Coordinate-aware organelle record

Salvia petrophila chloroplast genome

Available NC_050899.1 151,688 bp 133 coordinate-linked features
LSCIRSSCIR0 kb13 kb26 kb39 kb52 kb65 kb78 kb91 kb104 kb117 kb130 kb143 kbtrnH-GUG · gene · 11-84 bp · − strandpsbA · gene · 399-1,457 bp · − strandtrnK-UUU · gene · 1,689-4,268 bp · − strandmatK · gene · 2,013-3,536 bp · − strandrps16 · gene · 4,837-5,954 bp · − strandtrnQ-UUG · gene · 6,850-6,921 bp · − strandpsbK · gene · 7,313-7,501 bp · + strandpsbI · gene · 7,899-8,009 bp · + strandtrnS-GCU · gene · 8,165-8,252 bp · − strandtrnG-UCC · gene · 8,947-9,700 bp · + strandtrnR-UCU · gene · 9,882-9,953 bp · + strandatpA · gene · 10,060-11,583 bp · − strandatpF · gene · 11,677-12,924 bp · − strandatpH · gene · 13,191-13,436 bp · − strandatpI · gene · 14,434-15,177 bp · − strandrps2 · gene · 15,402-16,112 bp · − strandrpoC2 · gene · 16,320-20,507 bp · − strandrpoC1 · gene · 20,672-23,492 bp · − strandrpoB · gene · 23,519-26,731 bp · − strandtrnC-GCA · gene · 27,876-27,946 bp · + strandpetN · gene · 28,110-28,199 bp · + strandpsbM · gene · 29,184-29,288 bp · − strandtrnD-GUC · gene · 29,783-29,856 bp · − strandtrnY-GUA · gene · 29,960-30,043 bp · − strandtrnE-UUC · gene · 30,115-30,187 bp · − strandtrnT-GGU · gene · 30,744-30,815 bp · + strandpsbD · gene · 32,189-33,250 bp · + strandpsbC · gene · 33,198-34,619 bp · + strandtrnS-UGA · gene · 34,865-34,957 bp · − strandpsbZ · gene · 35,217-35,480 bp · + strandtrnG-GCC · gene · 35,752-35,822 bp · + strandtrnfM-CAU · gene · 36,000-36,073 bp · − strandrps14 · gene · 36,218-36,520 bp · − strandpsaB · gene · 36,643-38,847 bp · − strandpsaA · gene · 38,873-41,125 bp · − strandycf3 · gene · 41,917-43,850 bp · − strandtrnS-GGA · gene · 44,667-44,753 bp · + strandrps4 · gene · 45,036-45,641 bp · − strandtrnT-UGU · gene · 45,990-46,062 bp · − strandtrnL-UAA · gene · 46,743-47,296 bp · + strandtrnF-GAA · gene · 47,602-47,674 bp · + strandndhJ · gene · 48,218-48,712 bp · − strandndhK · gene · 48,868-49,482 bp · − strandndhC · gene · 49,534-49,896 bp · − strandtrnV-UAC · gene · 50,847-51,490 bp · − strandtrnM-CAU · gene · 51,671-51,743 bp · + strandatpE · gene · 51,954-52,355 bp · − strandatpB · gene · 52,352-53,848 bp · − strandrbcL · gene · 54,612-56,066 bp · + strandaccD · gene · 56,774-58,255 bp · + strandpsaI · gene · 58,726-58,836 bp · + strandycf4 · gene · 59,282-59,836 bp · + strandcemA · gene · 60,496-61,185 bp · + strandpetA · gene · 61,400-62,362 bp · + strandpsbJ · gene · 63,413-63,535 bp · − strandpsbL · gene · 63,670-63,786 bp · − strandpsbF · gene · 63,810-63,929 bp · − strandpsbE · gene · 63,944-64,195 bp · − strandpetL · gene · 65,028-65,123 bp · + strandpetG · gene · 65,302-65,415 bp · + strandtrnW-CCA · gene · 65,530-65,603 bp · − strandtrnP-UGG · gene · 65,778-65,851 bp · − strandpsaJ · gene · 66,100-66,273 bp · + strandrpl33 · gene · 66,723-66,923 bp · + strandrps18 · gene · 67,094-67,399 bp · + strandrpl20 · gene · 67,633-68,019 bp · − strandrps12 · gene · 68,816-96,969 bp · − strandrps12 · gene · 68,816-138,386 bp · + strandclpP · gene · 69,054-70,957 bp · − strandpsbB · gene · 71,406-72,932 bp · + strandpsbT · gene · 73,118-73,225 bp · + strandpsbN · gene · 73,286-73,417 bp · − strandpsbH · gene · 73,505-73,744 bp · + strandpetB · gene · 73,870-75,229 bp · + strandpetD · gene · 75,417-76,613 bp · + strandrpoA · gene · 76,790-77,797 bp · − strandrps11 · gene · 77,869-78,285 bp · − strandrpl36 · gene · 78,395-78,508 bp · − strandinfA · gene · 78,604-78,837 bp · − strandrps8 · gene · 78,964-79,368 bp · − strandrpl14 · gene · 79,557-79,925 bp · − strandrpl16 · gene · 80,057-81,325 bp · − strandrps3 · gene · 81,461-82,123 bp · − strandrpl22 · gene · 82,108-82,575 bp · − strandrps19 · gene · 82,645-82,926 bp · − strandrpl2 · gene · 82,986-84,463 bp · − strandrpl23 · gene · 84,482-84,763 bp · − strandtrnI-CAU · gene · 84,929-85,002 bp · − strandycf2 · gene · 85,091-91,942 bp · + strandycf15 · gene · 92,018-92,281 bp · + strandtrnL-CAA · gene · 92,542-92,622 bp · − strandndhB · gene · 93,183-95,336 bp · − strandrps7 · gene · 95,665-96,132 bp · − strandtrnV-GAC · gene · 98,595-98,666 bp · + strandrrn16 · gene · 98,893-100,383 bp · + strandtrnI-GAU · gene · 100,682-101,700 bp · + strandtrnA-UGC · gene · 101,765-102,641 bp · + strandrrn23 · gene · 102,807-105,615 bp · + strandrrn4.5 · gene · 105,716-105,818 bp · + strandrrn5 · gene · 106,074-106,194 bp · + strandtrnR-ACG · gene · 106,438-106,511 bp · + strandtrnN-GUU · gene · 107,031-107,102 bp · − strandndhF · gene · 108,449-110,668 bp · − strandrpl32 · gene · 111,087-111,257 bp · + strandtrnL-UAG · gene · 111,985-112,064 bp · + strandccsA · gene · 112,161-113,138 bp · + strandndhD · gene · 113,359-114,840 bp · − strandpsaC · gene · 115,007-115,252 bp · − strandndhE · gene · 115,503-115,808 bp · − strandndhG · gene · 116,029-116,559 bp · − strandndhI · gene · 116,942-117,448 bp · − strandndhA · gene · 117,529-119,622 bp · − strandndhH · gene · 119,624-120,835 bp · − strandrps15 · gene · 120,905-121,183 bp · − strandycf1 · gene · 121,600-127,251 bp · − strandtrnN-GUU · gene · 127,470-127,541 bp · + strandtrnR-ACG · gene · 128,061-128,134 bp · − strandrrn5 · gene · 128,378-128,498 bp · − strandrrn4.5 · gene · 128,754-128,856 bp · − strandrrn23 · gene · 128,957-131,765 bp · − strandtrnA-UGC · gene · 131,931-132,807 bp · − strandtrnI-GAU · gene · 132,872-133,890 bp · − strandrrn16 · gene · 134,189-135,679 bp · − strandtrnV-GAC · gene · 135,906-135,977 bp · − strandrps7 · gene · 138,440-138,907 bp · + strandndhB · gene · 139,236-141,389 bp · + strandtrnL-CAA · gene · 141,950-142,030 bp · + strandycf15 · gene · 142,291-142,554 bp · − strandycf2 · gene · 142,630-149,481 bp · − strandtrnI-CAU · gene · 149,570-149,643 bp · + strandrpl23 · gene · 149,809-150,090 bp · + strandrpl2 · gene · 150,109-151,586 bp · + strandrps19 · gene · 151,646-151,688 bp · + strandSalvia petrophilaANNOTATED PLASTOMENC_050899.1151,688 bp · 133 genesOuter ring: forward strand · inner ring: reverse strand · click a gene to open its pageGene functionTranslation RnaPhotosystem IiOtherRibosomal ProteinAtp SynthaseRna PolymeraseCytochromePhotosystem INad DehydrogenaseRibosomal RnaVerified annotationSource: NCBI GenBankAccession: NC_050899.1Features: 133 coordinate-linked genesHover for coordinates · click for gene page

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features
GeneTypeGroupStrandStartEndLength
trnH-GUGgenetranslation-rna−108474
psbAgenephotosystem-ii−39814571059
trnK-UUUgenetranslation-rna−168842682580
matKgeneother−201235361524
rps16generibosomal-protein−483659541118
trnQ-UUGgenetranslation-rna−6849692172
psbKgenephotosystem-ii+73127501189
psbIgenephotosystem-ii+78988009111
trnS-GCUgenetranslation-rna−8164825288
trnG-UCCgenetranslation-rna+89469700754
trnR-UCUgenetranslation-rna+9881995372
atpAgeneatp-synthase−10059115831524
atpFgeneatp-synthase−11676129241248
atpHgeneatp-synthase−1319013436246
atpIgeneatp-synthase−1443315177744
rps2generibosomal-protein−1540116112711
rpoC2generna-polymerase−16319205074188
rpoC1generna-polymerase−20671234922821
rpoBgenerna-polymerase−23518267313213
trnC-GCAgenetranslation-rna+278752794671
petNgenecytochrome+281092819990
psbMgenephotosystem-ii−2918329288105
trnD-GUCgenetranslation-rna−297822985674
trnY-GUAgenetranslation-rna−299593004384
trnE-UUCgenetranslation-rna−301143018773
trnT-GGUgenetranslation-rna+307433081572
psbDgenephotosystem-ii+32188332501062
psbCgenephotosystem-ii+33197346191422
trnS-UGAgenetranslation-rna−348643495793
psbZgenephotosystem-ii+3521635480264
trnG-GCCgenetranslation-rna+357513582271
trnfM-CAUgenetranslation-rna−359993607374
rps14generibosomal-protein−3621736520303
psaBgenephotosystem-i−36642388472205
psaAgenephotosystem-i−38872411252253
ycf3geneother−41916438501934
trnS-GGAgenetranslation-rna+446664475387
rps4generibosomal-protein−4503545641606
trnT-UGUgenetranslation-rna−459894606273
trnL-UAAgenetranslation-rna+4674247296554
trnF-GAAgenetranslation-rna+476014767473
ndhJgenenad-dehydrogenase−4821748712495
ndhKgenenad-dehydrogenase−4886749482615
ndhCgenenad-dehydrogenase−4953349896363
trnV-UACgenetranslation-rna−5084651490644
trnM-CAUgenetranslation-rna+516705174373
atpEgeneatp-synthase−5195352355402
atpBgeneatp-synthase−52351538481497
rbcLgeneother+54611560661455
accDgeneother+56773582551482
psaIgenephotosystem-i+5872558836111
ycf4geneother+5928159836555
cemAgeneother+6049561185690
petAgenecytochrome+6139962362963
psbJgenephotosystem-ii−6341263535123
psbLgenephotosystem-ii−6366963786117
psbFgenephotosystem-ii−6380963929120
psbEgenephotosystem-ii−6394364195252
petLgenecytochrome+650276512396
petGgenecytochrome+6530165415114
trnW-CCAgenetranslation-rna−655296560374
trnP-UGGgenetranslation-rna−657776585174
psaJgenephotosystem-i+6609966273174
rpl33generibosomal-protein+6672266923201
rps18generibosomal-protein+6709367399306
rpl20generibosomal-protein−6763268019387
rps12generibosomal-protein−688159696928154
rps12generibosomal-protein+6881513838669571
clpPgeneother−69053709571904
psbBgenephotosystem-ii+71405729321527
psbTgenephotosystem-ii+7311773225108
psbNgenephotosystem-ii−7328573417132
psbHgenephotosystem-ii+7350473744240
petBgenecytochrome+73869752291360
petDgenecytochrome+75416766131197
rpoAgenerna-polymerase−76789777971008
rps11generibosomal-protein−7786878285417
rpl36generibosomal-protein−7839478508114
infAgeneother−7860378837234
rps8generibosomal-protein−7896379368405
rpl14generibosomal-protein−7955679925369
rpl16generibosomal-protein−80056813251269
rps3generibosomal-protein−8146082123663
rpl22generibosomal-protein−8210782575468
rps19generibosomal-protein−8264482926282
rpl2generibosomal-protein−82985844631478
rpl23generibosomal-protein−8448184763282
trnI-CAUgenetranslation-rna−849288500274
ycf2geneother+85090919426852
ycf15geneother+9201792281264
trnL-CAAgenetranslation-rna−925419262281
ndhBgenenad-dehydrogenase−93182953362154
rps7generibosomal-protein−9566496132468
trnV-GACgenetranslation-rna+985949866672
rrn16generibosomal-rna+988921003831491
trnI-GAUgenetranslation-rna+1006811017001019
trnA-UGCgenetranslation-rna+101764102641877
rrn23generibosomal-rna+1028061056152809
rrn4.5generibosomal-rna+105715105818103
rrn5generibosomal-rna+106073106194121
trnR-ACGgenetranslation-rna+10643710651174
trnN-GUUgenetranslation-rna−10703010710272
ndhFgenenad-dehydrogenase−1084481106682220
rpl32generibosomal-protein+111086111257171
trnL-UAGgenetranslation-rna+11198411206480
ccsAgeneother+112160113138978
ndhDgenenad-dehydrogenase−1133581148401482
psaCgenephotosystem-i−115006115252246
ndhEgenenad-dehydrogenase−115502115808306
ndhGgenenad-dehydrogenase−116028116559531
ndhIgenenad-dehydrogenase−116941117448507
ndhAgenenad-dehydrogenase−1175281196222094
ndhHgenenad-dehydrogenase−1196231208351212
rps15generibosomal-protein−120904121183279
ycf1geneother−1215991272515652
trnN-GUUgenetranslation-rna+12746912754172
trnR-ACGgenetranslation-rna−12806012813474
rrn5generibosomal-rna−128377128498121
rrn4.5generibosomal-rna−128753128856103
rrn23generibosomal-rna−1289561317652809
trnA-UGCgenetranslation-rna−131930132807877
trnI-GAUgenetranslation-rna−1328711338901019
rrn16generibosomal-rna−1341881356791491
trnV-GACgenetranslation-rna−13590513597772
rps7generibosomal-protein+138439138907468
ndhBgenenad-dehydrogenase+1392351413892154
trnL-CAAgenetranslation-rna+14194914203081
ycf15geneother−142290142554264
ycf2geneother−1426291494816852
trnI-CAUgenetranslation-rna+14956914964374
rpl23generibosomal-protein+149808150090282
rpl2generibosomal-protein+1501081515861478
rps19generibosomal-protein+15164515168843

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Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources