Salvia prattii chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
trnH-GUG · MK944407.1 · 12–86 bp · −
psbA · MK944407.1 · 396–1,454 bp · −
trnK-UUU · MK944407.1 · 1,686–4,279 bp · −
matK · MK944407.1 · 1,985–3,547 bp · −
rps16 · MK944407.1 · 4,851–5,966 bp · −
trnQ-UUG · MK944407.1 · 6,931–7,002 bp · −
trnS-GCU · MK944407.1 · 8,221–8,308 bp · −
atpA · MK944407.1 · 10,107–11,630 bp · −
atpF · MK944407.1 · 11,737–12,986 bp · −
atpH · MK944407.1 · 13,253–13,498 bp · −
atpI · MK944407.1 · 14,501–15,244 bp · −
rps2 · MK944407.1 · 15,469–16,179 bp · −
rpoC2 · MK944407.1 · 16,388–20,575 bp · −
rpoC1 · MK944407.1 · 20,733–23,574 bp · −
rpoB · MK944407.1 · 23,580–26,792 bp · −
psbM · MK944407.1 · 29,243–29,347 bp · −
trnD-GUC · MK944407.1 · 29,866–29,939 bp · −
trnY-GUA · MK944407.1 · 30,050–30,133 bp · −
trnE-UUC · MK944407.1 · 30,199–30,271 bp · −
trnS-UGA · MK944407.1 · 34,947–35,039 bp · −
trnfM-CAU · MK944407.1 · 36,079–36,152 bp · −
rps14 · MK944407.1 · 36,297–36,599 bp · −
psaB · MK944407.1 · 36,722–38,926 bp · −
psaA · MK944407.1 · 38,952–41,204 bp · −
ycf3 · MK944407.1 · 41,994–43,934 bp · −
rps4 · MK944407.1 · 45,115–45,720 bp · −
trnT-UGU · MK944407.1 · 46,085–46,157 bp · −
ndhJ · MK944407.1 · 48,267–48,743 bp · −
ndhK · MK944407.1 · 48,854–49,531 bp · −
ndhC · MK944407.1 · 49,583–49,945 bp · −
trnV-UAC · MK944407.1 · 50,888–51,536 bp · −
atpE · MK944407.1 · 51,994–52,395 bp · −
atpB · MK944407.1 · 52,392–53,888 bp · −
psbJ · MK944407.1 · 63,430–63,552 bp · −
psbL · MK944407.1 · 63,682–63,798 bp · −
psbF · MK944407.1 · 63,822–63,941 bp · −
psbE · MK944407.1 · 63,956–64,207 bp · −
trnW-CCA · MK944407.1 · 65,484–65,557 bp · −
trnP-UGG · MK944407.1 · 65,736–65,809 bp · −
rpl20 · MK944407.1 · 67,610–67,996 bp · −
rps12 · MK944407.1 · 68,808–68,921 bp · −
rps12 · MK944407.1 · 96,204–96,987 bp · −
clpP · MK944407.1 · 69,045–70,973 bp · −
psbN · MK944407.1 · 73,296–73,427 bp · −
rpoA · MK944407.1 · 76,823–77,812 bp · −
rps11 · MK944407.1 · 77,884–78,300 bp · −
rpl36 · MK944407.1 · 78,410–78,523 bp · −
infA · MK944407.1 · 78,619–78,852 bp · −
rps8 · MK944407.1 · 78,979–79,383 bp · −
rpl14 · MK944407.1 · 79,572–79,940 bp · −
rpl16 · MK944407.1 · 80,072–81,348 bp · −
rps3 · MK944407.1 · 81,484–82,146 bp · −
rpl22 · MK944407.1 · 82,131–82,598 bp · −
rps19 · MK944407.1 · 82,668–82,946 bp · −
rpl2 · MK944407.1 · 83,006–84,488 bp · −
rpl23 · MK944407.1 · 84,507–84,788 bp · −
trnI-CAU · MK944407.1 · 84,954–85,027 bp · −
trnL-CAA · MK944407.1 · 92,561–92,641 bp · −
ndhB · MK944407.1 · 93,201–95,354 bp · −
rps7 · MK944407.1 · 95,683–96,150 bp · −
trnN-GUU · MK944407.1 · 107,043–107,116 bp · −
ndhF · MK944407.1 · 108,469–110,685 bp · −
ndhD · MK944407.1 · 113,387–114,928 bp · −
psaC · MK944407.1 · 115,026–115,271 bp · −
ndhE · MK944407.1 · 115,522–115,827 bp · −
ndhG · MK944407.1 · 116,042–116,572 bp · −
ndhI · MK944407.1 · 116,963–117,469 bp · −
ndhA · MK944407.1 · 117,550–119,644 bp · −
ndhH · MK944407.1 · 119,646–120,827 bp · −
rps15 · MK944407.1 · 120,927–121,199 bp · −
ycf1 · MK944407.1 · 121,616–127,150 bp · −
trnR-ACG · MK944407.1 · 128,070–128,144 bp · −
rrn5 · MK944407.1 · 128,388–128,508 bp · −
rrn4.5 · MK944407.1 · 128,764–128,866 bp · −
rrn23 · MK944407.1 · 128,965–131,775 bp · −
trnA-UGC · MK944407.1 · 131,941–132,817 bp · −
trnI-GAU · MK944407.1 · 132,882–133,894 bp · −
rrn16 · MK944407.1 · 134,193–135,683 bp · −
trnV-GAC · MK944407.1 · 135,910–135,981 bp · −
ycf15 · MK944407.1 · 142,295–142,543 bp · −
ycf2 · MK944407.1 · 142,634–149,479 bp · −
psbK · MK944407.1 · 7,382–7,561 bp · +
psbI · MK944407.1 · 7,954–8,064 bp · +
trnG-UCC · MK944407.1 · 8,994–9,747 bp · +
trnR-UCU · MK944407.1 · 9,930–10,001 bp · +
trnC-GCA · MK944407.1 · 27,943–28,013 bp · +
petN · MK944407.1 · 28,177–28,266 bp · +
trnT-GGU · MK944407.1 · 30,811–30,882 bp · +
psbD · MK944407.1 · 32,271–33,332 bp · +
psbC · MK944407.1 · 33,280–34,701 bp · +
psbZ · MK944407.1 · 35,374–35,562 bp · +
trnG-GCC · MK944407.1 · 35,834–35,904 bp · +
trnS-GGA · MK944407.1 · 44,752–44,838 bp · +
trnL-UAA · MK944407.1 · 46,823–47,362 bp · +
trnF-GAA · MK944407.1 · 47,661–47,733 bp · +
trnM-CAU · MK944407.1 · 51,717–51,789 bp · +
rbcL · MK944407.1 · 54,673–56,106 bp · +
accD · MK944407.1 · 56,804–58,291 bp · +
psaI · MK944407.1 · 58,777–58,887 bp · +
ycf4 · MK944407.1 · 59,335–59,889 bp · +
cemA · MK944407.1 · 60,500–61,189 bp · +
petA · MK944407.1 · 61,410–62,372 bp · +
petL · MK944407.1 · 64,981–65,076 bp · +
petG · MK944407.1 · 65,256–65,369 bp · +
psaJ · MK944407.1 · 66,100–66,234 bp · +
rpl33 · MK944407.1 · 66,685–66,885 bp · +
rps18 · MK944407.1 · 67,051–67,356 bp · +
rps12 · MK944407.1 · 137,608–138,391 bp · +
psbB · MK944407.1 · 71,422–72,948 bp · +
psbT · MK944407.1 · 73,128–73,235 bp · +
psbH · MK944407.1 · 73,533–73,754 bp · +
petB · MK944407.1 · 73,888–75,238 bp · +
petD · MK944407.1 · 75,432–76,628 bp · +
ycf2 · MK944407.1 · 85,116–91,961 bp · +
ycf15 · MK944407.1 · 92,052–92,300 bp · +
trnV-GAC · MK944407.1 · 98,614–98,685 bp · +
rrn16 · MK944407.1 · 98,912–100,402 bp · +
trnI-GAU · MK944407.1 · 100,701–101,713 bp · +
trnA-UGC · MK944407.1 · 101,778–102,654 bp · +
rrn23 · MK944407.1 · 102,820–105,630 bp · +
rrn4.5 · MK944407.1 · 105,729–105,831 bp · +
rrn5 · MK944407.1 · 106,087–106,207 bp · +
trnR-ACG · MK944407.1 · 106,451–106,524 bp · +
ycf1-fragment · MK944407.1 · 107,445–108,500 bp · +
rpl32 · MK944407.1 · 111,134–111,304 bp · +
trnL-UAG · MK944407.1 · 112,006–112,085 bp · +
ccsA · MK944407.1 · 112,178–113,155 bp · +
trnN-GUU · MK944407.1 · 127,479–127,552 bp · +
rps7 · MK944407.1 · 138,445–138,912 bp · +
ndhB · MK944407.1 · 139,241–141,394 bp · +
trnL-CAA · MK944407.1 · 141,954–142,034 bp · +
trnI-CAU · MK944407.1 · 149,568–149,641 bp · +
rpl23 · MK944407.1 · 149,807–150,088 bp · +
rpl2 · MK944407.1 · 150,107–151,589 bp · +
rps19 · MK944407.1 · 151,649–151,690 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Salvia prattii
ANNOTATED PLASTOME
MK944407.1
151,690 bp · 134 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37922 75845 113768 151690 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG ycf1-fragment rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2 rps19
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
135 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 12 86 75 Locate
psbA gene − 396 1454 1059 Locate
trnK-UUU gene − 1686 4279 2594 Locate
matK gene − 1985 3547 1563 Locate
rps16 gene − 4851 5966 1116 Locate
trnQ-UUG gene − 6931 7002 72 Locate
psbK gene + 7382 7561 180 Locate
psbI gene + 7954 8064 111 Locate
trnS-GCU gene − 8221 8308 88 Locate
trnG-UCC gene + 8994 9747 754 Locate
trnR-UCU gene + 9930 10001 72 Locate
atpA gene − 10107 11630 1524 Locate
atpF gene − 11737 12986 1250 Locate
atpH gene − 13253 13498 246 Locate
atpI gene − 14501 15244 744 Locate
rps2 gene − 15469 16179 711 Locate
rpoC2 gene − 16388 20575 4188 Locate
rpoC1 gene − 20733 23574 2842 Locate
rpoB gene − 23580 26792 3213 Locate
trnC-GCA gene + 27943 28013 71 Locate
petN gene + 28177 28266 90 Locate
psbM gene − 29243 29347 105 Locate
trnD-GUC gene − 29866 29939 74 Locate
trnY-GUA gene − 30050 30133 84 Locate
trnE-UUC gene − 30199 30271 73 Locate
trnT-GGU gene + 30811 30882 72 Locate
psbD gene + 32271 33332 1062 Locate
psbC gene + 33280 34701 1422 Locate
trnS-UGA gene − 34947 35039 93 Locate
psbZ gene + 35374 35562 189 Locate
trnG-GCC gene + 35834 35904 71 Locate
trnfM-CAU gene − 36079 36152 74 Locate
rps14 gene − 36297 36599 303 Locate
psaB gene − 36722 38926 2205 Locate
psaA gene − 38952 41204 2253 Locate
ycf3 gene − 41994 43934 1941 Locate
trnS-GGA gene + 44752 44838 87 Locate
rps4 gene − 45115 45720 606 Locate
trnT-UGU gene − 46085 46157 73 Locate
trnL-UAA gene + 46823 47362 540 Locate
trnF-GAA gene + 47661 47733 73 Locate
ndhJ gene − 48267 48743 477 Locate
ndhK gene − 48854 49531 678 Locate
ndhC gene − 49583 49945 363 Locate
trnV-UAC gene − 50888 51536 649 Locate
trnM-CAU gene + 51717 51789 73 Locate
atpE gene − 51994 52395 402 Locate
atpB gene − 52392 53888 1497 Locate
rbcL gene + 54673 56106 1434 Locate
accD gene + 56804 58291 1488 Locate
psaI gene + 58777 58887 111 Locate
ycf4 gene + 59335 59889 555 Locate
cemA gene + 60500 61189 690 Locate
petA gene + 61410 62372 963 Locate
psbJ gene − 63430 63552 123 Locate
psbL gene − 63682 63798 117 Locate
psbF gene − 63822 63941 120 Locate
psbE gene − 63956 64207 252 Locate
petL gene + 64981 65076 96 Locate
petG gene + 65256 65369 114 Locate
trnW-CCA gene − 65484 65557 74 Locate
trnP-UGG gene − 65736 65809 74 Locate
psaJ gene + 66100 66234 135 Locate
rpl33 gene + 66685 66885 201 Locate
rps18 gene + 67051 67356 306 Locate
rpl20 gene − 67610 67996 387 Locate
rps12 gene − 68808 68921 114 Locate
clpP gene − 69045 70973 1929 Locate
psbB gene + 71422 72948 1527 Locate
psbT gene + 73128 73235 108 Locate
psbN gene − 73296 73427 132 Locate
psbH gene + 73533 73754 222 Locate
petB gene + 73888 75238 1351 Locate
petD gene + 75432 76628 1197 Locate
rpoA gene − 76823 77812 990 Locate
rps11 gene − 77884 78300 417 Locate
rpl36 gene − 78410 78523 114 Locate
infA gene − 78619 78852 234 Locate
rps8 gene − 78979 79383 405 Locate
rpl14 gene − 79572 79940 369 Locate
rpl16 gene − 80072 81348 1277 Locate
rps3 gene − 81484 82146 663 Locate
rpl22 gene − 82131 82598 468 Locate
rps19 gene − 82668 82946 279 Locate
rpl2 gene − 83006 84488 1483 Locate
rpl23 gene − 84507 84788 282 Locate
trnI-CAU gene − 84954 85027 74 Locate
ycf2 gene + 85116 91961 6846 Locate
ycf15 gene + 92052 92300 249 Locate
trnL-CAA gene − 92561 92641 81 Locate
ndhB gene − 93201 95354 2154 Locate
rps7 gene − 95683 96150 468 Locate
rps12 gene − 96204 96987 784 Locate
trnV-GAC gene + 98614 98685 72 Locate
rrn16 gene + 98912 100402 1491 Locate
trnI-GAU gene + 100701 101713 1013 Locate
trnA-UGC gene + 101778 102654 877 Locate
rrn23 gene + 102820 105630 2811 Locate
rrn4.5 gene + 105729 105831 103 Locate
rrn5 gene + 106087 106207 121 Locate
trnR-ACG gene + 106451 106524 74 Locate
trnN-GUU gene − 107043 107116 74 Locate
ycf1-fragment gene + 107445 108500 1056 Locate
ndhF gene − 108469 110685 2217 Locate
rpl32 gene + 111134 111304 171 Locate
trnL-UAG gene + 112006 112085 80 Locate
ccsA gene + 112178 113155 978 Locate
ndhD gene − 113387 114928 1542 Locate
psaC gene − 115026 115271 246 Locate
ndhE gene − 115522 115827 306 Locate
ndhG gene − 116042 116572 531 Locate
ndhI gene − 116963 117469 507 Locate
ndhA gene − 117550 119644 2095 Locate
ndhH gene − 119646 120827 1182 Locate
rps15 gene − 120927 121199 273 Locate
ycf1 gene − 121616 127150 5535 Locate
trnN-GUU gene + 127479 127552 74 Locate
trnR-ACG gene − 128070 128144 75 Locate
rrn5 gene − 128388 128508 121 Locate
rrn4.5 gene − 128764 128866 103 Locate
rrn23 gene − 128965 131775 2811 Locate
trnA-UGC gene − 131941 132817 877 Locate
trnI-GAU gene − 132882 133894 1013 Locate
rrn16 gene − 134193 135683 1491 Locate
trnV-GAC gene − 135910 135981 72 Locate
rps12 gene + 137608 138391 784 Locate
rps7 gene + 138445 138912 468 Locate
ndhB gene + 139241 141394 2154 Locate
trnL-CAA gene + 141954 142034 81 Locate
ycf15 gene − 142295 142543 249 Locate
ycf2 gene − 142634 149479 6846 Locate
trnI-CAU gene + 149568 149641 74 Locate
rpl23 gene + 149807 150088 282 Locate
rpl2 gene + 150107 151589 1483 Locate
rps19 gene + 151649 151690 42 Locate
Status Available
Accession MK944407.1
Length 151,690 bp
GC content 38.0%
Annotated genes 134
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 15 Ribosomal Protein 27 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 0
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources