Coordinate-aware organelle record

Salvia oxyphora chloroplast genome

Available MT156374.1 151,014 bp 134 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

134 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	1	75	74
psbA	gene	photosystem-ii	−	414	1473	1059
trnK-UUU	gene	translation-rna	−	1704	4270	2566
matK	gene	other	−	2008	3532	1524
rps16	gene	ribosomal-protein	−	4840	5939	1099
trnQ-UUG	gene	translation-rna	−	6713	6785	72
psbK	gene	photosystem-ii	+	7174	7360	186
psbI	gene	photosystem-ii	+	7754	7865	111
trnS-GCU	gene	translation-rna	−	8014	8102	88
trnG-UCC	gene	translation-rna	+	8802	9564	762
trnR-UCU	gene	translation-rna	+	9740	9812	72
atpA	gene	atp-synthase	−	9922	11446	1524
atpF	gene	atp-synthase	−	11543	12803	1260
atpH	gene	atp-synthase	−	13076	13322	246
atpI	gene	atp-synthase	−	14333	15077	744
rps2	gene	ribosomal-protein	−	15300	16011	711
rpoC2	gene	rna-polymerase	−	16212	20400	4188
rpoC1	gene	rna-polymerase	−	20566	23399	2833
rpoB	gene	rna-polymerase	−	23404	26617	3213
trnC-GCA	gene	translation-rna	+	27779	27850	71
petN	gene	cytochrome	+	28005	28095	90
psbM	gene	photosystem-ii	−	29077	29182	105
trnD-GUC	gene	translation-rna	−	29552	29626	74
trnY-GUA	gene	translation-rna	−	29738	29822	84
trnE-UUC	gene	translation-rna	−	29891	29964	73
trnT-GGU	gene	translation-rna	+	30505	30577	72
psbD	gene	photosystem-ii	+	31949	33011	1062
psbC	gene	photosystem-ii	+	32958	34380	1422
trnS-UGA	gene	translation-rna	−	34618	34711	93
psbZ	gene	photosystem-ii	+	35038	35227	189
trnG-GCC	gene	translation-rna	+	35504	35575	71
trnfM-CAU	gene	translation-rna	−	35731	35805	74
rps14	gene	ribosomal-protein	−	35949	36252	303
psaB	gene	photosystem-i	−	36374	38579	2205
psaA	gene	photosystem-i	−	38604	40857	2253
ycf3	gene	other	−	41587	43520	1933
trnS-GGA	gene	translation-rna	+	44345	44432	87
rps4	gene	ribosomal-protein	−	44709	45315	606
trnT-UGU	gene	translation-rna	−	45675	45748	73
trnL-UAA	gene	translation-rna	+	46408	46983	575
trnF-GAA	gene	translation-rna	+	47270	47343	73
ndhJ	gene	nad-dehydrogenase	−	47819	48296	477
ndhK	gene	nad-dehydrogenase	−	48406	49084	678
ndhC	gene	nad-dehydrogenase	−	49135	49498	363
trnV-UAC	gene	translation-rna	−	50302	50948	646
trnM-CAU	gene	translation-rna	+	51128	51201	73
atpE	gene	atp-synthase	−	51390	51792	402
atpB	gene	atp-synthase	−	51788	53285	1497
rbcL	gene	other	+	54086	55520	1434
accD	gene	other	+	56191	57661	1470
psaI	gene	photosystem-i	+	58124	58235	111
ycf4	gene	other	+	58679	59234	555
cemA	gene	other	+	59875	60565	690
petA	gene	cytochrome	+	60786	61749	963
psbJ	gene	photosystem-ii	−	62756	62879	123
psbL	gene	photosystem-ii	−	63008	63125	117
psbF	gene	photosystem-ii	−	63148	63268	120
psbE	gene	photosystem-ii	−	63282	63534	252
petL	gene	cytochrome	+	64433	64529	96
petG	gene	cytochrome	+	64707	64821	114
trnW-CCA	gene	translation-rna	−	64935	65009	74
trnP-UGG	gene	translation-rna	−	65183	65257	74
psaJ	gene	photosystem-i	+	65533	65668	135
rpl33	gene	ribosomal-protein	+	66106	66307	201
rps18	gene	ribosomal-protein	+	66479	66785	306
rpl20	gene	ribosomal-protein	−	67020	67407	387
rps12	gene	ribosomal-protein	−	68214	96372	28158
rps12	gene	ribosomal-protein	+	68214	137729	69515
clpP	gene	other	−	68451	70361	1910
psbB	gene	photosystem-ii	+	70805	72332	1527
psbT	gene	photosystem-ii	+	72522	72624	102
psbN	gene	photosystem-ii	−	72689	72821	132
psbH	gene	photosystem-ii	+	72926	73148	222
petB	gene	cytochrome	+	73281	74645	1364
petD	gene	cytochrome	+	74832	76016	1184
rpoA	gene	rna-polymerase	−	76192	77200	1008
rps11	gene	ribosomal-protein	−	77269	77686	417
rpl36	gene	ribosomal-protein	−	77797	77911	114
infA	gene	other	−	78006	78240	234
rps8	gene	ribosomal-protein	−	78361	78766	405
rpl14	gene	ribosomal-protein	−	78937	79306	369
rpl16	gene	ribosomal-protein	−	79436	80712	1276
rps3	gene	ribosomal-protein	−	80854	81517	663
rpl22	gene	ribosomal-protein	−	81501	81969	468
rps19	gene	ribosomal-protein	−	82038	82317	279
rpl2	gene	ribosomal-protein	−	82377	83869	1492
rpl23	gene	ribosomal-protein	−	83887	84169	282
trnI-CAU	gene	translation-rna	−	84334	84408	74
ycf2	gene	other	+	84496	91336	6840
ycf15	gene	other	+	91426	91675	249
trnL-CAA	gene	translation-rna	−	91935	92016	81
ndhB	gene	nad-dehydrogenase	−	92575	94729	2154
rps7	gene	ribosomal-protein	−	95057	95525	468
trnV-GAC	gene	translation-rna	+	98022	98094	72
rrn16	gene	ribosomal-rna	+	98320	99811	1491
trnI-GAU	gene	translation-rna	+	100109	101128	1019
trnA-UGC	gene	translation-rna	+	101192	102069	877
rrn23	gene	ribosomal-rna	+	102234	105045	2811
rrn4.5	gene	ribosomal-rna	+	105143	105246	103
rrn5	gene	ribosomal-rna	+	105501	105622	121
trnR-ACG	gene	translation-rna	+	105865	105939	74
trnN-GUU	gene	translation-rna	−	106437	106509	72
ycf1	gene	other	+	106838	107888	1050
ndhF	gene	nad-dehydrogenase	−	107856	110088	2232
rpl32	gene	ribosomal-protein	+	110545	110716	171
trnL-UAG	gene	translation-rna	+	111362	111442	80
ccsA	gene	other	+	111538	112516	978
ndhD	gene	nad-dehydrogenase	−	112754	114296	1542
psaC	gene	photosystem-i	−	114390	114636	246
ndhE	gene	nad-dehydrogenase	−	114886	115192	306
ndhG	gene	nad-dehydrogenase	−	115404	115935	531
ndhI	gene	nad-dehydrogenase	−	116300	116807	507
ndhA	gene	nad-dehydrogenase	−	116887	118989	2102
ndhH	gene	nad-dehydrogenase	−	118990	120172	1182
rps15	gene	ribosomal-protein	−	120271	120544	273
ycf1	gene	other	−	120949	126469	5520
trnN-GUU	gene	translation-rna	+	126798	126870	72
trnR-ACG	gene	translation-rna	−	127368	127442	74
rrn5	gene	ribosomal-rna	−	127685	127806	121
rrn4.5	gene	ribosomal-rna	−	128061	128164	103
rrn23	gene	ribosomal-rna	−	128262	131073	2811
trnA-UGC	gene	translation-rna	−	131238	132115	877
trnI-GAU	gene	translation-rna	−	132179	133198	1019
rrn16	gene	ribosomal-rna	−	133496	134987	1491
trnV-GAC	gene	translation-rna	−	135213	135285	72
rps7	gene	ribosomal-protein	+	137782	138250	468
ndhB	gene	nad-dehydrogenase	+	138578	140732	2154
trnL-CAA	gene	translation-rna	+	141291	141372	81
ycf15	gene	other	−	141632	141881	249
ycf2	gene	other	−	141971	148811	6840
trnI-CAU	gene	translation-rna	+	148899	148973	74
rpl23	gene	ribosomal-protein	+	149138	149420	282
rpl2	gene	ribosomal-protein	+	149438	150930	1492
rps19	gene	ribosomal-protein	+	150990	151014	24

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeMT156374.1DNA · accDMT156374DNA · atpBMT156374DNA · matKMT156374DNA · ndhFMT156374DNA · psbAMT156374DNA · rbcLMT156374DNA · rps12MT156374DNA · ycf1MT156374