Salvia petrophila chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
LSC
IR
SSC
IR
trnH-GUG · NC_050899.1 · 11–84 bp · −
psbA · NC_050899.1 · 399–1,457 bp · −
trnK-UUU · NC_050899.1 · 1,689–4,268 bp · −
matK · NC_050899.1 · 2,013–3,536 bp · −
rps16 · NC_050899.1 · 4,837–5,954 bp · −
trnQ-UUG · NC_050899.1 · 6,850–6,921 bp · −
trnS-GCU · NC_050899.1 · 8,165–8,252 bp · −
atpA · NC_050899.1 · 10,060–11,583 bp · −
atpF · NC_050899.1 · 11,677–12,924 bp · −
atpH · NC_050899.1 · 13,191–13,436 bp · −
atpI · NC_050899.1 · 14,434–15,177 bp · −
rps2 · NC_050899.1 · 15,402–16,112 bp · −
rpoC2 · NC_050899.1 · 16,320–20,507 bp · −
rpoC1 · NC_050899.1 · 20,672–23,492 bp · −
rpoB · NC_050899.1 · 23,519–26,731 bp · −
psbM · NC_050899.1 · 29,184–29,288 bp · −
trnD-GUC · NC_050899.1 · 29,783–29,856 bp · −
trnY-GUA · NC_050899.1 · 29,960–30,043 bp · −
trnE-UUC · NC_050899.1 · 30,115–30,187 bp · −
trnS-UGA · NC_050899.1 · 34,865–34,957 bp · −
trnfM-CAU · NC_050899.1 · 36,000–36,073 bp · −
rps14 · NC_050899.1 · 36,218–36,520 bp · −
psaB · NC_050899.1 · 36,643–38,847 bp · −
psaA · NC_050899.1 · 38,873–41,125 bp · −
ycf3 · NC_050899.1 · 41,917–43,850 bp · −
rps4 · NC_050899.1 · 45,036–45,641 bp · −
trnT-UGU · NC_050899.1 · 45,990–46,062 bp · −
ndhJ · NC_050899.1 · 48,218–48,712 bp · −
ndhK · NC_050899.1 · 48,868–49,482 bp · −
ndhC · NC_050899.1 · 49,534–49,896 bp · −
trnV-UAC · NC_050899.1 · 50,847–51,490 bp · −
atpE · NC_050899.1 · 51,954–52,355 bp · −
atpB · NC_050899.1 · 52,352–53,848 bp · −
psbJ · NC_050899.1 · 63,413–63,535 bp · −
psbL · NC_050899.1 · 63,670–63,786 bp · −
psbF · NC_050899.1 · 63,810–63,929 bp · −
psbE · NC_050899.1 · 63,944–64,195 bp · −
trnW-CCA · NC_050899.1 · 65,530–65,603 bp · −
trnP-UGG · NC_050899.1 · 65,778–65,851 bp · −
rpl20 · NC_050899.1 · 67,633–68,019 bp · −
rps12 · NC_050899.1 · 68,816–68,929 bp · −
rps12 · NC_050899.1 · 96,186–96,969 bp · −
clpP · NC_050899.1 · 69,054–70,957 bp · −
psbN · NC_050899.1 · 73,286–73,417 bp · −
rpoA · NC_050899.1 · 76,790–77,797 bp · −
rps11 · NC_050899.1 · 77,869–78,285 bp · −
rpl36 · NC_050899.1 · 78,395–78,508 bp · −
infA · NC_050899.1 · 78,604–78,837 bp · −
rps8 · NC_050899.1 · 78,964–79,368 bp · −
rpl14 · NC_050899.1 · 79,557–79,925 bp · −
rpl16 · NC_050899.1 · 80,057–81,325 bp · −
rps3 · NC_050899.1 · 81,461–82,123 bp · −
rpl22 · NC_050899.1 · 82,108–82,575 bp · −
rps19 · NC_050899.1 · 82,645–82,926 bp · −
rpl2 · NC_050899.1 · 82,986–84,463 bp · −
rpl23 · NC_050899.1 · 84,482–84,763 bp · −
trnI-CAU · NC_050899.1 · 84,929–85,002 bp · −
trnL-CAA · NC_050899.1 · 92,542–92,622 bp · −
ndhB · NC_050899.1 · 93,183–95,336 bp · −
rps7 · NC_050899.1 · 95,665–96,132 bp · −
trnN-GUU · NC_050899.1 · 107,031–107,102 bp · −
ndhF · NC_050899.1 · 108,449–110,668 bp · −
ndhD · NC_050899.1 · 113,359–114,840 bp · −
psaC · NC_050899.1 · 115,007–115,252 bp · −
ndhE · NC_050899.1 · 115,503–115,808 bp · −
ndhG · NC_050899.1 · 116,029–116,559 bp · −
ndhI · NC_050899.1 · 116,942–117,448 bp · −
ndhA · NC_050899.1 · 117,529–119,622 bp · −
ndhH · NC_050899.1 · 119,624–120,835 bp · −
rps15 · NC_050899.1 · 120,905–121,183 bp · −
ycf1 · NC_050899.1 · 121,600–127,251 bp · −
trnR-ACG · NC_050899.1 · 128,061–128,134 bp · −
rrn5 · NC_050899.1 · 128,378–128,498 bp · −
rrn4.5 · NC_050899.1 · 128,754–128,856 bp · −
rrn23 · NC_050899.1 · 128,957–131,765 bp · −
trnA-UGC · NC_050899.1 · 131,931–132,807 bp · −
trnI-GAU · NC_050899.1 · 132,872–133,890 bp · −
rrn16 · NC_050899.1 · 134,189–135,679 bp · −
trnV-GAC · NC_050899.1 · 135,906–135,977 bp · −
ycf15 · NC_050899.1 · 142,291–142,554 bp · −
ycf2 · NC_050899.1 · 142,630–149,481 bp · −
psbK · NC_050899.1 · 7,313–7,501 bp · +
psbI · NC_050899.1 · 7,899–8,009 bp · +
trnG-UCC · NC_050899.1 · 8,947–9,700 bp · +
trnR-UCU · NC_050899.1 · 9,882–9,953 bp · +
trnC-GCA · NC_050899.1 · 27,876–27,946 bp · +
petN · NC_050899.1 · 28,110–28,199 bp · +
trnT-GGU · NC_050899.1 · 30,744–30,815 bp · +
psbD · NC_050899.1 · 32,189–33,250 bp · +
psbC · NC_050899.1 · 33,198–34,619 bp · +
psbZ · NC_050899.1 · 35,217–35,480 bp · +
trnG-GCC · NC_050899.1 · 35,752–35,822 bp · +
trnS-GGA · NC_050899.1 · 44,667–44,753 bp · +
trnL-UAA · NC_050899.1 · 46,743–47,296 bp · +
trnF-GAA · NC_050899.1 · 47,602–47,674 bp · +
trnM-CAU · NC_050899.1 · 51,671–51,743 bp · +
rbcL · NC_050899.1 · 54,612–56,066 bp · +
accD · NC_050899.1 · 56,774–58,255 bp · +
psaI · NC_050899.1 · 58,726–58,836 bp · +
ycf4 · NC_050899.1 · 59,282–59,836 bp · +
cemA · NC_050899.1 · 60,496–61,185 bp · +
petA · NC_050899.1 · 61,400–62,362 bp · +
petL · NC_050899.1 · 65,028–65,123 bp · +
petG · NC_050899.1 · 65,302–65,415 bp · +
psaJ · NC_050899.1 · 66,100–66,273 bp · +
rpl33 · NC_050899.1 · 66,723–66,923 bp · +
rps18 · NC_050899.1 · 67,094–67,399 bp · +
rps12 · NC_050899.1 · 137,603–138,386 bp · +
psbB · NC_050899.1 · 71,406–72,932 bp · +
psbT · NC_050899.1 · 73,118–73,225 bp · +
psbH · NC_050899.1 · 73,505–73,744 bp · +
petB · NC_050899.1 · 73,870–75,229 bp · +
petD · NC_050899.1 · 75,417–76,613 bp · +
ycf2 · NC_050899.1 · 85,091–91,942 bp · +
ycf15 · NC_050899.1 · 92,018–92,281 bp · +
trnV-GAC · NC_050899.1 · 98,595–98,666 bp · +
rrn16 · NC_050899.1 · 98,893–100,383 bp · +
trnI-GAU · NC_050899.1 · 100,682–101,700 bp · +
trnA-UGC · NC_050899.1 · 101,765–102,641 bp · +
rrn23 · NC_050899.1 · 102,807–105,615 bp · +
rrn4.5 · NC_050899.1 · 105,716–105,818 bp · +
rrn5 · NC_050899.1 · 106,074–106,194 bp · +
trnR-ACG · NC_050899.1 · 106,438–106,511 bp · +
rpl32 · NC_050899.1 · 111,087–111,257 bp · +
trnL-UAG · NC_050899.1 · 111,985–112,064 bp · +
ccsA · NC_050899.1 · 112,161–113,138 bp · +
trnN-GUU · NC_050899.1 · 127,470–127,541 bp · +
rps7 · NC_050899.1 · 138,440–138,907 bp · +
ndhB · NC_050899.1 · 139,236–141,389 bp · +
trnL-CAA · NC_050899.1 · 141,950–142,030 bp · +
trnI-CAU · NC_050899.1 · 149,570–149,643 bp · +
rpl23 · NC_050899.1 · 149,809–150,090 bp · +
rpl2 · NC_050899.1 · 150,109–151,586 bp · +
rps19 · NC_050899.1 · 151,646–151,688 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Salvia petrophila
ANNOTATED PLASTOME
NC_050899.1
151,688 bp · 133 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37922 75844 113766 151688 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2 rps19
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
134 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 11 84 74 Locate
psbA gene − 399 1457 1059 Locate
trnK-UUU gene − 1689 4268 2580 Locate
matK gene − 2013 3536 1524 Locate
rps16 gene − 4837 5954 1118 Locate
trnQ-UUG gene − 6850 6921 72 Locate
psbK gene + 7313 7501 189 Locate
psbI gene + 7899 8009 111 Locate
trnS-GCU gene − 8165 8252 88 Locate
trnG-UCC gene + 8947 9700 754 Locate
trnR-UCU gene + 9882 9953 72 Locate
atpA gene − 10060 11583 1524 Locate
atpF gene − 11677 12924 1248 Locate
atpH gene − 13191 13436 246 Locate
atpI gene − 14434 15177 744 Locate
rps2 gene − 15402 16112 711 Locate
rpoC2 gene − 16320 20507 4188 Locate
rpoC1 gene − 20672 23492 2821 Locate
rpoB gene − 23519 26731 3213 Locate
trnC-GCA gene + 27876 27946 71 Locate
petN gene + 28110 28199 90 Locate
psbM gene − 29184 29288 105 Locate
trnD-GUC gene − 29783 29856 74 Locate
trnY-GUA gene − 29960 30043 84 Locate
trnE-UUC gene − 30115 30187 73 Locate
trnT-GGU gene + 30744 30815 72 Locate
psbD gene + 32189 33250 1062 Locate
psbC gene + 33198 34619 1422 Locate
trnS-UGA gene − 34865 34957 93 Locate
psbZ gene + 35217 35480 264 Locate
trnG-GCC gene + 35752 35822 71 Locate
trnfM-CAU gene − 36000 36073 74 Locate
rps14 gene − 36218 36520 303 Locate
psaB gene − 36643 38847 2205 Locate
psaA gene − 38873 41125 2253 Locate
ycf3 gene − 41917 43850 1934 Locate
trnS-GGA gene + 44667 44753 87 Locate
rps4 gene − 45036 45641 606 Locate
trnT-UGU gene − 45990 46062 73 Locate
trnL-UAA gene + 46743 47296 554 Locate
trnF-GAA gene + 47602 47674 73 Locate
ndhJ gene − 48218 48712 495 Locate
ndhK gene − 48868 49482 615 Locate
ndhC gene − 49534 49896 363 Locate
trnV-UAC gene − 50847 51490 644 Locate
trnM-CAU gene + 51671 51743 73 Locate
atpE gene − 51954 52355 402 Locate
atpB gene − 52352 53848 1497 Locate
rbcL gene + 54612 56066 1455 Locate
accD gene + 56774 58255 1482 Locate
psaI gene + 58726 58836 111 Locate
ycf4 gene + 59282 59836 555 Locate
cemA gene + 60496 61185 690 Locate
petA gene + 61400 62362 963 Locate
psbJ gene − 63413 63535 123 Locate
psbL gene − 63670 63786 117 Locate
psbF gene − 63810 63929 120 Locate
psbE gene − 63944 64195 252 Locate
petL gene + 65028 65123 96 Locate
petG gene + 65302 65415 114 Locate
trnW-CCA gene − 65530 65603 74 Locate
trnP-UGG gene − 65778 65851 74 Locate
psaJ gene + 66100 66273 174 Locate
rpl33 gene + 66723 66923 201 Locate
rps18 gene + 67094 67399 306 Locate
rpl20 gene − 67633 68019 387 Locate
rps12 gene − 68816 68929 114 Locate
clpP gene − 69054 70957 1904 Locate
psbB gene + 71406 72932 1527 Locate
psbT gene + 73118 73225 108 Locate
psbN gene − 73286 73417 132 Locate
psbH gene + 73505 73744 240 Locate
petB gene + 73870 75229 1360 Locate
petD gene + 75417 76613 1197 Locate
rpoA gene − 76790 77797 1008 Locate
rps11 gene − 77869 78285 417 Locate
rpl36 gene − 78395 78508 114 Locate
infA gene − 78604 78837 234 Locate
rps8 gene − 78964 79368 405 Locate
rpl14 gene − 79557 79925 369 Locate
rpl16 gene − 80057 81325 1269 Locate
rps3 gene − 81461 82123 663 Locate
rpl22 gene − 82108 82575 468 Locate
rps19 gene − 82645 82926 282 Locate
rpl2 gene − 82986 84463 1478 Locate
rpl23 gene − 84482 84763 282 Locate
trnI-CAU gene − 84929 85002 74 Locate
ycf2 gene + 85091 91942 6852 Locate
ycf15 gene + 92018 92281 264 Locate
trnL-CAA gene − 92542 92622 81 Locate
ndhB gene − 93183 95336 2154 Locate
rps7 gene − 95665 96132 468 Locate
rps12 gene − 96186 96969 784 Locate
trnV-GAC gene + 98595 98666 72 Locate
rrn16 gene + 98893 100383 1491 Locate
trnI-GAU gene + 100682 101700 1019 Locate
trnA-UGC gene + 101765 102641 877 Locate
rrn23 gene + 102807 105615 2809 Locate
rrn4.5 gene + 105716 105818 103 Locate
rrn5 gene + 106074 106194 121 Locate
trnR-ACG gene + 106438 106511 74 Locate
trnN-GUU gene − 107031 107102 72 Locate
ndhF gene − 108449 110668 2220 Locate
rpl32 gene + 111087 111257 171 Locate
trnL-UAG gene + 111985 112064 80 Locate
ccsA gene + 112161 113138 978 Locate
ndhD gene − 113359 114840 1482 Locate
psaC gene − 115007 115252 246 Locate
ndhE gene − 115503 115808 306 Locate
ndhG gene − 116029 116559 531 Locate
ndhI gene − 116942 117448 507 Locate
ndhA gene − 117529 119622 2094 Locate
ndhH gene − 119624 120835 1212 Locate
rps15 gene − 120905 121183 279 Locate
ycf1 gene − 121600 127251 5652 Locate
trnN-GUU gene + 127470 127541 72 Locate
trnR-ACG gene − 128061 128134 74 Locate
rrn5 gene − 128378 128498 121 Locate
rrn4.5 gene − 128754 128856 103 Locate
rrn23 gene − 128957 131765 2809 Locate
trnA-UGC gene − 131931 132807 877 Locate
trnI-GAU gene − 132872 133890 1019 Locate
rrn16 gene − 134189 135679 1491 Locate
trnV-GAC gene − 135906 135977 72 Locate
rps12 gene + 137603 138386 784 Locate
rps7 gene + 138440 138907 468 Locate
ndhB gene + 139236 141389 2154 Locate
trnL-CAA gene + 141950 142030 81 Locate
ycf15 gene − 142291 142554 264 Locate
ycf2 gene − 142630 149481 6852 Locate
trnI-CAU gene + 149570 149643 74 Locate
rpl23 gene + 149809 150090 282 Locate
rpl2 gene + 150109 151586 1478 Locate
rps19 gene + 151646 151688 43 Locate
Status Available
Accession NC_050899.1
Length 151,688 bp
GC content 38.0%
Annotated genes 133
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 14 Ribosomal Protein 27 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources