Salvia plebeia chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · NC_050929.1 · 12–85 bp · −
psbA · NC_050929.1 · 394–1,452 bp · −
trnK-UUU · NC_050929.1 · 1,684–4,277 bp · −
matK · NC_050929.1 · 1,983–3,545 bp · −
rps16 · NC_050929.1 · 4,844–5,956 bp · −
trnQ-UUG · NC_050929.1 · 6,917–6,988 bp · −
trnS-GCU · NC_050929.1 · 8,187–8,274 bp · −
atpA · NC_050929.1 · 10,080–11,603 bp · −
atpF · NC_050929.1 · 11,689–12,932 bp · −
atpH · NC_050929.1 · 13,198–13,443 bp · −
atpI · NC_050929.1 · 14,442–15,185 bp · −
rps2 · NC_050929.1 · 15,411–16,121 bp · −
rpoC2 · NC_050929.1 · 16,330–20,508 bp · −
rpoC1 · NC_050929.1 · 20,666–23,476 bp · −
rpoB · NC_050929.1 · 23,482–26,694 bp · −
psbM · NC_050929.1 · 29,121–29,225 bp · −
trnD-GUC · NC_050929.1 · 29,746–29,819 bp · −
trnY-GUA · NC_050929.1 · 29,930–30,013 bp · −
trnE-UUC · NC_050929.1 · 30,085–30,157 bp · −
trnS-UGA · NC_050929.1 · 34,680–34,772 bp · −
trnfM-CAU · NC_050929.1 · 35,825–35,898 bp · −
rps14 · NC_050929.1 · 36,043–36,345 bp · −
psaB · NC_050929.1 · 36,468–38,672 bp · −
psaA · NC_050929.1 · 38,698–40,950 bp · −
ycf3 · NC_050929.1 · 41,704–43,631 bp · −
rps4 · NC_050929.1 · 44,800–45,405 bp · −
trnT-UGU · NC_050929.1 · 45,757–45,829 bp · −
ndhJ · NC_050929.1 · 47,944–48,420 bp · −
ndhK · NC_050929.1 · 48,531–49,208 bp · −
ndhC · NC_050929.1 · 49,260–49,622 bp · −
trnV-UAC · NC_050929.1 · 50,566–51,214 bp · −
atpE · NC_050929.1 · 51,678–52,079 bp · −
atpB · NC_050929.1 · 52,076–53,572 bp · −
psbJ · NC_050929.1 · 62,994–63,116 bp · −
psbL · NC_050929.1 · 63,246–63,362 bp · −
psbF · NC_050929.1 · 63,386–63,505 bp · −
psbE · NC_050929.1 · 63,520–63,771 bp · −
trnW-CCA · NC_050929.1 · 65,079–65,152 bp · −
trnP-UGG · NC_050929.1 · 65,331–65,404 bp · −
rpl20 · NC_050929.1 · 67,190–67,576 bp · −
rps12 · NC_050929.1 · 68,392–68,505 bp · −
rps12 · NC_050929.1 · 95,729–96,512 bp · −
clpP · NC_050929.1 · 68,629–70,523 bp · −
psbN · NC_050929.1 · 72,837–72,968 bp · −
rpoA · NC_050929.1 · 76,349–77,356 bp · −
rps11 · NC_050929.1 · 77,429–77,845 bp · −
rpl36 · NC_050929.1 · 77,955–78,068 bp · −
infA · NC_050929.1 · 78,164–78,397 bp · −
rps8 · NC_050929.1 · 78,524–78,928 bp · −
rpl14 · NC_050929.1 · 79,114–79,482 bp · −
rpl16 · NC_050929.1 · 79,614–80,893 bp · −
rps3 · NC_050929.1 · 81,029–81,691 bp · −
rpl22 · NC_050929.1 · 81,676–82,143 bp · −
rps19 · NC_050929.1 · 82,218–82,496 bp · −
rpl2 · NC_050929.1 · 82,557–84,031 bp · −
rpl23 · NC_050929.1 · 84,050–84,331 bp · −
trnI-CAU · NC_050929.1 · 84,497–84,570 bp · −
trnL-CAA · NC_050929.1 · 92,086–92,166 bp · −
ndhB · NC_050929.1 · 92,726–94,879 bp · −
rps7 · NC_050929.1 · 95,208–95,675 bp · −
trnN-GUU · NC_050929.1 · 106,539–106,610 bp · −
ndhF · NC_050929.1 · 107,964–110,180 bp · −
ndhD · NC_050929.1 · 112,894–114,294 bp · −
psaC · NC_050929.1 · 114,531–114,776 bp · −
ndhE · NC_050929.1 · 115,027–115,332 bp · −
ndhG · NC_050929.1 · 115,546–116,076 bp · −
ndhI · NC_050929.1 · 116,458–116,964 bp · −
ndhA · NC_050929.1 · 117,045–119,139 bp · −
ndhH · NC_050929.1 · 119,141–120,322 bp · −
rps15 · NC_050929.1 · 120,412–120,684 bp · −
ycf1 · NC_050929.1 · 121,049–126,577 bp · −
trnR-ACG · NC_050929.1 · 127,498–127,571 bp · −
rrn5 · NC_050929.1 · 127,815–127,935 bp · −
rrn4.5 · NC_050929.1 · 128,191–128,293 bp · −
rrn23 · NC_050929.1 · 128,392–131,202 bp · −
trnA-UGC · NC_050929.1 · 131,368–132,244 bp · −
trnI-GAU · NC_050929.1 · 132,309–133,322 bp · −
rrn16 · NC_050929.1 · 133,621–135,111 bp · −
trnV-GAC · NC_050929.1 · 135,333–135,404 bp · −
ycf15 · NC_050929.1 · 141,692–141,940 bp · −
ycf2 · NC_050929.1 · 142,031–148,858 bp · −
psbK · NC_050929.1 · 7,375–7,554 bp · +
psbI · NC_050929.1 · 7,928–8,038 bp · +
trnG-UCC · NC_050929.1 · 8,964–9,720 bp · +
trnR-UCU · NC_050929.1 · 9,902–9,973 bp · +
trnC-GCA · NC_050929.1 · 27,822–27,892 bp · +
petN · NC_050929.1 · 28,056–28,145 bp · +
trnT-GGU · NC_050929.1 · 30,696–30,767 bp · +
psbD · NC_050929.1 · 32,005–33,066 bp · +
psbC · NC_050929.1 · 33,014–34,435 bp · +
psbZ · NC_050929.1 · 35,107–35,295 bp · +
trnG-GCC · NC_050929.1 · 35,574–35,644 bp · +
trnS-GGA · NC_050929.1 · 44,437–44,523 bp · +
trnL-UAA · NC_050929.1 · 46,500–47,039 bp · +
trnF-GAA · NC_050929.1 · 47,338–47,410 bp · +
trnM-CAU · NC_050929.1 · 51,395–51,467 bp · +
rbcL · NC_050929.1 · 54,357–55,790 bp · +
accD · NC_050929.1 · 56,503–58,008 bp · +
psaI · NC_050929.1 · 58,354–58,464 bp · +
ycf4 · NC_050929.1 · 58,913–59,467 bp · +
cemA · NC_050929.1 · 60,071–60,760 bp · +
petA · NC_050929.1 · 60,981–61,943 bp · +
petL · NC_050929.1 · 64,577–64,672 bp · +
petG · NC_050929.1 · 64,851–64,964 bp · +
psaJ · NC_050929.1 · 65,695–65,829 bp · +
rpl33 · NC_050929.1 · 66,285–66,485 bp · +
rps18 · NC_050929.1 · 66,651–66,956 bp · +
rps12 · NC_050929.1 · 137,005–137,788 bp · +
psbB · NC_050929.1 · 70,965–72,491 bp · +
psbT · NC_050929.1 · 72,669–72,776 bp · +
psbH · NC_050929.1 · 73,074–73,295 bp · +
petB · NC_050929.1 · 73,421–74,778 bp · +
petD · NC_050929.1 · 74,972–76,172 bp · +
ycf2 · NC_050929.1 · 84,659–91,486 bp · +
ycf15 · NC_050929.1 · 91,577–91,825 bp · +
trnV-GAC · NC_050929.1 · 98,113–98,184 bp · +
rrn16 · NC_050929.1 · 98,406–99,896 bp · +
trnI-GAU · NC_050929.1 · 100,195–101,208 bp · +
trnA-UGC · NC_050929.1 · 101,273–102,149 bp · +
rrn23 · NC_050929.1 · 102,315–105,125 bp · +
rrn4.5 · NC_050929.1 · 105,224–105,326 bp · +
rrn5 · NC_050929.1 · 105,582–105,702 bp · +
trnR-ACG · NC_050929.1 · 105,946–106,019 bp · +
rpl32 · NC_050929.1 · 110,626–110,796 bp · +
trnL-UAG · NC_050929.1 · 111,512–111,591 bp · +
ccsA · NC_050929.1 · 111,685–112,662 bp · +
trnN-GUU · NC_050929.1 · 126,907–126,978 bp · +
rps7 · NC_050929.1 · 137,842–138,309 bp · +
ndhB · NC_050929.1 · 138,638–140,791 bp · +
trnL-CAA · NC_050929.1 · 141,351–141,431 bp · +
trnI-CAU · NC_050929.1 · 148,947–149,020 bp · +
rpl23 · NC_050929.1 · 149,186–149,467 bp · +
rpl2 · NC_050929.1 · 149,486–150,960 bp · +
rps19 · NC_050929.1 · 151,021–151,056 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Salvia plebeia
ANNOTATED PLASTOME
NC_050929.1
151,062 bp · 133 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37766 75531 113296 151062 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2 rps19
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
134 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 12 85 74 Locate
psbA gene − 394 1452 1059 Locate
trnK-UUU gene − 1684 4277 2594 Locate
matK gene − 1983 3545 1563 Locate
rps16 gene − 4844 5956 1113 Locate
trnQ-UUG gene − 6917 6988 72 Locate
psbK gene + 7375 7554 180 Locate
psbI gene + 7928 8038 111 Locate
trnS-GCU gene − 8187 8274 88 Locate
trnG-UCC gene + 8964 9720 757 Locate
trnR-UCU gene + 9902 9973 72 Locate
atpA gene − 10080 11603 1524 Locate
atpF gene − 11689 12932 1244 Locate
atpH gene − 13198 13443 246 Locate
atpI gene − 14442 15185 744 Locate
rps2 gene − 15411 16121 711 Locate
rpoC2 gene − 16330 20508 4179 Locate
rpoC1 gene − 20666 23476 2811 Locate
rpoB gene − 23482 26694 3213 Locate
trnC-GCA gene + 27822 27892 71 Locate
petN gene + 28056 28145 90 Locate
psbM gene − 29121 29225 105 Locate
trnD-GUC gene − 29746 29819 74 Locate
trnY-GUA gene − 29930 30013 84 Locate
trnE-UUC gene − 30085 30157 73 Locate
trnT-GGU gene + 30696 30767 72 Locate
psbD gene + 32005 33066 1062 Locate
psbC gene + 33014 34435 1422 Locate
trnS-UGA gene − 34680 34772 93 Locate
psbZ gene + 35107 35295 189 Locate
trnG-GCC gene + 35574 35644 71 Locate
trnfM-CAU gene − 35825 35898 74 Locate
rps14 gene − 36043 36345 303 Locate
psaB gene − 36468 38672 2205 Locate
psaA gene − 38698 40950 2253 Locate
ycf3 gene − 41704 43631 1928 Locate
trnS-GGA gene + 44437 44523 87 Locate
rps4 gene − 44800 45405 606 Locate
trnT-UGU gene − 45757 45829 73 Locate
trnL-UAA gene + 46500 47039 540 Locate
trnF-GAA gene + 47338 47410 73 Locate
ndhJ gene − 47944 48420 477 Locate
ndhK gene − 48531 49208 678 Locate
ndhC gene − 49260 49622 363 Locate
trnV-UAC gene − 50566 51214 649 Locate
trnM-CAU gene + 51395 51467 73 Locate
atpE gene − 51678 52079 402 Locate
atpB gene − 52076 53572 1497 Locate
rbcL gene + 54357 55790 1434 Locate
accD gene + 56503 58008 1506 Locate
psaI gene + 58354 58464 111 Locate
ycf4 gene + 58913 59467 555 Locate
cemA gene + 60071 60760 690 Locate
petA gene + 60981 61943 963 Locate
psbJ gene − 62994 63116 123 Locate
psbL gene − 63246 63362 117 Locate
psbF gene − 63386 63505 120 Locate
psbE gene − 63520 63771 252 Locate
petL gene + 64577 64672 96 Locate
petG gene + 64851 64964 114 Locate
trnW-CCA gene − 65079 65152 74 Locate
trnP-UGG gene − 65331 65404 74 Locate
psaJ gene + 65695 65829 135 Locate
rpl33 gene + 66285 66485 201 Locate
rps18 gene + 66651 66956 306 Locate
rpl20 gene − 67190 67576 387 Locate
rps12 gene − 68392 68505 114 Locate
clpP gene − 68629 70523 1895 Locate
psbB gene + 70965 72491 1527 Locate
psbT gene + 72669 72776 108 Locate
psbN gene − 72837 72968 132 Locate
psbH gene + 73074 73295 222 Locate
petB gene + 73421 74778 1358 Locate
petD gene + 74972 76172 1201 Locate
rpoA gene − 76349 77356 1008 Locate
rps11 gene − 77429 77845 417 Locate
rpl36 gene − 77955 78068 114 Locate
infA gene − 78164 78397 234 Locate
rps8 gene − 78524 78928 405 Locate
rpl14 gene − 79114 79482 369 Locate
rpl16 gene − 79614 80893 1280 Locate
rps3 gene − 81029 81691 663 Locate
rpl22 gene − 81676 82143 468 Locate
rps19 gene − 82218 82496 279 Locate
rpl2 gene − 82557 84031 1475 Locate
rpl23 gene − 84050 84331 282 Locate
trnI-CAU gene − 84497 84570 74 Locate
ycf2 gene + 84659 91486 6828 Locate
ycf15 gene + 91577 91825 249 Locate
trnL-CAA gene − 92086 92166 81 Locate
ndhB gene − 92726 94879 2154 Locate
rps7 gene − 95208 95675 468 Locate
rps12 gene − 95729 96512 784 Locate
trnV-GAC gene + 98113 98184 72 Locate
rrn16 gene + 98406 99896 1491 Locate
trnI-GAU gene + 100195 101208 1014 Locate
trnA-UGC gene + 101273 102149 877 Locate
rrn23 gene + 102315 105125 2811 Locate
rrn4.5 gene + 105224 105326 103 Locate
rrn5 gene + 105582 105702 121 Locate
trnR-ACG gene + 105946 106019 74 Locate
trnN-GUU gene − 106539 106610 72 Locate
ndhF gene − 107964 110180 2217 Locate
rpl32 gene + 110626 110796 171 Locate
trnL-UAG gene + 111512 111591 80 Locate
ccsA gene + 111685 112662 978 Locate
ndhD gene − 112894 114294 1401 Locate
psaC gene − 114531 114776 246 Locate
ndhE gene − 115027 115332 306 Locate
ndhG gene − 115546 116076 531 Locate
ndhI gene − 116458 116964 507 Locate
ndhA gene − 117045 119139 2095 Locate
ndhH gene − 119141 120322 1182 Locate
rps15 gene − 120412 120684 273 Locate
ycf1 gene − 121049 126577 5529 Locate
trnN-GUU gene + 126907 126978 72 Locate
trnR-ACG gene − 127498 127571 74 Locate
rrn5 gene − 127815 127935 121 Locate
rrn4.5 gene − 128191 128293 103 Locate
rrn23 gene − 128392 131202 2811 Locate
trnA-UGC gene − 131368 132244 877 Locate
trnI-GAU gene − 132309 133322 1014 Locate
rrn16 gene − 133621 135111 1491 Locate
trnV-GAC gene − 135333 135404 72 Locate
rps12 gene + 137005 137788 784 Locate
rps7 gene + 137842 138309 468 Locate
ndhB gene + 138638 140791 2154 Locate
trnL-CAA gene + 141351 141431 81 Locate
ycf15 gene − 141692 141940 249 Locate
ycf2 gene − 142031 148858 6828 Locate
trnI-CAU gene + 148947 149020 74 Locate
rpl23 gene + 149186 149467 282 Locate
rpl2 gene + 149486 150960 1475 Locate
rps19 gene + 151021 151056 36 Locate
Status Available
Accession NC_050929.1
Length 151,062 bp
GC content 38.0%
Annotated genes 133
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 14 Ribosomal Protein 27 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources