Coordinate-aware organelle record

Salvia nilotica chloroplast genome

Available NC_050898.1 151,450 bp 134 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

134 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	8	82	74
psbA	gene	photosystem-ii	−	334	1393	1059
trnK-UUU	gene	translation-rna	−	1625	4212	2587
matK	gene	other	−	1943	3473	1530
rps16	gene	ribosomal-protein	−	4767	5868	1101
trnQ-UUG	gene	translation-rna	−	6424	6496	72
psbK	gene	photosystem-ii	+	6868	7057	189
psbI	gene	photosystem-ii	+	7448	7559	111
trnS-GCU	gene	translation-rna	−	7713	7801	88
trnG-UCC	gene	translation-rna	+	8512	9266	754
trnR-UCU	gene	translation-rna	+	9446	9518	72
atpA	gene	atp-synthase	−	9623	11147	1524
atpF	gene	atp-synthase	−	11248	12500	1252
atpH	gene	atp-synthase	−	12774	13020	246
atpI	gene	atp-synthase	−	14045	14789	744
rps2	gene	ribosomal-protein	−	15020	15731	711
rpoC2	gene	rna-polymerase	−	15949	20137	4188
rpoC1	gene	rna-polymerase	−	20301	23124	2823
rpoB	gene	rna-polymerase	−	23150	26363	3213
trnC-GCA	gene	translation-rna	+	27506	27577	71
petN	gene	cytochrome	+	27740	27830	90
psbM	gene	photosystem-ii	−	28787	28892	105
trnD-GUC	gene	translation-rna	−	29410	29484	74
trnY-GUA	gene	translation-rna	−	29594	29678	84
trnE-UUC	gene	translation-rna	−	29753	29826	73
trnT-GGU	gene	translation-rna	+	30396	30468	72
psbD	gene	photosystem-ii	+	31824	32886	1062
psbC	gene	photosystem-ii	+	32833	34255	1422
trnS-UGA	gene	translation-rna	−	34500	34593	93
psbZ	gene	photosystem-ii	+	34928	35117	189
trnG-GCC	gene	translation-rna	+	35393	35464	71
trnfM-CAU	gene	translation-rna	−	35641	35715	74
rps14	gene	ribosomal-protein	−	35859	36162	303
psaB	gene	photosystem-i	−	36283	38488	2205
psaA	gene	photosystem-i	−	38513	40766	2253
ycf3	gene	other	−	41562	43522	1960
trnS-GGA	gene	translation-rna	+	44346	44433	87
rps4	gene	ribosomal-protein	−	44700	45306	606
trnT-UGU	gene	translation-rna	−	45657	45730	73
trnL-UAA	gene	translation-rna	+	46422	47000	578
trnF-GAA	gene	translation-rna	+	47292	47365	73
ndhJ	gene	nad-dehydrogenase	−	48004	48481	477
ndhK	gene	nad-dehydrogenase	−	48591	49269	678
ndhC	gene	nad-dehydrogenase	−	49320	49683	363
trnV-UAC	gene	translation-rna	−	50631	51277	646
trnM-CAU	gene	translation-rna	+	51457	51530	73
atpE	gene	atp-synthase	−	51740	52142	402
atpB	gene	atp-synthase	−	52138	53635	1497
rbcL	gene	other	+	54412	55867	1455
accD	gene	other	+	56564	58046	1482
psaI	gene	photosystem-i	+	58513	58624	111
ycf4	gene	other	+	59073	59628	555
cemA	gene	other	+	60290	60980	690
petA	gene	cytochrome	+	61187	62150	963
psbJ	gene	photosystem-ii	−	63189	63312	123
psbL	gene	photosystem-ii	−	63441	63558	117
psbF	gene	photosystem-ii	−	63581	63701	120
psbE	gene	photosystem-ii	−	63715	63967	252
petL	gene	cytochrome	+	64872	64968	96
petG	gene	cytochrome	+	65146	65260	114
trnW-CCA	gene	translation-rna	−	65374	65448	74
trnP-UGG	gene	translation-rna	−	65621	65695	74
psaJ	gene	photosystem-i	+	65973	66108	135
rpl33	gene	ribosomal-protein	+	66553	66754	201
rps18	gene	ribosomal-protein	+	66929	67235	306
rpl20	gene	ribosomal-protein	−	67469	67856	387
rps12	gene	ribosomal-protein	−	68657	96830	28173
rps12	gene	ribosomal-protein	+	68657	138154	69497
clpP	gene	other	−	68893	70785	1892
psbB	gene	photosystem-ii	+	71238	72765	1527
psbT	gene	photosystem-ii	+	72953	73061	108
psbN	gene	photosystem-ii	−	73121	73253	132
psbH	gene	photosystem-ii	+	73295	73580	285
petB	gene	cytochrome	+	73705	75079	1374
petD	gene	cytochrome	+	75280	76467	1187
rpoA	gene	rna-polymerase	−	76650	77658	1008
rps11	gene	ribosomal-protein	−	77728	78145	417
rpl36	gene	ribosomal-protein	−	78254	78368	114
infA	gene	other	−	78463	78697	234
rps8	gene	ribosomal-protein	−	78817	79222	405
rpl14	gene	ribosomal-protein	−	79402	79771	369
rpl16	gene	ribosomal-protein	−	79899	81169	1270
rps3	gene	ribosomal-protein	−	81322	81985	663
rpl22	gene	ribosomal-protein	−	81969	82437	468
rps19	gene	ribosomal-protein	−	82506	82785	279
rpl2	gene	ribosomal-protein	−	82847	84335	1488
rpl23	gene	ribosomal-protein	−	84353	84635	282
trnI-CAU	gene	translation-rna	−	84800	84874	74
ycf2	gene	other	+	84962	91802	6840
ycf15	gene	other	+	91892	92141	249
trnL-CAA	gene	translation-rna	−	92401	92482	81
ndhB	gene	nad-dehydrogenase	−	93033	95241	2208
rps7	gene	ribosomal-protein	−	95515	95983	468
trnV-GAC	gene	translation-rna	+	98455	98527	72
rrn16	gene	ribosomal-rna	+	98753	100244	1491
trnI-GAU	gene	translation-rna	+	100542	101562	1020
trnA-UGC	gene	translation-rna	+	101634	102519	885
rrn23	gene	ribosomal-rna	+	102679	105488	2809
rrn4.5	gene	ribosomal-rna	+	105588	105691	103
rrn5	gene	ribosomal-rna	+	105940	106061	121
trnR-ACG	gene	translation-rna	+	106310	106384	74
trnN-GUU	gene	translation-rna	−	106902	106974	72
ycf1	gene	other	+	107303	108461	1158
ndhF	gene	nad-dehydrogenase	−	108327	110559	2232
rpl32	gene	ribosomal-protein	+	110988	111186	198
trnL-UAG	gene	translation-rna	+	111909	111989	80
ccsA	gene	other	+	112038	113058	1020
ndhD	gene	nad-dehydrogenase	−	113287	114829	1542
psaC	gene	photosystem-i	−	114925	115171	246
ndhE	gene	nad-dehydrogenase	−	115421	115724	303
ndhG	gene	nad-dehydrogenase	−	115873	116404	531
ndhI	gene	nad-dehydrogenase	−	116782	117289	507
ndhA	gene	nad-dehydrogenase	−	117369	119467	2098
ndhH	gene	nad-dehydrogenase	−	119468	120650	1182
rps15	gene	ribosomal-protein	−	120749	121022	273
ycf1	gene	other	−	121424	126998	5574
trnN-GUU	gene	translation-rna	+	127216	127288	72
trnR-ACG	gene	translation-rna	−	127806	127880	74
rrn5	gene	ribosomal-rna	−	128129	128250	121
rrn4.5	gene	ribosomal-rna	−	128499	128602	103
rrn23	gene	ribosomal-rna	−	128702	131511	2809
trnA-UGC	gene	translation-rna	−	131671	132556	885
trnI-GAU	gene	translation-rna	−	132628	133648	1020
rrn16	gene	ribosomal-rna	−	133946	135437	1491
trnV-GAC	gene	translation-rna	−	135663	135735	72
rps7	gene	ribosomal-protein	+	138207	138675	468
ndhB	gene	nad-dehydrogenase	+	138949	141157	2208
trnL-CAA	gene	translation-rna	+	141708	141789	81
ycf15	gene	other	−	142049	142313	264
ycf2	gene	other	−	142388	149228	6840
trnI-CAU	gene	translation-rna	+	149316	149390	74
rpl23	gene	ribosomal-protein	+	149555	149837	282
rpl2	gene	ribosomal-protein	+	149855	151343	1488
rps19	gene	ribosomal-protein	+	151405	151450	45

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_050898.1DNA · accDNC_050898DNA · atpBNC_050898DNA · matKNC_050898DNA · ndhFNC_050898DNA · psbANC_050898DNA · rbcLNC_050898DNA · rps12NC_050898DNA · ycf1NC_050898