chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
trnH-GUG · NC_058851.1 · 16–89 bp · −
psbA · NC_058851.1 · 397–1,455 bp · −
trnK-UUU · NC_058851.1 · 1,678–4,271 bp · −
matK · NC_058851.1 · 1,977–3,539 bp · −
rps16 · NC_058851.1 · 4,839–5,949 bp · −
trnQ-UUG · NC_058851.1 · 6,929–7,000 bp · −
trnS-GCU · NC_058851.1 · 8,244–8,331 bp · −
atpA · NC_058851.1 · 10,133–11,656 bp · −
atpF · NC_058851.1 · 11,758–13,005 bp · −
atpH · NC_058851.1 · 13,279–13,524 bp · −
atpI · NC_058851.1 · 14,495–15,238 bp · −
rps2 · NC_058851.1 · 15,463–16,173 bp · −
rpoC2 · NC_058851.1 · 16,383–20,570 bp · −
rpoC1 · NC_058851.1 · 20,728–23,541 bp · −
rpoB · NC_058851.1 · 23,568–26,780 bp · −
psbM · NC_058851.1 · 29,224–29,328 bp · −
trnD-GUC · NC_058851.1 · 29,847–29,920 bp · −
trnY-GUA · NC_058851.1 · 30,031–30,114 bp · −
trnE-UUC · NC_058851.1 · 30,186–30,258 bp · −
trnS-UGA · NC_058851.1 · 34,925–35,017 bp · −
trnfM-CAU · NC_058851.1 · 36,062–36,135 bp · −
rps14 · NC_058851.1 · 36,280–36,582 bp · −
psaB · NC_058851.1 · 36,705–38,909 bp · −
psaA · NC_058851.1 · 38,935–41,187 bp · −
ycf3 · NC_058851.1 · 41,971–43,909 bp · −
rps4 · NC_058851.1 · 45,089–45,694 bp · −
trnT-UGU · NC_058851.1 · 46,073–46,145 bp · −
ndhJ · NC_058851.1 · 48,264–48,740 bp · −
ndhK · NC_058851.1 · 48,851–49,528 bp · −
ndhC · NC_058851.1 · 49,580–49,942 bp · −
trnV-UAC · NC_058851.1 · 50,887–51,535 bp · −
atpE · NC_058851.1 · 51,992–52,393 bp · −
atpB · NC_058851.1 · 52,390–53,886 bp · −
psbJ · NC_058851.1 · 63,374–63,496 bp · −
psbL · NC_058851.1 · 63,626–63,742 bp · −
psbF · NC_058851.1 · 63,766–63,885 bp · −
psbE · NC_058851.1 · 63,900–64,151 bp · −
trnW-CCA · NC_058851.1 · 65,461–65,534 bp · −
trnP-UGG · NC_058851.1 · 65,705–65,778 bp · −
rpl20 · NC_058851.1 · 67,559–67,945 bp · −
rps12 · NC_058851.1 · 68,759–68,872 bp · −
rps12 · NC_058851.1 · 96,126–96,909 bp · −
clpP · NC_058851.1 · 68,996–70,908 bp · −
psbN · NC_058851.1 · 73,232–73,363 bp · −
rpoA · NC_058851.1 · 76,733–77,740 bp · −
rps11 · NC_058851.1 · 77,812–78,228 bp · −
rpl36 · NC_058851.1 · 78,338–78,451 bp · −
infA · NC_058851.1 · 78,547–78,780 bp · −
rps8 · NC_058851.1 · 78,907–79,311 bp · −
rpl14 · NC_058851.1 · 79,503–79,871 bp · −
rpl16 · NC_058851.1 · 80,003–81,282 bp · −
rps3 · NC_058851.1 · 81,418–82,080 bp · −
rpl22 · NC_058851.1 · 82,065–82,532 bp · −
rps19 · NC_058851.1 · 82,602–82,751 bp · −
rpl2 · NC_058851.1 · 82,940–84,422 bp · −
rpl23 · NC_058851.1 · 84,441–84,722 bp · −
trnI-CAU · NC_058851.1 · 84,888–84,961 bp · −
trnL-CAA · NC_058851.1 · 92,483–92,563 bp · −
ndhB · NC_058851.1 · 93,123–95,276 bp · −
rps7 · NC_058851.1 · 95,605–96,072 bp · −
trnN-GUU · NC_058851.1 · 106,952–107,023 bp · −
ndhF · NC_058851.1 · 108,378–110,597 bp · −
ndhD · NC_058851.1 · 113,305–114,846 bp · −
psaC · NC_058851.1 · 114,967–115,212 bp · −
ndhE · NC_058851.1 · 115,463–115,768 bp · −
ndhG · NC_058851.1 · 115,984–116,514 bp · −
ndhI · NC_058851.1 · 116,885–117,391 bp · −
ndhA · NC_058851.1 · 117,472–119,548 bp · −
ndhH · NC_058851.1 · 119,550–120,731 bp · −
rps15 · NC_058851.1 · 120,831–121,103 bp · −
ycf1 · NC_058851.1 · 121,529–127,048 bp · −
trnR-ACG · NC_058851.1 · 127,969–128,042 bp · −
rrn5 · NC_058851.1 · 128,286–128,406 bp · −
rrn4.5 · NC_058851.1 · 128,662–128,764 bp · −
rrn23 · NC_058851.1 · 128,863–131,673 bp · −
trnA-UGC · NC_058851.1 · 131,839–132,706 bp · −
trnI-GAU · NC_058851.1 · 132,771–133,782 bp · −
rrn16 · NC_058851.1 · 134,081–135,571 bp · −
trnV-GAC · NC_058851.1 · 135,798–135,869 bp · −
ycf15 · NC_058851.1 · 142,182–142,379 bp · −
ycf2 · NC_058851.1 · 142,521–149,354 bp · −
psbK · NC_058851.1 · 7,393–7,572 bp · +
psbI · NC_058851.1 · 7,969–8,079 bp · +
trnG-UCC · NC_058851.1 · 9,016–9,768 bp · +
trnR-UCU · NC_058851.1 · 9,950–10,021 bp · +
trnC-GCA · NC_058851.1 · 27,925–27,995 bp · +
petN · NC_058851.1 · 28,158–28,247 bp · +
trnT-GGU · NC_058851.1 · 30,797–30,868 bp · +
psbD · NC_058851.1 · 32,248–33,309 bp · +
psbC · NC_058851.1 · 33,257–34,678 bp · +
psbZ · NC_058851.1 · 35,352–35,540 bp · +
trnG-GCC · NC_058851.1 · 35,812–35,882 bp · +
trnS-GGA · NC_058851.1 · 44,726–44,812 bp · +
trnL-UAA · NC_058851.1 · 46,821–47,360 bp · +
trnF-GAA · NC_058851.1 · 47,659–47,731 bp · +
trnM-CAU · NC_058851.1 · 51,724–51,796 bp · +
rbcL · NC_058851.1 · 54,671–56,104 bp · +
accD · NC_058851.1 · 56,814–58,301 bp · +
psaI · NC_058851.1 · 58,771–58,881 bp · +
ycf4 · NC_058851.1 · 59,337–59,891 bp · +
cemA · NC_058851.1 · 60,439–61,128 bp · +
petA · NC_058851.1 · 61,340–62,302 bp · +
petL · NC_058851.1 · 64,958–65,053 bp · +
petG · NC_058851.1 · 65,233–65,346 bp · +
psaJ · NC_058851.1 · 66,069–66,203 bp · +
rpl33 · NC_058851.1 · 66,655–66,855 bp · +
rps18 · NC_058851.1 · 67,021–67,326 bp · +
rps12 · NC_058851.1 · 137,495–138,278 bp · +
psbB · NC_058851.1 · 71,357–72,883 bp · +
psbT · NC_058851.1 · 73,064–73,171 bp · +
psbH · NC_058851.1 · 73,469–73,690 bp · +
petB · NC_058851.1 · 73,816–75,166 bp · +
petD · NC_058851.1 · 75,360–76,556 bp · +
ycf2 · NC_058851.1 · 85,050–91,883 bp · +
ycf15 · NC_058851.1 · 92,025–92,222 bp · +
trnV-GAC · NC_058851.1 · 98,532–98,603 bp · +
rrn16 · NC_058851.1 · 98,830–100,320 bp · +
trnI-GAU · NC_058851.1 · 100,619–101,630 bp · +
trnA-UGC · NC_058851.1 · 101,695–102,562 bp · +
rrn23 · NC_058851.1 · 102,728–105,538 bp · +
rrn4.5 · NC_058851.1 · 105,637–105,739 bp · +
rrn5 · NC_058851.1 · 105,995–106,115 bp · +
trnR-ACG · NC_058851.1 · 106,359–106,432 bp · +
rpl32 · NC_058851.1 · 111,048–111,218 bp · +
trnL-UAG · NC_058851.1 · 111,925–112,004 bp · +
ccsA · NC_058851.1 · 112,097–113,074 bp · +
trnN-GUU · NC_058851.1 · 127,378–127,449 bp · +
rps7 · NC_058851.1 · 138,332–138,799 bp · +
ndhB · NC_058851.1 · 139,128–141,281 bp · +
trnL-CAA · NC_058851.1 · 141,841–141,921 bp · +
trnI-CAU · NC_058851.1 · 149,443–149,516 bp · +
rpl23 · NC_058851.1 · 149,682–149,963 bp · +
rpl2 · NC_058851.1 · 149,982–151,464 bp · +
rps19 · NC_058851.1 · 151,524–151,559 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Salvia nanchuanensis
ANNOTATED PLASTOME
NC_058851.1
151,568 bp · 133 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37892 75784 113676 151568 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2 rps19
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
134 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 16 89 74 Locate
psbA gene − 397 1455 1059 Locate
trnK-UUU gene − 1678 4271 2594 Locate
matK gene − 1977 3539 1563 Locate
rps16 gene − 4839 5949 1111 Locate
trnQ-UUG gene − 6929 7000 72 Locate
psbK gene + 7393 7572 180 Locate
psbI gene + 7969 8079 111 Locate
trnS-GCU gene − 8244 8331 88 Locate
trnG-UCC gene + 9016 9768 753 Locate
trnR-UCU gene + 9950 10021 72 Locate
atpA gene − 10133 11656 1524 Locate
atpF gene − 11758 13005 1248 Locate
atpH gene − 13279 13524 246 Locate
atpI gene − 14495 15238 744 Locate
rps2 gene − 15463 16173 711 Locate
rpoC2 gene − 16383 20570 4188 Locate
rpoC1 gene − 20728 23541 2814 Locate
rpoB gene − 23568 26780 3213 Locate
trnC-GCA gene + 27925 27995 71 Locate
petN gene + 28158 28247 90 Locate
psbM gene − 29224 29328 105 Locate
trnD-GUC gene − 29847 29920 74 Locate
trnY-GUA gene − 30031 30114 84 Locate
trnE-UUC gene − 30186 30258 73 Locate
trnT-GGU gene + 30797 30868 72 Locate
psbD gene + 32248 33309 1062 Locate
psbC gene + 33257 34678 1422 Locate
trnS-UGA gene − 34925 35017 93 Locate
psbZ gene + 35352 35540 189 Locate
trnG-GCC gene + 35812 35882 71 Locate
trnfM-CAU gene − 36062 36135 74 Locate
rps14 gene − 36280 36582 303 Locate
psaB gene − 36705 38909 2205 Locate
psaA gene − 38935 41187 2253 Locate
ycf3 gene − 41971 43909 1939 Locate
trnS-GGA gene + 44726 44812 87 Locate
rps4 gene − 45089 45694 606 Locate
trnT-UGU gene − 46073 46145 73 Locate
trnL-UAA gene + 46821 47360 540 Locate
trnF-GAA gene + 47659 47731 73 Locate
ndhJ gene − 48264 48740 477 Locate
ndhK gene − 48851 49528 678 Locate
ndhC gene − 49580 49942 363 Locate
trnV-UAC gene − 50887 51535 649 Locate
trnM-CAU gene + 51724 51796 73 Locate
atpE gene − 51992 52393 402 Locate
atpB gene − 52390 53886 1497 Locate
rbcL gene + 54671 56104 1434 Locate
accD gene + 56814 58301 1488 Locate
psaI gene + 58771 58881 111 Locate
ycf4 gene + 59337 59891 555 Locate
cemA gene + 60439 61128 690 Locate
petA gene + 61340 62302 963 Locate
psbJ gene − 63374 63496 123 Locate
psbL gene − 63626 63742 117 Locate
psbF gene − 63766 63885 120 Locate
psbE gene − 63900 64151 252 Locate
petL gene + 64958 65053 96 Locate
petG gene + 65233 65346 114 Locate
trnW-CCA gene − 65461 65534 74 Locate
trnP-UGG gene − 65705 65778 74 Locate
psaJ gene + 66069 66203 135 Locate
rpl33 gene + 66655 66855 201 Locate
rps18 gene + 67021 67326 306 Locate
rpl20 gene − 67559 67945 387 Locate
rps12 gene − 68759 68872 114 Locate
clpP gene − 68996 70908 1913 Locate
psbB gene + 71357 72883 1527 Locate
psbT gene + 73064 73171 108 Locate
psbN gene − 73232 73363 132 Locate
psbH gene + 73469 73690 222 Locate
petB gene + 73816 75166 1351 Locate
petD gene + 75360 76556 1197 Locate
rpoA gene − 76733 77740 1008 Locate
rps11 gene − 77812 78228 417 Locate
rpl36 gene − 78338 78451 114 Locate
infA gene − 78547 78780 234 Locate
rps8 gene − 78907 79311 405 Locate
rpl14 gene − 79503 79871 369 Locate
rpl16 gene − 80003 81282 1280 Locate
rps3 gene − 81418 82080 663 Locate
rpl22 gene − 82065 82532 468 Locate
rps19 gene − 82602 82751 150 Locate
rpl2 gene − 82940 84422 1483 Locate
rpl23 gene − 84441 84722 282 Locate
trnI-CAU gene − 84888 84961 74 Locate
ycf2 gene + 85050 91883 6834 Locate
ycf15 gene + 92025 92222 198 Locate
trnL-CAA gene − 92483 92563 81 Locate
ndhB gene − 93123 95276 2154 Locate
rps7 gene − 95605 96072 468 Locate
rps12 gene − 96126 96909 784 Locate
trnV-GAC gene + 98532 98603 72 Locate
rrn16 gene + 98830 100320 1491 Locate
trnI-GAU gene + 100619 101630 1012 Locate
trnA-UGC gene + 101695 102562 868 Locate
rrn23 gene + 102728 105538 2811 Locate
rrn4.5 gene + 105637 105739 103 Locate
rrn5 gene + 105995 106115 121 Locate
trnR-ACG gene + 106359 106432 74 Locate
trnN-GUU gene − 106952 107023 72 Locate
ndhF gene − 108378 110597 2220 Locate
rpl32 gene + 111048 111218 171 Locate
trnL-UAG gene + 111925 112004 80 Locate
ccsA gene + 112097 113074 978 Locate
ndhD gene − 113305 114846 1542 Locate
psaC gene − 114967 115212 246 Locate
ndhE gene − 115463 115768 306 Locate
ndhG gene − 115984 116514 531 Locate
ndhI gene − 116885 117391 507 Locate
ndhA gene − 117472 119548 2077 Locate
ndhH gene − 119550 120731 1182 Locate
rps15 gene − 120831 121103 273 Locate
ycf1 gene − 121529 127048 5520 Locate
trnN-GUU gene + 127378 127449 72 Locate
trnR-ACG gene − 127969 128042 74 Locate
rrn5 gene − 128286 128406 121 Locate
rrn4.5 gene − 128662 128764 103 Locate
rrn23 gene − 128863 131673 2811 Locate
trnA-UGC gene − 131839 132706 868 Locate
trnI-GAU gene − 132771 133782 1012 Locate
rrn16 gene − 134081 135571 1491 Locate
trnV-GAC gene − 135798 135869 72 Locate
rps12 gene + 137495 138278 784 Locate
rps7 gene + 138332 138799 468 Locate
ndhB gene + 139128 141281 2154 Locate
trnL-CAA gene + 141841 141921 81 Locate
ycf15 gene − 142182 142379 198 Locate
ycf2 gene − 142521 149354 6834 Locate
trnI-CAU gene + 149443 149516 74 Locate
rpl23 gene + 149682 149963 282 Locate
rpl2 gene + 149982 151464 1483 Locate
rps19 gene + 151524 151559 36 Locate
Status Available
Accession NC_058851.1
Length 151,568 bp
GC content 38.0%
Annotated genes 133
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 14 Ribosomal Protein 27 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 0
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources