Salvia nubicola chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
LSC
IR
SSC
IR
trnH-GUG · NC_067737.1 · 12–85 bp · −
psbA · NC_067737.1 · 394–1,452 bp · −
trnK-UUU · NC_067737.1 · 1,684–4,272 bp · −
matK · NC_067737.1 · 1,983–3,545 bp · −
rps16 · NC_067737.1 · 4,838–5,947 bp · −
trnQ-UUG · NC_067737.1 · 6,919–6,990 bp · −
trnS-GCU · NC_067737.1 · 8,233–8,320 bp · −
atpA · NC_067737.1 · 10,117–11,640 bp · −
atpF · NC_067737.1 · 11,734–12,978 bp · −
atpH · NC_067737.1 · 13,244–13,489 bp · −
atpI · NC_067737.1 · 14,457–15,200 bp · −
rps2 · NC_067737.1 · 15,425–16,135 bp · −
rpoC2 · NC_067737.1 · 16,344–20,531 bp · −
rpoC1 · NC_067737.1 · 20,689–23,509 bp · −
rpoB · NC_067737.1 · 23,536–26,748 bp · −
psbM · NC_067737.1 · 29,192–29,296 bp · −
trnD-GUC · NC_067737.1 · 29,822–29,895 bp · −
trnY-GUA · NC_067737.1 · 30,006–30,089 bp · −
trnE-UUC · NC_067737.1 · 30,163–30,235 bp · −
trnS-UGA · NC_067737.1 · 34,894–34,986 bp · −
trnfM-CAU · NC_067737.1 · 36,025–36,098 bp · −
rps14 · NC_067737.1 · 36,243–36,545 bp · −
psaB · NC_067737.1 · 36,668–38,872 bp · −
psaA · NC_067737.1 · 38,898–41,150 bp · −
ycf3 · NC_067737.1 · 41,925–43,867 bp · −
rps4 · NC_067737.1 · 45,055–45,660 bp · −
trnT-UGU · NC_067737.1 · 46,029–46,101 bp · −
ndhJ · NC_067737.1 · 48,225–48,701 bp · −
ndhK · NC_067737.1 · 48,812–49,489 bp · −
ndhC · NC_067737.1 · 49,541–49,903 bp · −
trnV-UAC · NC_067737.1 · 50,854–51,502 bp · −
atpE · NC_067737.1 · 51,974–52,375 bp · −
atpB · NC_067737.1 · 52,372–53,868 bp · −
psbJ · NC_067737.1 · 63,367–63,489 bp · −
psbL · NC_067737.1 · 63,619–63,735 bp · −
psbF · NC_067737.1 · 63,759–63,878 bp · −
psbE · NC_067737.1 · 63,893–64,144 bp · −
trnW-CCA · NC_067737.1 · 65,422–65,495 bp · −
trnP-UGG · NC_067737.1 · 65,674–65,747 bp · −
rpl20 · NC_067737.1 · 67,541–67,927 bp · −
rps12 · NC_067737.1 · 68,735–68,848 bp · −
rps12 · NC_067737.1 · 96,115–96,908 bp · −
clpP · NC_067737.1 · 68,973–70,893 bp · −
psbN · NC_067737.1 · 73,215–73,346 bp · −
rpoA · NC_067737.1 · 76,723–77,730 bp · −
rps11 · NC_067737.1 · 77,802–78,218 bp · −
rpl36 · NC_067737.1 · 78,328–78,441 bp · −
infA · NC_067737.1 · 78,537–78,770 bp · −
rps8 · NC_067737.1 · 78,897–79,301 bp · −
rpl14 · NC_067737.1 · 79,484–79,852 bp · −
rpl16 · NC_067737.1 · 79,984–81,262 bp · −
rps3 · NC_067737.1 · 81,398–82,060 bp · −
rpl22 · NC_067737.1 · 82,045–82,512 bp · −
rps19 · NC_067737.1 · 82,582–82,860 bp · −
rpl2 · NC_067737.1 · 82,920–84,402 bp · −
rpl23 · NC_067737.1 · 84,421–84,702 bp · −
trnI-CAU · NC_067737.1 · 84,868–84,941 bp · −
trnL-CAA · NC_067737.1 · 92,472–92,552 bp · −
ndhB · NC_067737.1 · 93,112–95,265 bp · −
rps7 · NC_067737.1 · 95,594–96,061 bp · −
trnN-GUU · NC_067737.1 · 106,958–107,029 bp · −
ndhF · NC_067737.1 · 108,383–110,617 bp · −
ndhD · NC_067737.1 · 113,321–114,862 bp · −
psaC · NC_067737.1 · 114,957–115,202 bp · −
ndhE · NC_067737.1 · 115,453–115,755 bp · −
ndhG · NC_067737.1 · 115,979–116,509 bp · −
ndhI · NC_067737.1 · 116,899–117,405 bp · −
ndhA · NC_067737.1 · 117,486–119,586 bp · −
ndhH · NC_067737.1 · 119,588–120,823 bp · −
rps15 · NC_067737.1 · 120,869–121,141 bp · −
ycf1 · NC_067737.1 · 121,558–127,203 bp · −
trnR-ACG · NC_067737.1 · 128,018–128,091 bp · −
rrn5 · NC_067737.1 · 128,335–128,455 bp · −
rrn4.5 · NC_067737.1 · 128,711–128,813 bp · −
rrn23 · NC_067737.1 · 128,914–131,722 bp · −
trnA-UGC · NC_067737.1 · 131,888–132,764 bp · −
trnI-GAU · NC_067737.1 · 132,829–133,841 bp · −
rrn16 · NC_067737.1 · 134,140–135,630 bp · −
trnV-GAC · NC_067737.1 · 135,857–135,928 bp · −
ycf15 · NC_067737.1 · 142,240–142,488 bp · −
ycf2 · NC_067737.1 · 142,579–149,421 bp · −
psbK · NC_067737.1 · 7,377–7,556 bp · +
psbI · NC_067737.1 · 7,953–8,063 bp · +
trnG-UCC · NC_067737.1 · 9,005–9,757 bp · +
trnR-UCU · NC_067737.1 · 9,939–10,010 bp · +
trnC-GCA · NC_067737.1 · 27,901–27,971 bp · +
petN · NC_067737.1 · 28,135–28,224 bp · +
trnT-GGU · NC_067737.1 · 30,772–30,843 bp · +
psbD · NC_067737.1 · 32,217–33,278 bp · +
psbC · NC_067737.1 · 33,226–34,647 bp · +
psbZ · NC_067737.1 · 35,321–35,509 bp · +
trnG-GCC · NC_067737.1 · 35,782–35,852 bp · +
trnS-GGA · NC_067737.1 · 44,692–44,778 bp · +
trnL-UAA · NC_067737.1 · 46,781–47,320 bp · +
trnF-GAA · NC_067737.1 · 47,619–47,691 bp · +
trnM-CAU · NC_067737.1 · 51,691–51,763 bp · +
rbcL · NC_067737.1 · 54,632–56,092 bp · +
accD · NC_067737.1 · 56,806–58,263 bp · +
psaI · NC_067737.1 · 58,728–58,838 bp · +
ycf4 · NC_067737.1 · 59,285–59,839 bp · +
cemA · NC_067737.1 · 60,452–61,141 bp · +
petA · NC_067737.1 · 61,362–62,324 bp · +
petL · NC_067737.1 · 64,951–65,046 bp · +
petG · NC_067737.1 · 65,194–65,307 bp · +
psaJ · NC_067737.1 · 66,038–66,172 bp · +
rpl33 · NC_067737.1 · 66,623–66,823 bp · +
rps18 · NC_067737.1 · 67,005–67,310 bp · +
rps12 · NC_067737.1 · 137,543–138,336 bp · +
psbB · NC_067737.1 · 71,336–72,862 bp · +
psbT · NC_067737.1 · 73,047–73,154 bp · +
psbH · NC_067737.1 · 73,452–73,673 bp · +
petB · NC_067737.1 · 73,799–75,156 bp · +
petD · NC_067737.1 · 75,350–76,546 bp · +
ycf2 · NC_067737.1 · 85,030–91,872 bp · +
ycf15 · NC_067737.1 · 91,963–92,211 bp · +
trnV-GAC · NC_067737.1 · 98,523–98,594 bp · +
rrn16 · NC_067737.1 · 98,821–100,311 bp · +
trnI-GAU · NC_067737.1 · 100,610–101,622 bp · +
trnA-UGC · NC_067737.1 · 101,687–102,563 bp · +
rrn23 · NC_067737.1 · 102,729–105,537 bp · +
rrn4.5 · NC_067737.1 · 105,638–105,740 bp · +
rrn5 · NC_067737.1 · 105,996–106,116 bp · +
trnR-ACG · NC_067737.1 · 106,360–106,433 bp · +
ycf1 · NC_067737.1 · 107,248–108,414 bp · +
rpl32 · NC_067737.1 · 111,050–111,220 bp · +
trnL-UAG · NC_067737.1 · 111,933–112,012 bp · +
ccsA · NC_067737.1 · 112,057–113,082 bp · +
trnN-GUU · NC_067737.1 · 127,422–127,493 bp · +
rps7 · NC_067737.1 · 138,390–138,857 bp · +
ndhB · NC_067737.1 · 139,186–141,339 bp · +
trnL-CAA · NC_067737.1 · 141,899–141,979 bp · +
trnI-CAU · NC_067737.1 · 149,510–149,583 bp · +
rpl23 · NC_067737.1 · 149,749–150,030 bp · +
rpl2 · NC_067737.1 · 150,049–151,531 bp · +
rps19 · NC_067737.1 · 151,591–151,632 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Salvia nubicola
ANNOTATED PLASTOME
NC_067737.1
151,632 bp · 134 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37908 75816 113724 151632 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG ycf1 rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2 rps19
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
135 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 12 85 74 Locate
psbA gene − 394 1452 1059 Locate
trnK-UUU gene − 1684 4272 2589 Locate
matK gene − 1983 3545 1563 Locate
rps16 gene − 4838 5947 1110 Locate
trnQ-UUG gene − 6919 6990 72 Locate
psbK gene + 7377 7556 180 Locate
psbI gene + 7953 8063 111 Locate
trnS-GCU gene − 8233 8320 88 Locate
trnG-UCC gene + 9005 9757 753 Locate
trnR-UCU gene + 9939 10010 72 Locate
atpA gene − 10117 11640 1524 Locate
atpF gene − 11734 12978 1245 Locate
atpH gene − 13244 13489 246 Locate
atpI gene − 14457 15200 744 Locate
rps2 gene − 15425 16135 711 Locate
rpoC2 gene − 16344 20531 4188 Locate
rpoC1 gene − 20689 23509 2821 Locate
rpoB gene − 23536 26748 3213 Locate
trnC-GCA gene + 27901 27971 71 Locate
petN gene + 28135 28224 90 Locate
psbM gene − 29192 29296 105 Locate
trnD-GUC gene − 29822 29895 74 Locate
trnY-GUA gene − 30006 30089 84 Locate
trnE-UUC gene − 30163 30235 73 Locate
trnT-GGU gene + 30772 30843 72 Locate
psbD gene + 32217 33278 1062 Locate
psbC gene + 33226 34647 1422 Locate
trnS-UGA gene − 34894 34986 93 Locate
psbZ gene + 35321 35509 189 Locate
trnG-GCC gene + 35782 35852 71 Locate
trnfM-CAU gene − 36025 36098 74 Locate
rps14 gene − 36243 36545 303 Locate
psaB gene − 36668 38872 2205 Locate
psaA gene − 38898 41150 2253 Locate
ycf3 gene − 41925 43867 1943 Locate
trnS-GGA gene + 44692 44778 87 Locate
rps4 gene − 45055 45660 606 Locate
trnT-UGU gene − 46029 46101 73 Locate
trnL-UAA gene + 46781 47320 540 Locate
trnF-GAA gene + 47619 47691 73 Locate
ndhJ gene − 48225 48701 477 Locate
ndhK gene − 48812 49489 678 Locate
ndhC gene − 49541 49903 363 Locate
trnV-UAC gene − 50854 51502 649 Locate
trnM-CAU gene + 51691 51763 73 Locate
atpE gene − 51974 52375 402 Locate
atpB gene − 52372 53868 1497 Locate
rbcL gene + 54632 56092 1461 Locate
accD gene + 56806 58263 1458 Locate
psaI gene + 58728 58838 111 Locate
ycf4 gene + 59285 59839 555 Locate
cemA gene + 60452 61141 690 Locate
petA gene + 61362 62324 963 Locate
psbJ gene − 63367 63489 123 Locate
psbL gene − 63619 63735 117 Locate
psbF gene − 63759 63878 120 Locate
psbE gene − 63893 64144 252 Locate
petL gene + 64951 65046 96 Locate
petG gene + 65194 65307 114 Locate
trnW-CCA gene − 65422 65495 74 Locate
trnP-UGG gene − 65674 65747 74 Locate
psaJ gene + 66038 66172 135 Locate
rpl33 gene + 66623 66823 201 Locate
rps18 gene + 67005 67310 306 Locate
rpl20 gene − 67541 67927 387 Locate
rps12 gene − 68735 68848 114 Locate
clpP gene − 68973 70893 1921 Locate
psbB gene + 71336 72862 1527 Locate
psbT gene + 73047 73154 108 Locate
psbN gene − 73215 73346 132 Locate
psbH gene + 73452 73673 222 Locate
petB gene + 73799 75156 1358 Locate
petD gene + 75350 76546 1197 Locate
rpoA gene − 76723 77730 1008 Locate
rps11 gene − 77802 78218 417 Locate
rpl36 gene − 78328 78441 114 Locate
infA gene − 78537 78770 234 Locate
rps8 gene − 78897 79301 405 Locate
rpl14 gene − 79484 79852 369 Locate
rpl16 gene − 79984 81262 1279 Locate
rps3 gene − 81398 82060 663 Locate
rpl22 gene − 82045 82512 468 Locate
rps19 gene − 82582 82860 279 Locate
rpl2 gene − 82920 84402 1483 Locate
rpl23 gene − 84421 84702 282 Locate
trnI-CAU gene − 84868 84941 74 Locate
ycf2 gene + 85030 91872 6843 Locate
ycf15 gene + 91963 92211 249 Locate
trnL-CAA gene − 92472 92552 81 Locate
ndhB gene − 93112 95265 2154 Locate
rps7 gene − 95594 96061 468 Locate
rps12 gene − 96115 96908 794 Locate
trnV-GAC gene + 98523 98594 72 Locate
rrn16 gene + 98821 100311 1491 Locate
trnI-GAU gene + 100610 101622 1013 Locate
trnA-UGC gene + 101687 102563 877 Locate
rrn23 gene + 102729 105537 2809 Locate
rrn4.5 gene + 105638 105740 103 Locate
rrn5 gene + 105996 106116 121 Locate
trnR-ACG gene + 106360 106433 74 Locate
trnN-GUU gene − 106958 107029 72 Locate
ycf1 gene + 107248 108414 1167 Locate
ndhF gene − 108383 110617 2235 Locate
rpl32 gene + 111050 111220 171 Locate
trnL-UAG gene + 111933 112012 80 Locate
ccsA gene + 112057 113082 1026 Locate
ndhD gene − 113321 114862 1542 Locate
psaC gene − 114957 115202 246 Locate
ndhE gene − 115453 115755 303 Locate
ndhG gene − 115979 116509 531 Locate
ndhI gene − 116899 117405 507 Locate
ndhA gene − 117486 119586 2101 Locate
ndhH gene − 119588 120823 1236 Locate
rps15 gene − 120869 121141 273 Locate
ycf1 gene − 121558 127203 5646 Locate
trnN-GUU gene + 127422 127493 72 Locate
trnR-ACG gene − 128018 128091 74 Locate
rrn5 gene − 128335 128455 121 Locate
rrn4.5 gene − 128711 128813 103 Locate
rrn23 gene − 128914 131722 2809 Locate
trnA-UGC gene − 131888 132764 877 Locate
trnI-GAU gene − 132829 133841 1013 Locate
rrn16 gene − 134140 135630 1491 Locate
trnV-GAC gene − 135857 135928 72 Locate
rps12 gene + 137543 138336 794 Locate
rps7 gene + 138390 138857 468 Locate
ndhB gene + 139186 141339 2154 Locate
trnL-CAA gene + 141899 141979 81 Locate
ycf15 gene − 142240 142488 249 Locate
ycf2 gene − 142579 149421 6843 Locate
trnI-CAU gene + 149510 149583 74 Locate
rpl23 gene + 149749 150030 282 Locate
rpl2 gene + 150049 151531 1483 Locate
rps19 gene + 151591 151632 42 Locate
Status Available
Accession NC_067737.1
Length 151,632 bp
GC content 38.0%
Annotated genes 134
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 15 Ribosomal Protein 27 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources