Coordinate-aware organelle record

Salvia nipponica chloroplast genome

Available MT156377.1 151,484 bp 134 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

134 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	10	84	74
psbA	gene	photosystem-ii	−	392	1451	1059
trnK-UUU	gene	translation-rna	−	1682	4275	2593
matK	gene	other	−	1981	3544	1563
rps16	gene	ribosomal-protein	−	4840	5950	1110
trnQ-UUG	gene	translation-rna	−	6921	6993	72
psbK	gene	photosystem-ii	+	7379	7559	180
psbI	gene	photosystem-ii	+	7955	8066	111
trnS-GCU	gene	translation-rna	−	8227	8315	88
trnG-UCC	gene	translation-rna	+	8994	9747	753
trnR-UCU	gene	translation-rna	+	9928	10000	72
atpA	gene	atp-synthase	−	10106	11630	1524
atpF	gene	atp-synthase	−	11745	12978	1233
atpH	gene	atp-synthase	−	13243	13489	246
atpI	gene	atp-synthase	−	14468	15212	744
rps2	gene	ribosomal-protein	−	15436	16147	711
rpoC2	gene	rna-polymerase	−	16356	20544	4188
rpoC1	gene	rna-polymerase	−	20701	23543	2842
rpoB	gene	rna-polymerase	−	23548	26761	3213
trnC-GCA	gene	translation-rna	+	27912	27983	71
petN	gene	cytochrome	+	28146	28236	90
psbM	gene	photosystem-ii	−	29203	29308	105
trnD-GUC	gene	translation-rna	−	29836	29910	74
trnY-GUA	gene	translation-rna	−	30020	30104	84
trnE-UUC	gene	translation-rna	−	30175	30248	73
trnT-GGU	gene	translation-rna	+	30784	30856	72
psbD	gene	photosystem-ii	+	32228	33290	1062
psbC	gene	photosystem-ii	+	33237	34659	1422
trnS-UGA	gene	translation-rna	−	34904	34997	93
psbZ	gene	photosystem-ii	+	35331	35520	189
trnG-GCC	gene	translation-rna	+	35791	35862	71
trnfM-CAU	gene	translation-rna	−	36035	36109	74
rps14	gene	ribosomal-protein	−	36253	36556	303
psaB	gene	photosystem-i	−	36679	38884	2205
psaA	gene	photosystem-i	−	38909	41162	2253
ycf3	gene	other	−	41896	43841	1945
trnS-GGA	gene	translation-rna	+	44665	44752	87
rps4	gene	ribosomal-protein	−	45028	45634	606
trnT-UGU	gene	translation-rna	−	46007	46080	73
trnL-UAA	gene	translation-rna	+	46759	47299	540
trnF-GAA	gene	translation-rna	+	47597	47670	73
ndhJ	gene	nad-dehydrogenase	−	48203	48680	477
ndhK	gene	nad-dehydrogenase	−	48790	49468	678
ndhC	gene	nad-dehydrogenase	−	49519	49882	363
trnV-UAC	gene	translation-rna	−	50830	51479	649
trnM-CAU	gene	translation-rna	+	51667	51740	73
atpE	gene	atp-synthase	−	51951	52353	402
atpB	gene	atp-synthase	−	52349	53846	1497
rbcL	gene	other	+	54630	56070	1440
accD	gene	other	+	56797	58243	1446
psaI	gene	photosystem-i	+	58712	58823	111
ycf4	gene	other	+	59268	59823	555
cemA	gene	other	+	60433	61123	690
petA	gene	cytochrome	+	61343	62306	963
psbJ	gene	photosystem-ii	−	63337	63460	123
psbL	gene	photosystem-ii	−	63589	63706	117
psbF	gene	photosystem-ii	−	63729	63849	120
psbE	gene	photosystem-ii	−	63863	64115	252
petL	gene	cytochrome	+	64896	64992	96
petG	gene	cytochrome	+	65139	65253	114
trnW-CCA	gene	translation-rna	−	65367	65441	74
trnP-UGG	gene	translation-rna	−	65619	65693	74
psaJ	gene	photosystem-i	+	65983	66118	135
rpl33	gene	ribosomal-protein	+	66568	66769	201
rps18	gene	ribosomal-protein	+	66934	67240	306
rpl20	gene	ribosomal-protein	−	67471	67858	387
rps12	gene	ribosomal-protein	−	68667	96801	28134
rps12	gene	ribosomal-protein	+	68667	138214	69547
clpP	gene	other	−	68905	70825	1920
psbB	gene	photosystem-ii	+	71267	72794	1527
psbT	gene	photosystem-ii	+	72977	73085	108
psbN	gene	photosystem-ii	−	73145	73277	132
psbH	gene	photosystem-ii	+	73382	73604	222
petB	gene	cytochrome	+	73729	75087	1358
petD	gene	cytochrome	+	75280	76477	1197
rpoA	gene	rna-polymerase	−	76653	77661	1008
rps11	gene	ribosomal-protein	−	77732	78149	417
rpl36	gene	ribosomal-protein	−	78258	78372	114
infA	gene	other	−	78467	78701	234
rps8	gene	ribosomal-protein	−	78827	79232	405
rpl14	gene	ribosomal-protein	−	79414	79783	369
rpl16	gene	ribosomal-protein	−	79914	81192	1278
rps3	gene	ribosomal-protein	−	81327	81990	663
rpl22	gene	ribosomal-protein	−	81974	82442	468
rps19	gene	ribosomal-protein	−	82511	82790	279
rpl2	gene	ribosomal-protein	−	82849	84332	1483
rpl23	gene	ribosomal-protein	−	84350	84632	282
trnI-CAU	gene	translation-rna	−	84797	84871	74
ycf2	gene	other	+	84959	91775	6816
ycf15	gene	other	+	91865	92114	249
trnL-CAA	gene	translation-rna	−	92374	92455	81
ndhB	gene	nad-dehydrogenase	−	93014	95168	2154
rps7	gene	ribosomal-protein	−	95496	95964	468
trnV-GAC	gene	translation-rna	+	98415	98487	72
rrn16	gene	ribosomal-rna	+	98713	100204	1491
trnI-GAU	gene	translation-rna	+	100502	101515	1013
trnA-UGC	gene	translation-rna	+	101579	102456	877
rrn23	gene	ribosomal-rna	+	102621	105432	2811
rrn4.5	gene	ribosomal-rna	+	105530	105633	103
rrn5	gene	ribosomal-rna	+	105888	106009	121
trnR-ACG	gene	translation-rna	+	106252	106326	74
trnN-GUU	gene	translation-rna	−	106845	106917	72
ycf1	gene	other	+	107246	108302	1056
ndhF	gene	nad-dehydrogenase	−	108270	110493	2223
rpl32	gene	ribosomal-protein	+	110949	111120	171
trnL-UAG	gene	translation-rna	+	111837	111917	80
ccsA	gene	other	+	112009	112987	978
ndhD	gene	nad-dehydrogenase	−	113226	114768	1542
psaC	gene	photosystem-i	−	114866	115112	246
ndhE	gene	nad-dehydrogenase	−	115362	115668	306
ndhG	gene	nad-dehydrogenase	−	115888	116419	531
ndhI	gene	nad-dehydrogenase	−	116802	117309	507
ndhA	gene	nad-dehydrogenase	−	117389	119488	2099
ndhH	gene	nad-dehydrogenase	−	119489	120671	1182
rps15	gene	ribosomal-protein	−	120770	121043	273
ycf1	gene	other	−	121450	126985	5535
trnN-GUU	gene	translation-rna	+	127314	127386	72
trnR-ACG	gene	translation-rna	−	127905	127979	74
rrn5	gene	ribosomal-rna	−	128222	128343	121
rrn4.5	gene	ribosomal-rna	−	128598	128701	103
rrn23	gene	ribosomal-rna	−	128799	131610	2811
trnA-UGC	gene	translation-rna	−	131775	132652	877
trnI-GAU	gene	translation-rna	−	132716	133729	1013
rrn16	gene	ribosomal-rna	−	134027	135518	1491
trnV-GAC	gene	translation-rna	−	135744	135816	72
rps7	gene	ribosomal-protein	+	138267	138735	468
ndhB	gene	nad-dehydrogenase	+	139063	141217	2154
trnL-CAA	gene	translation-rna	+	141776	141857	81
ycf15	gene	other	−	142117	142366	249
ycf2	gene	other	−	142456	149272	6816
trnI-CAU	gene	translation-rna	+	149360	149434	74
rpl23	gene	ribosomal-protein	+	149599	149881	282
rpl2	gene	ribosomal-protein	+	149899	151382	1483
rps19	gene	ribosomal-protein	+	151441	151484	43

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeMT156377.1DNA · accDMT156377DNA · atpBMT156377DNA · matKMT156377DNA · ndhFMT156377DNA · psbAMT156377DNA · rbcLMT156377DNA · rps12MT156377DNA · ycf1MT156377